A modular D3.js-based geologic time scale that utilizes data from the Paleobiology Database. The repo can be found here.
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January 18, 2021 21:02
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Geologic Time Scale
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| <!DOCTYPE html> | |
| <html> | |
| <head> | |
| <meta charset="utf-8"/> | |
| <meta http-equiv="Content-Language" content="en" /> | |
| <meta name="viewport" content="initial-scale=1.0, maximum-scale=1.0, minimum-scale=1.0, user-scalable=no, width=device-width"> | |
| <title>Geologic Time</title> | |
| <link rel="stylesheet" href="timescale.css" /> | |
| </head> | |
| <body> | |
| <div id="geoTime"></div> | |
| <script src="http://d3js.org/d3.v3.min.js"></script> | |
| <script src="timescale.js"></script> | |
| <script type="text/javascript"> | |
| // Start | |
| timescale.init("geoTime"); | |
| </script> | |
| </body> | |
| </html> |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| { | |
| "records": [ | |
| {"oid":753,"typ":"int","nam":"Archean","lvl":1,"pid":0,"col":"#F0047F","lag":2500,"eag":4000,"rid":[15443]}, | |
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| {"oid":122,"typ":"int","nam":"Valanginian","lvl":5,"pid":40,"col":"#99D36A","lag":132.9,"eag":139.8,"rid":[47900]}, | |
| {"oid":121,"typ":"int","nam":"Hauterivian","lvl":5,"pid":40,"col":"#A6D975","lag":129.4,"eag":132.9,"rid":[47900]}, | |
| {"oid":120,"typ":"int","nam":"Barremian","lvl":5,"pid":40,"col":"#B3DF7F","lag":125,"eag":129.4,"rid":[47900]}, | |
| {"oid":119,"typ":"int","nam":"Aptian","lvl":5,"pid":40,"col":"#BFE48A","lag":113,"eag":125,"rid":[47900]}, | |
| {"oid":118,"typ":"int","nam":"Albian","lvl":5,"pid":40,"col":"#CCEA97","lag":100.5,"eag":113,"rid":[47900]}, | |
| {"oid":117,"typ":"int","nam":"Cenomanian","lvl":5,"pid":39,"col":"#B3DE53","lag":93.9,"eag":100.5,"rid":[47900]}, | |
| {"oid":116,"typ":"int","nam":"Turonian","lvl":5,"pid":39,"col":"#BFE35D","lag":89.8,"eag":93.9,"rid":[47900]}, | |
| {"oid":115,"typ":"int","nam":"Coniacian","lvl":5,"pid":39,"col":"#CCE968","lag":86.3,"eag":89.8,"rid":[47900]}, | |
| {"oid":114,"typ":"int","nam":"Santonian","lvl":5,"pid":39,"col":"#D9EF74","lag":83.6,"eag":86.3,"rid":[47900]}, | |
| {"oid":113,"typ":"int","nam":"Campanian","lvl":5,"pid":39,"col":"#E6F47F","lag":72.1,"eag":83.6,"rid":[47900]}, | |
| {"oid":112,"typ":"int","nam":"Maastrichtian","lvl":5,"pid":39,"col":"#F2FA8C","lag":66,"eag":72.1,"rid":[47900]}, | |
| {"oid":111,"typ":"int","nam":"Danian","lvl":5,"pid":38,"col":"#FDB462","lag":61.6,"eag":66,"rid":[47900]}, | |
| {"oid":743,"typ":"int","nam":"Selandian","lvl":5,"pid":38,"col":"#FEBF65","lag":59.2,"eag":61.6,"rid":[47900]}, | |
| {"oid":110,"typ":"int","nam":"Thanetian","lvl":5,"pid":38,"col":"#FDBF6F","lag":56,"eag":59.2,"rid":[47900]}, | |
| {"oid":109,"typ":"int","nam":"Ypresian","lvl":5,"pid":37,"col":"#FCA773","lag":47.8,"eag":56,"rid":[47900]}, | |
| {"oid":108,"typ":"int","nam":"Lutetian","lvl":5,"pid":37,"col":"#FCB482","lag":41.3,"eag":47.8,"rid":[47900]}, | |
| {"oid":107,"typ":"int","nam":"Bartonian","lvl":5,"pid":37,"col":"#FDC091","lag":38,"eag":41.3,"rid":[47900]}, | |
| {"oid":106,"typ":"int","nam":"Priabonian","lvl":5,"pid":37,"col":"#FDCDA1","lag":33.9,"eag":38,"rid":[47900]}, | |
