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Ensembl gene tree
Raw
README.md

TnT example showing the Ensembl gene tree for BRCA2. The protein sequence conservation is shown in the right panel. At a given zoom level also the actual protein sequences are revealed. The red lines indicate exon boundaries.

Raw
ensembl_genetree.js
var render = function() {
"use strict";
var height = 30;
var tree = tnt.tree();
var board = tnt.board();
var sequence_feature = function () {
var fontsize = 10;
// 'Inherit' from tnt.board.track.feature
var feature = tnt.board.track.feature()
.index (function (d) {
return d.pos;
});
feature.create (function (new_nts, xScale) {
var track = this;
new_nts
.append("text")
.attr("fill", track.color())
.style('font-size', fontsize + "px")
.attr("x", function (d) {
return xScale (d.pos) ;
})
.attr("y", function (d) {
return ~~(track.height() / 2) + 5;
})
.style("font-family", '"Lucida Console", Monaco, monospace')
.text(function (d) {
return d.nt;
})
.transition()
.duration(500)
.attr('fill', feature.color());
});
feature.move (function (nts) {
var xScale = feature.scale();
nts.select ("text")
.attr("x", function (d) {
return xScale(d.pos) ;
});
});
return feature;
};
var theme = function (ta, div) {
var label = tnt.tree.label.text()
.text(function (node) {
if (node.is_leaf()) {
return node.property(function(d) {
return d.id.accession;
});
} else {
return "";
}
})
.fontsize(10)
.height(height);
var rest = tnt.board.track.data.ensembl;
d3.json('ENSGT00390000003602.json', function (err, resp) {
deploy_vis(resp);
});
// TREE SIDE
var deploy_vis = function (tree_obj) {
tree
.data (tree_obj.tree)
.layout (tnt.tree.layout.vertical()
.width(430)
.scale(false)
)
.label (label);
var reduce = tnt.utils.reduce.line()
.smooth(4)
.redundant(function (a, b) {
return Math.abs (a-b) < 0.2;
})
.value("val");
var reduce_all = function (rows) {
var obj = {};
for (var id in rows) {
if (rows.hasOwnProperty (id)) {
obj[id] = reduce(rows[id]);
}
}
return obj;
};
var filter_exon_boundaries = function (data, loc) {
var sub_data = [];
var from = loc.from;
var to = loc.to;
for (var i=0; i<data.length; i++) {
var item = data[i];
if (item.loc >= loc.from && item.loc <= loc.to) {
sub_data.push(item);
}
}
return sub_data;
};
var get_conservation = function (seqs) {
var conservation = {};
for (var k=0; k<seqs.length; k++) {
conservation[seqs[k].data()._id] = [];
}
for (var i=0; i<seqs[0].data().sequence.mol_seq.seq.length; i++) {
var cons = {};
for (var j=0; j<seqs.length; j++) {
var p = seqs[j].data();
if (cons[p.sequence.mol_seq.seq[i]] === undefined) {
cons[p.sequence.mol_seq.seq[i]] = 0;
}
cons[p.sequence.mol_seq.seq[i]]++;
}
for (var l=0; l<seqs.length; l++) {
var val = cons[seqs[l].data().sequence.mol_seq.seq[i]] / seqs.length;
conservation[seqs[l].data()._id].push({
pos : i,
val : val
});
}
}
return reduce_all (conservation);
};
var get_boundaries = function (nodes) {
var boundaries = {};
for (var i=0; i<nodes.length; i++) {
var leaf = nodes[i];
var this_boundaries = [];
var bs = leaf.data().exon_boundaries.boundaries;
for (var j=0; j<bs.length; j++) {
this_boundaries.push({loc: bs[j]});
}
boundaries[leaf.id()] = this_boundaries;
}
return boundaries;
