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Ensembl gene tree
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| <!DOCTYPE html> | |
| <head> | |
| <!-- D3 --> | |
| <script src="http://d3js.org/d3.v3.min.js" charset="utf-8"></script> | |
| <!-- TnT --> | |
| <link rel="stylesheet" href="http://tntvis.github.io/tnt.tree/build/tnt.tree.css" type="text/css" /> | |
| <script src="http://tntvis.github.io/tnt.tree/build/tnt.tree.min.js"></script> | |
| <!-- TnT Rest --> | |
| <script src="http://tntvis.github.io/tnt.rest/build/tnt.rest.min.js"></script> | |
| </head> | |
| <body> | |
| <h1>Ensembl gene tree</h1> | |
| <div id="mydiv"></div> | |
| <script> | |
| // gene tree | |
| var rest = tnt.rest() | |
| .domain("rest.ensembl.org"); | |
| var url = rest.url() | |
| .endpoint("genetree/id/:id") | |
| .parameters({ | |
| id: "ENSGT00390000003602" | |
| }); | |
| rest.call(url) | |
| .then (function (resp) { | |
| var tree = resp.body.tree; | |
| var tree_vis = tnt.tree() | |
| .data(tree) | |
| .label(tnt.tree.label.text() | |
| .fontsize(10) | |
| .height(20) | |
| .text(function (node) { | |
| var data = node.data(); | |
| if (data.id && data.id.accession) { | |
| return data.id.accession; | |
| } | |
| return ""; | |
| }) | |
| ); | |
| tree_vis(document.getElementById("mydiv")); | |
| }); | |
| </script> | |
| <footer> | |
| <aside>Released under <a href="http://www.opensource.org/licenses/apache2.0.php">Apache 2.0</a>.</aside> | |
| Copyright 2014-2016 <a href="http://www.ebi.ac.uk/~mp" rel="author">Miguel Pignatelli</a> | |
| </footer> | |
| </body> |
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