| {"oid":105,"typ":"int","nam":"Rupelian","lvl":5,"pid":36,"col":"#FED99A","lag":28.1,"eag":33.9,"rid":[47900]}, | |
| {"oid":104,"typ":"int","nam":"Chattian","lvl":5,"pid":36,"col":"#FEE6AA","lag":23.03,"eag":28.1,"rid":[47900]}, | |
| {"oid":103,"typ":"int","nam":"Aquitanian","lvl":5,"pid":35,"col":"#FFFF33","lag":20.44,"eag":23.03,"rid":[47900]}, | |
| {"oid":102,"typ":"int","nam":"Burdigalian","lvl":5,"pid":35,"col":"#FFFF41","lag":15.97,"eag":20.44,"rid":[47900]}, | |
| {"oid":101,"typ":"int","nam":"Langhian","lvl":5,"pid":35,"col":"#FFFF4D","lag":13.82,"eag":15.97,"rid":[47900]}, | |
| {"oid":100,"typ":"int","nam":"Serravallian","lvl":5,"pid":35,"col":"#FFFF59","lag":11.62,"eag":13.82,"rid":[47900]}, | |
| {"oid":99,"typ":"int","nam":"Tortonian","lvl":5,"pid":35,"col":"#FFFF66","lag":7.246,"eag":11.62,"rid":[47900]}, | |
| {"oid":98,"typ":"int","nam":"Messinian","lvl":5,"pid":35,"col":"#FFFF73","lag":5.333,"eag":7.246,"rid":[47900]}, | |
| {"oid":97,"typ":"int","nam":"Zanclean","lvl":5,"pid":34,"col":"#FFFFB3","lag":3.6,"eag":5.333,"rid":[47900]}, | |
| {"oid":96,"typ":"int","nam":"Piacenzian","lvl":5,"pid":34,"col":"#FFFFBF","lag":2.588,"eag":3.6,"rid":[47900]}, | |
| {"oid":741,"typ":"int","nam":"Gelasian","lvl":5,"pid":33,"col":"#FFEDB3","lag":1.806,"eag":2.588,"rid":[47900]}, | |
| {"oid":740,"typ":"int","nam":"Calabrian","lvl":5,"pid":33,"col":"#FFF2BA","lag":0.781,"eag":1.806,"rid":[47900]}, | |
| {"oid":923,"typ":"int","nam":"Middle Pleistocene","lvl":5,"pid":33,"col":"#FFF2C7","lag":0.126,"eag":0.781,"rid":[15443]}, | |
| {"oid":922,"typ":"int","nam":"Late Pleistocene","lvl":5,"pid":33,"col":"#FFF2D3","lag":0.0117,"eag":0.126,"rid":[15443]}, | |
| {"oid":3002,"typ":"int","nam":"Holocene","lvl":5,"pid":32,"col":"#FEF2E0","lag":0,"eag":0.0117,"rid":[47900]} | |
| ] | |
| } |
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| .timescale { | |
| font-family: Helvetica, sans-serif; | |
| font-weight: 100; | |
| font-size: 0.8em; | |
| color:#333; | |
| cursor: pointer; | |
| } | |
| rect { | |
| stroke: #fff; | |
| stroke-width:1px; | |
| } | |
| .abbr { | |
| display:none; | |
| } | |
| #l0 { | |
| color:#fff; | |
| } | |
| line { | |
| stroke:#777; | |
| } | |
| .level1 { | |
| font-size: 1em; | |
| } | |
| .level2 { | |
| font-size: 0.9em; | |
| } | |
| .level3 { | |
| font-size: 0.75em; | |
| } | |
| .level4 { | |
| font-size: 0.65em; | |
| } | |
| .level5 { | |
| font-size: 0.6em; | |
| } |
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| // Via http://stackoverflow.com/questions/14167863/how-can-i-bring-a-circle-to-the-front-with-d3 | |
| // Necessary for highlighting time intervals properly | |
| d3.selection.prototype.moveToFront = function() { | |
| return this.each(function(){ | |
| this.parentNode.appendChild(this); | |
| }); | |
| }; | |
| var timescale = (function() { | |
| var data = { oid: 0, col: "#000000", nam: "Geologic Time", children: [] }, | |
| interval_hash = { 0: data }, | |
| currentInterval, | |
| dragStart, transformStart; | |
| return { | |
| "init": function(div) { | |
| var w = 960, | |
| h = 130, | |
| x = d3.scale.linear().range([0, w - 5]), | |
| y = d3.scale.linear().range([0, h]), | |
| newX = 0.01; | |
| var drag = d3.behavior.drag() | |
| .origin(function() { | |
| var t = d3.select(".timescale g"); | |
| return {x: -newX, y: 0}; | |
| }) | |
| .on("dragstart", function() { | |
| dragStart = [d3.event.sourceEvent.pageX, d3.event.sourceEvent.pageY]; | |
| transformStart = d3.transform(d3.select(".timescale").select("g").attr("transform")).translate; | |
| d3.event.sourceEvent.stopPropagation(); | |
| }) | |
| .on("drag", function() { | |
| var currentDrag = [d3.event.sourceEvent.pageX, d3.event.sourceEvent.pageY]; | |
| newX = (dragStart[0] - currentDrag[0]); | |
| d3.select(".timescale").select("g") | |
| .attr("transform", function() { | |
| return "translate(" + [ parseInt(transformStart[0] + -newX), 0 ] + ")scale(" + parseInt(d3.select(".timescale").style("width"))/961 + ")"; | |
| }); | |
| }); | |
| // Add class timescale to whatever div was supplied | |
| d3.select("#" + div).attr("class", "timescale"); | |
| // Create the SVG for the chart | |
| var time = d3.select("#" + div).append("svg:svg") | |
| .attr("width", w) | |
| .attr("height", h) | |
| .append("g"); | |
| var scale = time.append("g") | |
| .attr("id", "tickBar") | |
| .attr("transform", "translate(0,125)"); | |
| // Load the time scale data | |
| d3.json("intervals.json", function(error, result) { | |
| for(var i=0; i < result.records.length; i++) { | |
| var r = result.records[i]; | |
| r.children = []; | |
| r.pid = r.pid || 0; | |
| r.abr = r.abr || r.nam.charAt(0); | |
| r.mid = parseInt((r.eag + r.lag) / 2), | |
| r.total = r.eag - r.lag; | |
| interval_hash[r.oid] = r; | |
| interval_hash[r.pid].children.push(r); | |
| } | |
| // Create a new d3 partition layout | |
| var partition = d3.layout.partition() | |
| .sort(function(d) { d3.ascending(d); }) | |
| .value(function(d) { return d.total; }); | |
| var rectGroup = time.append("g") | |
| .attr("id", "rectGroup"); | |
| // Create the rectangles | |
| rectGroup.selectAll("rect") | |
| .data(partition.nodes(data)) | |
| .enter().append("svg:rect") | |
| .attr("x", function(d) { return x(d.x); }) | |
| .attr("y", function(d) { return y(d.y); }) | |
| .attr("width", function(d) { return x(d.dx); }) | |
| .attr("height", function(d) { return y(d.dy); }) | |
| .attr("fill", function(d) { return d.col || "#000000"; }) | |
| .attr("id", function(d) { return "t" + d.oid; }) | |
| .style("opacity", 0.83) | |
| .call(drag) | |
| .on("click", function(d) { | |
| timescale.goTo(d); | |
| }); | |
| // Scale bar for the bottom of the graph | |
| var scaleBar = scale.selectAll("rect") | |
| .data(partition.nodes(data)); | |
| var hash = scaleBar.enter().append("g") | |
| .attr("class", function(d) {return "tickGroup s" + d.lvl}) | |
| .attr("transform", function(d) { return "translate(" + x(d.x) + ", 0)"}); | |
| hash.append("line") | |
| .attr("x1", 0) | |
| .attr("y1", 7.5) | |
| .attr("x2", 0) | |
| .attr("y2", 12) | |
| .style("stroke-width", "0.05em"); | |
| hash.append("text") | |
| .attr("x", 0) | |
| .attr("y", 20) | |
| .style("text-anchor", function(d) { return (d.eag == 0.0117) ? "end" : "middle"; }) | |
| .style("font-size", "0.65em") | |
| .style("fill", "#777") | |
| .text(function(d) {return d.eag}); | |
| // Create a tick for year 0 | |
| var now = scale.append("g") | |
| .data([{x:1, y:0}]) | |
| .attr("class", "tickGroup s1 s2 s3 s4 s5") | |
| .attr("transform","translate(955, 0)"); | |
| now.append("line") | |
| .attr("x1", 0) | |