};
var get_aln_gaps = function (nodes) {
var gaps_info = {};
for (var i=0; i<nodes.length; i++) {
var leaf = nodes[i];
var this_no_gap_start;
var this_no_gaps = [];
var g = leaf.data().sequence.mol_seq.seq;
for (var j=0; j<g.length; j++) {
if (g[j] !== '-') {
if (this_no_gap_start === undefined) {
this_no_gap_start = j;
}
} else {
if (this_no_gap_start !== undefined) {
this_no_gaps.push( {start : this_no_gap_start,
end : j
});
this_no_gap_start = undefined;
}
}
}
gaps_info[leaf.id()] = this_no_gaps;
}
return gaps_info;
};
var get_seq_info = function (nodes) {
var seq_info = {};
for (var i=0; i<nodes.length; i++) {
var leaf = nodes[i];
var this_seq = [];
var s = leaf.data().sequence.mol_seq.seq;
for (var j=0; j<s.length; j++) {
this_seq.push({pos : j,
nt : s[j]
});
}
seq_info[leaf.id()] = this_seq;
}
return seq_info;
};
var leaves = tree.root().get_all_leaves();
var conservation = get_conservation(leaves);
var exon_boundaries = get_boundaries(leaves);
var aln_gaps = get_aln_gaps(leaves);
var seq_info = get_seq_info(leaves);
// TRACK SIDE
board
.from(0)
.width(300);
var track = function (leaf_node) {
var leaf = leaf_node.data();
var id = leaf._id;
return tnt.board.track()
.color("#EBF5FF")
.data (tnt.board.track.data.sync()
.retriever (function (loc) {
var seq_range = (loc.to - loc.from) <= 50 ? seq_info[id].slice(loc.from, loc.to) : [];
return {
'conservation' : function (d) {
return conservation[id] || [];
},
'boundaries' : filter_exon_boundaries(exon_boundaries[id], loc) || [],
'sequence' : seq_range
};
})
)
.display( tnt.board.track.feature.composite()
.add ('conservation', tnt.board.track.feature.area()
.color("steelblue")
.index(function (d) {
return d.pos;
})
)
.add ('boundaries', tnt.board.track.feature.vline()
.color("red")
.index(function (d) {
return d.loc;
})
)
.add ('sequence', sequence_feature()
.color("black")
.index(function (d) {
return d.pos;
})
)
);
};
var max_val = d3.max(leaves, function (d) {
return d.data().sequence.mol_seq.seq.length;
});
var axis_top = tnt.board.track()
.height(0)
.color("white")
.display(tnt.board.track.feature.axis()
.orientation("top")
);
var axis_bottom = tnt.board.track()
.height(18)
.color("white")
.display(tnt.board.track.feature.axis()
.orientation("bottom")
);
ta.tree(tree);
ta.top(axis_top);
ta.bottom(axis_bottom);
ta.board(board
.to(max_val)
.max(max_val)
.zoom_out(max_val)
.zoom_in(30)
);
ta.track(track);
ta(div);
};
};
return theme;
};
Raw
ENSGT00390000003602.json
{"tree":{"events":{"type":"speciation"},"branch_length":0,"children":[{"events":{"type":"speciation"},"branch_length":0,"children":[{"events":{"type":"speciation"},"branch_length":0.141044,"children":[{"events":{"type":"speciation"},"branch_length":0.137872,"children":[{"events":{"type":"speciation"},"branch_length":0.183219,"children":[{"events":{"type":"speciation"},"branch_length":0.007354,"children":[{"events":{"type":"speciation"},"branch_length":0.196061,"children":[{"exon_boundaries":{"boundaries":[28,138,163,195,208,246,284,307,685,2766,2800,2831,3003,3065,3128,3186,3314,3368,3419,3465,3535,3592,3651,3742,3811],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MDSCIQN---MYDAFKDEIWK--ELGPLDPNWFEVLTAQASLNEGN---VADNDE--LCANQEGYFKVPLEKTAVESQLFSTPKVFRHCQIV---SP------------------------DTEDDTSFTAAQEKEMLPWMPTQSPCLFQP---PKLCVSNLKCEGVQPQTE----------A----SFDLLHSPE--KSP-ASYANHISESLGAQINPDISWTSSFNTPRALPSTLILSKTDESPCPESVTADR--KVVFV-----------------RKLFPSLSNSSLNTSR-TSLGPVFPVTDTCSKSPLNQSESHQQQ---K------VPDALEG-DVCSADAPR----------SFFANSSSAL-RKVKPDR--VKRKQIIQTNV---DVC----SHEDTSKSDNAASSEEDLESGGLPSTTLVK-------TGDTA------------ISQWSPLSLSE-ISSSAVGSNM----TLPGYTDSVQPTRPTLKITD-------------------------------------------------------------------------SGFTQKKRKFVYTITTTKSQA----------------------------------------------------------CGQDFQTTDPS---LKI----SESEQENGKPFVNTPDKEECQRTKNQRNIVEETINCSL-------------------------------------------------------GTKLQDIDMSQLCRDFAQDFSQMTDLKTGENTQRNFSP-----AACLSAMKQTKQNGKPAN---FPNDYSCISKNRCIPTSNQP-----------------------------------------------FSISEVTMIDSGFQS--GVADVTHMTSSSFGLPL-LE-------NVGQ--NQPKQSFKTGMHN-------------FPSTNGSGKPKFDVEVPVQRSGTGQ----------A------------PDHAKEIELHIASISTEELWDREE-------TVGESKSSQP--------------------------------------------------------------------------------QTTPV----------S---LLPADAS-----GFKTASNKGIHISHANLEKAKRFFEATEDK--------------------------KSS---------LDNSTKSYHGIIYKSNSICEKTTDTSSDSSLPA-------------------------------CAGKSF-------GNVSSQLTASEKADVTELCSLLEEADSQFEFTQFKSTKKLPNHQDNHNP---PQKEDKDLDPALADIDFDDSFSSEGGKHSTVMMNDKVASVLENRTHGETAKAINRCTG-----MSDLLKTETHLNSLSGTISEEREFLKLDEPNILPRAEDTETRYLENNKALIHSEAFRTAGGN-VLHVSKKCLNKAKALFAD-------LERNLTD-------------QKLSDKQNGKNAAITEQKCNRDSDTFRKDSERKKE-----NWDVGSKIEN--CFS-KLEGVVCSNKNVGNRNDTKS-VKNNEIDTIICENGFRKASGKGISISANYMQEADAFFKDCHVMEHKEGKKSFSNFKSPQVSISKKSVTRCTELENVNTAMVSHHTKERRLN----EVERNSKFT---AALKNEDGKSFPTSKP-FAMLHPSKSTDLSAFEELCAGDGFCTAAGKNISVSAAAMKKDESLLNQIHAPEEINKETNEKENASKTKCLGDELSNLDAGGFQVVNGKKFAISSAPLKKATLLRESDKSEDAICISSQQSSPKTPVIPVTNLW---SGGFSAASGKPVVLSSVALEKTQTLVSDISLNMDKVAESAPVKKDKKHQTEPEKI--CSGFTTAGGANDQMSQEKFDDLILAKAVQ--EEDALSTDGVLESNNVMLESVGSKKEDEKPHADQRFR-THTPVEAVKGCFKDADK--QEKHKENLLPQASCGFKTASGKKVEVSFEALKKAENLLGDCVGVMDRVNAALPESKAIDLPVRNDGFQSASGKPVALSSEALQKAKSLFSDIGFRAEDPDTSQMRKSGKNQDGSNNTEKMSCGF--TTARGEKVDVLQKN--LQKAKALFKELDDQVLSKAAQEEDAFFAGCDMDINKEMLENDLKDKVHMQRSRKASLAKCYTDD--EMRVSISIPECSSNANKQVEQRENILPQASRGFQTASGKRVDVSSEALKKAETLFSE---FEGIQDKTNAMSSQSQSSALSLRNCGFHSASGKPM-----A-----SSTEAVQKAKSLFCDITSSM---------------------------EDSDFSQTVKADGKQDSRSKTQKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLALTKAMQDTDPFFNQEEGWTMDSNSEKSSEQTNTAPVNESGSI------------KGNMS----ELRTNTGSICEEPESGSIKAKQNEGGFQTASGKTVAVSAEALSRAK--------LL---------LSENKVDEESTCVCATSGKPFSHEALQKAKTYFSSGVESLPSAADSRSDD--HIEEKSHLSICNLNTKSCNQRSDI---IQTNKSSDPKFQLLNLT--------GCTETQQKFLAQE-ALDCTKALLEDEVLVGQ------SLLTTSEDLQLLDDQH-LNKKSAEEDKGRKR--------RRAEDLIAQPPSKRRLLEEFDRTAENSRGSGLHPVKSGPNGIM-DRGVFRCGAFLHPNITKP--NRDAK------SFVHTRLQRTI-----QMPHSDQGDGRSVACR---MPTFVPPFFK---NSKRDALN---------KPEARDCKKVPAFVPPFKKQRVVHEESSPKQQEDNKQHHSLCLETNSKTDAPLTKTTQNC-EEVVTLVNTPNTKMINQSVPLKVGSVSSTEMLHVDDKLSRSQDRTENIGLARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVA-RIPLKVAVNGNIPSRYSAQELYECGVHKYVPEITGENAESFRFNLLQFVKQEMLADGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTAGVDPKLISEQWVYNHYRWIVWKQASMEKSFPETMGSLCLTPEQVLLQLKY-RYDVEVDHSRRPALRKIMERDDTPAKTLVLCVCEIISKGQLLHAQICSDTKMSQS---AKTKVETPVAVVRLTDGWYAIKAQLDEPLTAMLHKGQLAVGGKLIIHGAQLMGPQDGCSPLEAPDSLMLKIWSNSTRRARWDAKLG--FHTDPRPFLLPVSCLYSNGGPIGCVDIVILRSYPMQWMERKSDGGVVFRSARAEEKEARRFNSHKQKAVELLFAKVQAEFEKE-EEGSIKCQRRR--QMVG--KQDIGNLQEGEDLYEALGD--DPAYLE--AHLSEQQLESLQAYRRSLMEKKQAELQDRYWRALD-AEDNEMSCPKRDVTPVWRLCIADSRIQSSCVVYQ---LNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKPSNVETVQLTGTKKTQFQELQVSQEWVSSHFRQRISTDFVNLQNEEFKPLCGEVDLTGLVISVVDQQ------------GSSPAFYLVDGKKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQ----SIHPTPVLYAGDLTVFSTNPKEIHLQESLDQLRNVVQ-GQDNFFLTAEEKLAHSIKSDGSCSSS------LQPEMPVAA--------------------RRQDSKTNVAFLKPIKSLGSFTP-------VSSNLPAATSSIEK----DPKSLKRKR-ALDYLCRIPSPPPIFPLASVVSP-CVKKTFNPPRRSG-P----PSTLKPATIKATD---------------SLVEDEWVNDEELAMIDTQALHVGNLF-----------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"JH556673.1:699224-714770","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSXMAP00000006983"}]},"branch_length":0.250602,"id":{"source":"EnsEMBL","accession":"ENSXMAG00000006974"},"taxonomy":{"scientific_name":"Xiphophorus maculatus","id":8083}},{"exon_boundaries":{"boundaries":[2898],"number_of_exons":2},"sequence":{"mol_seq":{"seq":"----M-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVKQQTL---------------------------------------------------------------------------PLSSDKKD---------QSKVTLQKPIR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPGSVTP----------------------------VSKNPQA-----------------------------------------------------------------------------ETSSTKK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPKILKRRR-ALDYLSRIPSPPPLSVLDSVSSP-CVKKTFNPPRRSG-T----AN--------------EFRTEKAIKPTDSLVEDQWVNDEELVMIDAQALHVGGLM-----------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"13:7906488-7907361","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSORLP00000004773"}]},"branch_length":0.577127,"id":{"source":"EnsEMBL","accession":"ENSORLG00000003832"},"taxonomy":{"scientific_name":"Oryzias latipes","id":8090}}],"confidence":{"value":34,"type":"boostrap"},"taxonomy":{"scientific_name":"Atherinomorpha","id":32456}},{"exon_boundaries":{"boundaries":[3047,3123,3181,3219,3309,3363,3424,3460,3531,3587,3646,3737,3789],"number_of_exons":14},"sequence":{"mol_seq":{"seq":"----L--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNVELAQDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVT-RIPLKAAL-------VFLLQLYRHGVHQHVCEISSETAESFRFNLKQFIKREALLDGGGVQLADGGWLIPSKDGTAGKEEFYRALCDTPGVDPKLISDGWVDNHYRWVVWKQASMERSFPETMGGLCLTPEQVLLQLKY-RYDVEVDHSRRPALRRITERDDTAAKTLVLCVCGVVSRSF-------DDSKTPRG---ADAGGGNPSAVVWLTDGWYAIRAQLDEPLTAMLRNGRVAVGSKLIVHGAQLVGSQEACSPLEAPEALMLKICANSSRPVRWDAKLG--FHKDPRPFLLPLSCLYSSGGQVGCVDMIVLRSYPIQWMERKPEGGVVFRSVRAEEKEAKRFNGLKQKAMEILFAKIQDEFEKE--DKGRTCDFTT--QAIS--RQAIAGLQAGEELCEAVGE--DPAHLE--ALLSEQQVETLNTYRRCVMEKKQAQLHDRFQRALESAEASEGSCPKREVTPVWRLGVADSRDQRGR-VYQ---LNLWRPSSDLQALLKEGRRYKVYNLTTSDGKKHNGSSNVQLTGTKKTQFQDLQASREWLSTRFQPRVSACFVDLQNPEFQSLCGEVDLTGFVIQIVDGQ------------GFSPAFYLADGELNFVKVRCFSSFAQSGLEDLVKPRVLLSLSNLQLRGQ----SASPTPVVYAGDLTVFSANPKDAHLQESLSQNKNLRQ-SQENFFLIAEETLSRLVQSDGRRPLSSPALHTRTPALATSMIQDTTASVKCV--LLMQGASQQLV-----------RSRGTFTP-------VSRKPPAANCSTEK----DAGSVKRRR-ALNYLSHIPSPPPLLNLGSVASP-CVNKTFNPPRRSG----------TPSTLKTVQ-----TPAHKAQKVDSLVEDEWVNDEELAMIDTQAL-----------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"groupI:13362884-13366744","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSGACP00000015199"}]},"branch_length":0.150089,"id":{"source":"EnsEMBL","accession":"ENSGACG00000011490"},"taxonomy":{"scientific_name":"Gasterosteus