| .attr("y1", 7.5) | |
| .attr("x2", 0) | |
| .attr("y2", 12) | |
| .style("stroke-width", "0.05em"); | |
| now.append("text") | |
| .attr("x", 0) | |
| .attr("y", 20) | |
| .attr("id", "now") | |
| .style("text-anchor", "end") | |
| .style("font-size", "0.65em") | |
| .style("fill", "#777") | |
| .text("0"); | |
| var textGroup = time.append("g") | |
| .attr("id", "textGroup"); | |
| // Add the full labels | |
| textGroup.selectAll("fullName") | |
| .data(partition.nodes(data)) | |
| .enter().append("svg:text") | |
| .text(function(d) { return d.nam; }) | |
| .attr("x", 1) | |
| .attr("y", function(d) { return y(d.y) + 15;}) | |
| .attr("width", function() { return this.getComputedTextLength(); }) | |
| .attr("height", function(d) { return y(d.dy); }) | |
| .attr("class", function(d) { return "fullName level" + d.lvl; }) | |
| .attr("id", function(d) { return "l" + d.oid; }) | |
| .attr("x", function(d) { return timescale.labelX(d); }) | |
| .call(drag) | |
| .on("click", function(d) { | |
| timescale.goTo(d); | |
| }); | |
| // Add the abbreviations | |
| textGroup.selectAll("abbrevs") | |
| .data(partition.nodes(data)) | |
| .enter().append("svg:text") | |
| .attr("x", 1) | |
| .attr("y", function(d) { return y(d.y) + 15; }) | |
| .attr("width", 30) | |
| .attr("height", function(d) { return y(d.dy); }) | |
| .text(function(d) { return d.abr || d.nam.charAt(0); }) | |
| .attr("class", function(d) { return "abbr level" + d.lvl; }) | |
| .attr("id", function(d) { return "a" + d.oid; }) | |
| .attr("x", function(d) { return timescale.labelAbbrX(d); }) | |
| .on("click", function(d) { | |
| timescale.goTo(d); | |
| }); | |
| // Position the labels for the first time | |
| timescale.goTo(interval_hash[0]); | |
| // Remove the Geologic time abbreviation | |
| d3.select(".abbr.levelundefined").remove(); | |
| // Open to Phanerozoic | |
| timescale.goTo(interval_hash[751]); | |
| }); // End PaleoDB json callback | |
| //attach window resize listener to the window | |
| d3.select(window).on("resize", timescale.resize); | |
| // Size time scale to window | |
| timescale.resize(); | |
| }, | |
| "labelLevels": function(d) { | |
| // Center whichever interval was clicked | |
| d3.select("#l" + d.oid).attr("x", 430); | |
| // Position all the parent labels in the middle of the scale | |
| if (typeof d.parent !== 'undefined') { | |
| var depth = d.depth, | |
| loc = "d.parent"; | |
| for (var i=0; i<depth;i++) { | |
| var parent = eval(loc).nam; | |
| d3.selectAll('.abbr').filter(function(d) { | |
| return d.nam === parent; | |
| }).attr("x", 430); | |
| d3.selectAll('.fullName').filter(function(d) { | |
| return d.nam === parent; | |
| }).attr("x", 430); | |
| loc += ".parent"; | |
| } | |
| d3.selectAll('.abbr').filter(function(d) { | |
| return d.nam === parent; | |
| }).attr("x", 430); | |
| d3.selectAll('.fullName').filter(function(d) { | |
| return d.nam === parent; | |
| }).attr("x", 430); | |
| } | |
| }, | |
| "labelAbbrX": function(d) { | |
| var rectWidth = parseFloat(d3.select("#t" + d.oid).attr("width")), | |
| rectX = parseFloat(d3.select("#t" + d.oid).attr("x")); | |
| var labelWidth; | |
| // Doesn't work in every browser. Try to get the text length, if it fails use a default value | |
| try { | |
| labelWidth = d3.select("#a" + d.oid).node().getComputedTextLength(); | |
| } catch(err) { | |
| labelWidth = 11; | |
| } | |
| if (rectWidth - 8 < labelWidth) { | |
| d3.select("#a" + d.oid).style("display", "none"); | |
| } | |
| return rectX + (rectWidth - labelWidth) / 2; | |
| }, | |
| "labelX": function(d) { | |
| var rectWidth = parseFloat(d3.select("#t" + d.oid).attr("width")), | |
| rectX = parseFloat(d3.select("#t" + d.oid).attr("x")); | |
| var labelWidth; | |
| try { | |
| labelWidth = d3.select("#l" + d.oid).node().getComputedTextLength(); | |
| } catch(err) { | |
| labelWidth = 25; | |
| } | |
| if (rectWidth - 8 < labelWidth) { | |
| d3.select("#l" + d.oid).style("display", "none"); | |
| } else { | |
| d3.select("#a" + d.oid).style("display", "none"); | |
| } | |
| return rectX + (rectWidth - labelWidth) / 2; | |
| }, | |
| "labelY": function(d) { | |
| var rectHeight = parseFloat(d3.select("#t" + d.oid).attr("height")), | |
| rectY = parseFloat(d3.select("#t" + d.oid).attr("y")), | |
| labelHeight = d3.select("#l" + d.oid).node().getBBox().height, | |
| scale = parseInt(d3.select(".timescale").style("width"))/961; | |
| return (rectY * 0.8) + ((rectHeight - labelHeight) / 2) + 8; | |
| }, | |
| "labelAbbrY": function(d) { | |
| var rectHeight = parseFloat(d3.select("#t" + d.oid).attr("height")), | |
| rectY = parseFloat(d3.select("#t" + d.oid).attr("y")), | |
| labelHeight = d3.select("#l" + d.oid).node().getBBox().height, | |
| scale = parseInt(d3.select(".timescale").style("width"))/961; | |
| return (rectY * 0.8) + (rectHeight - labelHeight) / 2; | |
| }, | |
| // Zooms the graph to a given time interval | |
| // Accepts a data point or a named interval | |
| "goTo": function(d) { | |
| if (typeof d == "string") { | |
| var d = d3.selectAll('rect').filter(function(e) { | |
| return e.nam === d; | |
| }); | |
| d = d[0][0].__data__; | |
| } else if (d.children) { | |
| if (d.children.length < 1) { | |
| var d = d.parent; | |
| } | |
| } else { | |
| var d = d; | |
| } | |
| // Stores the currently focused time interval for state restoration purposes | |
| timescale.currentInterval = d; | |
| // Adjust the bottom scale | |
| var depth = (d.depth != 'undefined') ? parseInt(d.depth) + 1 : 1; | |
| d3.selectAll(".scale").style("display", "none"); | |
| d3.selectAll(".tickGroup").style("display", "none"); | |
| d3.selectAll(".s" + depth).style("display", "block"); | |
| // Reset panning | |
| d3.select(".timescale g") | |
| .attr("transform", function() { | |
| return "scale(" + parseInt(d3.select(".timescale").style("width"))/961 + ")"; | |
| }); | |
| // var n keeps track of the transition | |
| var n = 0, | |
| x = d3.scale.linear().range([5, 955]); | |
| x.domain([d.x, d.x + d.dx]); | |
| // "Hide" the labels during the transition | |
| // Cannot calculate the correct position if display:none is used | |
| d3.selectAll(".fullName") | |
| .style("fill", "rgba(0,0,0,0)") | |
| .style("display", "block"); | |
| d3.selectAll(".abbr") | |
| .style("fill", "rgba(0,0,0,0)") | |
| .style("display", "block"); | |
| d3.selectAll(".tickGroup").transition() | |
| .duration(750) | |
| .attr("transform", function(d) { | |
| d3.select(this).selectAll("text").style("text-anchor", "middle"); | |
| if (x(d.x) == 5) { | |
| d3.select(this).select("text") | |
| .style("text-anchor", "start"); | |
| } else if (x(d.x) == 955) { | |