aculeatus","id":69293}}],"taxonomy":{"scientific_name":"Smegmamorpha","id":129949}},{"events":{"type":"speciation"},"branch_length":0.041197,"children":[{"events":{"type":"speciation"},"branch_length":0.206875,"children":[{"exon_boundaries":{"boundaries":[3060,3123,3181,3309,3363,3413,3460,3531,3587,3646,3737,3795,3807],"number_of_exons":14},"sequence":{"mol_seq":{"seq":"----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLARDMQDMRIRKKKRQTIRPLPGSLFQKKSSGVA-RIPFKAAVNGKPPARYTAKPLCGLGVPLNVLEITSETAESFRFSLQHFVKLESLIDKGGIQLADGGWLIPTNDGTAGKEEFYRALCDTPGVDPKLMSEEWVYNHYRWIVWKQASMERSFPEEMGSLCLTPEQVLLQLKY-RYDIEVDHSRRPALRKIMEKDDTAAKTLVLCVCGVVFRGSSPKNKSFGDISTPGA---DPKVEN-PCAVVWLTDGWYSIKAQLDGPLTSMLHRGRLPVGGKLIIHGAQLVGSENACSPLEAPVSLMLKICANSSRPARWDSKLG--FHRDPRPFLLPVSSLYSSGGPVGCVDIIILRSYPILWMERKPEGGTVFRSGRAEEKEARRYNIHKEKAMEILFDKIKAEFEKEEKGNRKPQCR----RTIN--GQNITSLQDGEELYEAVGD--DPAFLE--AHLTEKQVEVLQNYKRLVMEKQQAELQDRYRRAVESAEDGVGGCPKRDVAPVWRLCIADSMGHSGR-VYQ---LSLWRPPSELQALLKEGCRYKVYNLTTLDSKKQGGNATVQLTATKKTQFEHLQGSEEWLSKHFQPRVATNFVRLQDPEFNPLCSEVDLTGYVITIIDGQ------------GFSPAFYLADGKQNFVKVRCFSSFAQSGLEDVIKPRVLLALSNLQLRGQ----STSPTPVVYAGDLTVFSTNPKEVHLQESFSQLKTLVQ-GQENFFVHAEEKLSQLMSDGLSAIASPAGQIQTPASTVKRR--------GDM--TDVSSNIMVINKTSKVTCQQPGRSHRFSTP-------INRNSTAHSSAE-R----NPSTIKKRK-ALDYLSHIPSPPPLSCLSTLSSP-SVKKIFIPPRRT----------EIPGTLKTVKTP-NQKPSN------TPVDDQWVNDEELAMIDTQAL-----------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"scaffold_19:196046-199577","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSTRUP00000015030"}]},"branch_length":0.074633,"id":{"source":"EnsEMBL","accession":"ENSTRUG00000006177"},"taxonomy":{"scientific_name":"Takifugu rubripes","id":31033}},{"exon_boundaries":{"boundaries":[2686,2706,2796,2820,2828,3001,3062,3125,3183,3311,3365,3416,3462,3533,3589,3648],"number_of_exons":17},"sequence":{"mol_seq":{"seq":"----V-----------------------------------------------------------------------------------------------------------------------------------------------------------------SFSSDTPRKP----------K-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSLSS-------------------EFT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRFLAQE-ALDCTKALLEDERLVD--------DPHMTGECLHRCPQF----SLLVNLFVKPH---------TAVLIPEQPPLKRRLLEEFDRTDGSSRGSALNPEKCSPNGIMGDRRVFKCSVSFQPNITTPHRICSQKAERPVSFLSRRSGTNYVETSLPNTTPTKVSALRDSNEARLQKSNFIPPFIK---------NV---------KLDTPNSKTASTFVPPFKKSRNSS-------KTEEEEPKHHFIPPFTNP------------CATSSTKKHTA-------------------------------GHLHNVELARDMQGMRIRKKKRQTILPLPGSLFLKKSSGVT-RIPLKSAVNGKPPARYTPKQLYGLGVPLNVLEITSETAGSFRFSLQQFVKLESLTDKGGIQLADGGWLIPRNDGTAGKEEFYRALCDTTGVDPKLISEEWVYNHYRWIVWKQASMERSFPEQLGSLCLTPEQVLLQLKY-RYDIEVDQSRRPALRKIMERDDTAAKTLILCVCGVVSRGSSPQKQGLGGVAAPSS---DPQVEN-PFAVVWLTDGWYSIKAQLDGPLTSMLNRGRLPVGGKLIIHGAQLVGSQDACSPLEAPESIMLKIFANSSRRARWDAKLG--FYRDPRPFLLPVSSLYNSGGPVGCVDIIILRSYPTLWMERKPEGGTVFRSGRAEEKEARRYNVHKEKAMEILFDKIQAEFEKE-ERDNRKPRSRR--RTIG--DQDIKSLQDGEELYEAVGD--DPAYLE--AHLTEQQAETLQNYKRLLIEKKQAELQDRYRRAVETAEDGTGSCPKRDVAPVWRLSIADFMEKPGS-VYQ---LNIWRPPSELQSLLKEGCRYKVYNLTTTDSKKQGGNTTVQLSGTKKTQFEDLQASEELLSTYFQPRVSATFIDLQDPEFHSLCGEVDLTGYVISIIDGQ------------GFSPAFYLTDGKQNFVKVRCFSSFAQSGLEDVIKPSVLLALSNLQLRGQ----ATSPTPVLYAGDLTVFSTNPKEVHLQESFSQLKTLVQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"16:4700614-4705074","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSTNIP00000002435"}]},"branch_length":0.104054,"id":{"source":"EnsEMBL","accession":"ENSTNIG00000016261"},"taxonomy":{"scientific_name":"Tetraodon nigroviridis","id":99883}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Tetraodontidae","id":31031}},{"exon_boundaries":{"boundaries":[28,138,163,191,208,246,274,297,725,740,1376,1419,1568,1803,1976,2006,2123,2191,2226,2343,2598,2770,2803,2830,2948,3004,3070,3133,3191,3319,3373,3426,3470,3537,3597,3653,3746,3826],"number_of_exons":39},"sequence":{"mol_seq":{"seq":"----M----------YETFKDEIWK--ELGPLDHNWFDILTAQTSANEGG----SGSDQDELCANQEGHFKTPLDKTAVDSQLFSTPRVFRHSRIV---SP------------------------EIEDGQSFSTTQENDTSPWTETQSPYLFQM---SKKGVSDTKYEEIQPQSQ----------DSFDPLDTPHKSPM-------SYAKHISESLGAQINPDISWTSSLNTPPPVPSTLILSKVDESPCPVSVSVDK--SVVFV-------RKLFPSLSNPSRIVVAPPKNALSSTD---------AVLPEVVSSQTLLTQNEGIWQQT------LRGANGDGKICSTVASA-PDEFQNASSTFLANSSSAL-RKVKPDRIRWKQFKLSEHDC---SST-DI-SKTNQSNEEHKADEEHSTIPSSPLAKNGST-------A----------------ISQWSPLNLS------------------EIPPCTAENNILTELQPD-------------------------------------------------------------------------FDPRQLVRPPI------------------------------------------------------------------------------K---ITD----TGFIRKKRKFVYTVE---TLKPKVKENETDFQKMNASSGIPDTVKIEVFLFSTVTEKFSSFLLGPE------LSSKQSEDAPDEASCCSNERNAEEKQEKSTLENLPSSVQEKVQDLDM--SQLHKDFAQD-------------FSQISDSGRRTEGVAEDQNHFSPSACLLAMKKA------------KH------QTKQASLHHDY----------------NSISNTGHMSTTNQN-YSTNE---GTISDSGFQSAVA-------DITHTASSCIVPCSENTGS---------------------KTDIHRTTPFPSTHRGN---EKSQLKER------------QTIDSERECQLDMESTLTQLPSSL-KGTDDGLNWIPQNGQV--------------------------------------------------------------------------------HGRLL----------E---KTGVSLPPAHASGFKTASNKGIQISLANLEKARNLFEERDGD-------------------------------------------QPTKCNSATKHKNSQSNGSMKSTVSVSNQ----------------------------QTSVSERF-------EGISCHLTASQKADVTELCTLLEEADSQFEFTQFRG-----AEVKQPCQKTDKDLDP----DFLADIDFDDSFSSDAEKHFAITAMPDKM-TRENISAGDVLSSSENIPG--RSNWLISTKQKSLHRAEHGEASKMEKPNPLMLSV-----------------------AFKTAGGN-ALRVSKTCLSKARALFAD---LEINVSDLNRS-----HKQAAETGAKSKKMC--NVDSETATDTKQPVSALKQARNMQDK-----DTTKSFEICK--KDA-IVNIEFENVNSGLSRPHPDD-IEMKSVGCN-----------------------TVLEFKNPVSFHETPFSTSKLLPCPASKSIDSSAISELSSGYGFCTASGKTVSV---------SADAMKKAKCLLNDTYTLEDTSKKISQKENALRTAQLTAQNKESIPKTS--GFDTATGKGVSISSTAHKKAKCPLSESDKDFEDSVLTNAMQE--------TVDCDIDVNNGGNIVH-----------ISGSDSDLGIRPDQRVTSNISVESANKQVKQKDSLPLKSGGFGPVSGKGVSISSEALNRATSLLG-QCDEVNNKINVNQSHLKTSVYSPLPT---SGGFHAASGKALTLSSEALQKAKTLFSDC--REPSCSTHT-------EHKKLCKVWKWMRSGKPSCSK-TPVPENG--------------------------GFLAASGKPVALSSEALQKAKTLFSDIISSAESPHAKNEMQS------------------------------------GFKTASGKK---------VHVSQKDLLNAKHL--LKDL--------