| d3.select(this).select("text") | |
| .style("text-anchor", "end"); | |
| } | |
| return "translate(" + x(d.x) + ", 0)"; | |
| }); | |
| // When complete, calls labelTrans() | |
| d3.selectAll("rect").transition() | |
| .duration(750) | |
| .each(function(){ ++n; }) | |
| .attr("x", function(d) { return x(d.x); }) | |
| .attr("width", function(d) { return x(d.x + d.dx) - x(d.x); }) | |
| .each("end", function() { if (!--n) { timescale.labelTrans(d); }}); | |
| }, | |
| "labelTrans": function(d) { | |
| // var n keeps track of the transition | |
| var n = 0, | |
| x = d3.scale.linear().range([0, 955]), | |
| y = d3.scale.linear().range([0, 120]); | |
| x.domain([d.x, d.x + d.dx]); | |
| // Move the full names | |
| d3.selectAll(".fullName").transition() | |
| .duration(10) | |
| .each(function(){ ++n; }) | |
| .attr("x", function(d) { return timescale.labelX(d); }) | |
| .attr("height", function(d) { return y(d.y + d.dy) - y(d.y); }) | |
| .each("end", function() { if (!--n) { timescale.labelLevels(d); }}); | |
| // Move the abbreviations | |
| d3.selectAll(".abbr").transition() | |
| .duration(300) | |
| .each(function(){ ++n; }) | |
| .attr("x", function(d) { return timescale.labelAbbrX(d); }) | |
| .attr("height", function(d) { return y(d.y + d.dy) - y(d.y); }) | |
| .each("end", function() { | |
| if (!--n) { | |
| timescale.labelLevels(d); | |
| d3.select("#l0").style("fill", "#fff"); | |
| } else { | |
| d3.selectAll(".fullName").style("fill", "#333"); | |
| d3.selectAll(".abbr").style("fill", "#333"); | |
| } | |
| }); | |
| timescale.resize(); | |
| }, | |
| // Highlight a given time interval | |
| "highlight": function(d) { | |
| d3.selectAll("rect").style("stroke", "#fff"); | |
| if (d.cxi) { | |
| var id = d.cxi; | |
| d3.selectAll("rect#t" + d.cxi).style("stroke", "#000").moveToFront(); | |
| d3.selectAll("#l" + d.cxi).moveToFront(); | |
| } else if (typeof d == "string") { | |
| var id = d3.selectAll('rect').filter(function(e) { | |
| return e.nam === d; | |
| }).attr("id"); | |
| id = id.replace("t", ""); | |
| } else { | |
| var id = d3.select(d).attr("id"); | |
| id = id.replace("p", ""); | |
| } | |
| d3.selectAll("rect#t" + id).style("stroke", "#000").moveToFront(); | |
| d3.selectAll("#l" + id).moveToFront(); | |
| d3.selectAll(".abbr").moveToFront(); | |
| }, | |
| // Unhighlight a time interval by resetting the stroke of all rectangles | |
| "unhighlight": function() { | |
| d3.selectAll("rect").style("stroke", "#fff"); | |
| }, | |
| "resize": function() { | |
| d3.select(".timescale g") | |
| .attr("transform", function() { | |
| return "scale(" + parseInt(d3.select(".timescale").style("width"))/961 + ")"; | |
| }); | |
| d3.select(".timescale svg") | |
| .style("width", function() { | |
| return d3.select(".timescale").style("width"); | |
| }) | |
| .style("height", function() { | |
| return parseInt(d3.select(".timescale").style("width")) * 0.25 + "px"; | |
| }); | |
| }, | |
| /* Interval hash can be exposed publically so that the time scale data can be used | |
| for other things, such as maps */ | |
| //"interval_hash": interval_hash, | |
| // Method for getting the currently zoomed-to interval - useful for preserving states | |
| "currentInterval": currentInterval | |
| } | |
| })(); |
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