DDSVFTKAMQMAEDCDMDLQTASGKG-VTIASEALRKARSLLGECDEVEDKIVHDSLPQN----------------------------------------GGFCAASGKPVALSSEALERAKALFGDIGISAEIPHAKNSHKKYDYGENTWKMQCSSKTVGEKDSGN-GCT-----EVTNEHMKQKNTWPQQSVGFQTASGKGVAVSSEALKRAKTLLSECE-GVEDKISITAPQGKISAHGPPFRSSG-FLAAGVKPVALSSEAMQKAKALFSDI---------SQSRDTPAVAHTRKNDKKIDAHNGEEMH-------------------------C----GFSTAGGVKVQVSKKSLLKATSLFKEFD--------------------------------------DGECHDSLLFSTSPQDYEINKESSTKES-----------------------KILKPNESSVLN-------------------------FQSLNLT--------GCTETQQEFLAQE-ALDCTKALLEDEGLADH------NLLMALENMPLQHNTSADGCQESEKRRGKRS--------VEETEMNGQPPLKRRLLEEFDRSLIDPKASTLHPVKSCSNGLMKDRGVFKYSTSLYPNITRP---HRFQKTPQIQNSTMGDP-------RSKSAHYKT-------------SAFVPPFVRN--AKTETHKN---------MVLKDSIRTPSAFVPPFKKQRTIV-------------------QPTKKTQSDADGTA----VAPAQSDDMNNQSLPVDFRSDSAGGETSGVDGTCSRSQADVYWNLQNTELAQDMQDMRIRKKKRQNIRPLPGSLYLKKTSGVP-RIPLKAAVNGKIPGRYTPKKLYGYGVQKYVSDITSENAESFRFNLLQFIKREAFTDEGGVQLADGGWLVPSNDGTAGKEEFYRALCDTLGVDPKLISEAWVYNHYRWIVWKQASMEKSFPEIVGSRCLTPEQVLLQLKY-RYDVEVDHSCRPALRKIMEKDDTAAKTLVLCVCEIISRGHSPKTQSHNDTKTPHS---ADAKVETSAALIWLTDGWYAIKAQLDEPLTAMVHKGRLAVGGKLIIHGAQLVGSQDACSPLEAPESLMLKICANSCRPARWDAKLG--FHKDPRPFLLPISCLYSNGGPVGCVDIVVLRSYPMQWMERKPDGSVVFRSSRAEEKEARRYNSHKQKAMEILFAKIQSQFENE-EKGNIKQQRRR--KTIS--HQEIANLQDGEELYEAVGD--DPAYLE--THLSAQQLEALHTYRCSLMEKKQAELQDRYHRALE-AEDNEMNCPKREVTPVWRLCIADSMELPGRVLVLVYQLNLWRPSSDLHSLLKEGCRFKVYNLTTSDGKKRSSIEAVQLTGTKKTQFQELQASHEWLSTYFQPRVCTNFVNLQNPDFEPLCGEIDLAGYVITVVDGKNT----------GSSPAFYLADEKLNFVKVRCFSSLSQTGLEDVVKPRVILALSNLQLRGQ----SMHPTPVVYAGDLTSFSTNPKEVHLQESFSQLKTLVQ-CQENFFLTAEEKLSELVRSNGLSSSSSPA-------------------------LQRQTPASLTDRRQDIKSSKPGRNLGSFTP-------VGRKSPTPTSSGEK----DPKSLKRRR-AQDYLSRIPSPPPLSHLGSVASP-CVNKTFNPPRRSV----------TPSTLKTVQTP-SHKPAD------SLGEDEWVNDEELAMIDTQALRVNLI------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"GL831218.1:289993-303706","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSONIP00000006940"}]},"branch_length":0.306909,"id":{"source":"EnsEMBL","accession":"ENSONIG00000005522"},"taxonomy":{"scientific_name":"Oreochromis niloticus","id":8128}}],"confidence":{"value":9,"type":"boostrap"},"taxonomy":{"scientific_name":"Percomorpha","id":32485}}],"taxonomy":{"scientific_name":"Percomorpha","id":32485}},{"exon_boundaries":{"boundaries":[3047,3094,3100,3124,3182,3228,3230,3234,3240,3278,3281,3311,3365,3441,3462,3533,3588,3647,3727,3731,3735,3736,3855,3910,3915,3932],"number_of_exons":27},"sequence":{"mol_seq":{"seq":"-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LARDLQDMRLRKKKRQTVRPLPGSLFLAKASGGA-RIPLRAAL----------RQLYQHGVHQPVWTVTAENAESFRLSFRRFF-RWGSSVSRGVQLADGGWLVPRDDWTLGKEEFYRALCDSPGVDVKLLSQEWAYNHYRWVVWKLASMERSFPLTMASLWLNPEQILLQLKY-RYDVEVDHSRRPALRKITERDDAAAKTLVLCVCGVVP----------GADQQPQG---SHAP---PPGVVWLTDGWYAIKAQLDAPLTAMLRRG--GAGGKLVVYGAELVGSQDGCSPLEAPEGLMLKIGANSCRRARWDAKLG--FQRDPRPFLLRLSSLFSTGGAVGCVDLLILRSYPVLWMEKKQDGVFVFRSGRAEEREARRFDDHNNKTMEALYAKIQADIQRED-------------------KGSARERNSGEELYEAFEN--DPAYLE--ACLNDQQLEVLQSYRRSVLEKRQAGLQERCRRALEQAQESQGGCPRRDVTPVWKLCVVDARAPP---GYM---LNVWRPPADLQAQLKEGARYRVYNLSVTAGKKRNPGASVQLTATSKTHFQEVQVGQDWLSDHFQARQAVHFQELQRPEVQSACGEVDLVGYVVTTADTH------------GTSPVVYLVDGDLNLVKVRCFSSLLQWGLEELVKPATLLALSNLQLSAR----RATTLPVLYASDLTAFSSNPREAHLQSSHSNADRXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------XXXXXRRR-ALDYLSRMPSPPPLGPLGSLASPACVKKTFNPPRRST-TP----AAVATTRQTPAHGPR-VGPWQ---------EEEWENDEGLAQIDTQV--L---------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"GeneScaffold_2233:16156-29802","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSGMOP00000010385"}]},"branch_length":0.374688,"id":{"source":"EnsEMBL","accession":"ENSGMOG00000009699"},"taxonomy":{"scientific_name":"Gadus morhua","id":8049}}],"taxonomy":{"scientific_name":"Holacanthopterygii","id":123370}},{"events":{"type":"speciation"},"branch_length":0.18246,"children":[{"exon_boundaries":{"boundaries":[27,112,143,195,206,246,270,297,422,705,800,1057,1427,1589,2768,2801,2825,2847,3002,3009,3067,3130,3188,3316,3370,3424,3467,3538,3594,3653,3744,3814],"number_of_exons":33},"sequence":{"mol_seq":{"seq":"----M------IEDFFHQIETE-----ELGPLSSDWFKELTAKASKDESF---PGAVEHEASSRTEDGTFRAPQETPALESQMSSTPRLFRVRGPL---SPDSVLGRSPNPAFQQQGMQTPLST-LPWTDSSPCLFGSAKESQRFEEDSEPLKKH-----------------------------------DYFGLLDTPKSSLVQ-DSSAKRISESLGAQLHPDLSWSSNFNTPGAMSPTVILTKKDAQPSPVSFLKDK-EVIIVR----KLFPSLSKGTESTSEITSTAHNNASLTEE-NAQTKGPDESFDNVEGLWRQT----------------VPDAINDSDVRDTVESVLDGAEDVLSIFFSNSSSAL--RRVKSKER-TKKRVNGVSKD---VKP-----AALATQHYTDRTGTATEAKSPPKNKD---------------------------FSQWSPLSLSQ-VSDAKAKQ-----------DCTSDLANKHL------------------------------------------------------------------------------------------------------NF------------ESVNSDSGEDALKDSITQLGQFNTCEVEKQKSSPDSYPEKSQLRS--------SLLAASPALTFSRKPRKFVYQVQSPFPPTKENDLTGKHYREPFLTA----ENKKHIKDDPQTSDTVGD----------------CLVHPKEPPVKQGNPGALNVDHGLDMTQLCNAFAEDFTQEIRSDAIKIDEVQTKAESVLHSD-----DGAEHLEFPANHKEASALAEESINLTSRSRMENT-----------------------------------------------------------------LSESLKHENGYPAV------------------FNDVSGLSSSCND--------GADKYLYSGFKTANNKLIHVPPEAVMKAKA------------------TFEDFVDLE---------------------EIRSDGLNTGSGTALNSSVVS----------------------------------------------TW-----SSERYSHALNKPEREPTGNLLHGSLDV----------ASGCTSTSYLPKTNDSGFKTASNRSITISSVNLEKAKDIFKELEVE-------------------------------------------NLYKTDICPSSNSAELEIQVMKNAKV------------------------------PKLDIKRNV--------DGNYVLTASQKADVTELCSMLEDADSQYEFTQFRQAKPCSKSMESSRSEREWDPEILSGIDFDDSFNCDTERQLPRKWPVRPDLPTQNGPVSNSMKNGKETPKAELSLNDYRLSLRSDGREMAKTPAVQTNTSEGNEP---------------VCV------------GFKTARGN-SVRISEKNLTKARSLFAD-------LEDCVGK-----IGLKSDHNSVTAQVT---------------TKQTKHNQNSHNK-----DDVCKQI-------------------------------------------------------------------CSTENPEDQDNPQGTKQNEKPDLLVDTRHCGF-STAGGKELKVSES------------------------SLLKAKKLLNKVSDQCEAVPSIKAPPNRVTTLKVANI--NLQPSVCSNSKVSENVFPHNLKMSCKSLTGNSKDQMFRNSES----------------------------------------------HHRLSEIEQQTTAKYQSTKSIQSS-----GFKMASGKGVSFSSSAIEKSRAIFR----D-LDSLIAEDGSNETKSMDENAK--------------------------------------------------------------------------LHDEAERSQCK-----------------FANGFKMASGKGVSFSEGAFLKSKAFFKDCDADYPDHSQG-----------------------------------------------------------------------------------------KGDQSSVMDNCGFKALV-----GN-TVHLPEIDSPNKEIVG---LKDEATVLNKYVEK-------------EFVPTSAPEILQFTSGC-----------GFSTASGKMVSVSAEALQKAKAVLDDSSAASPCEIKADVSEEKNKKGVPKTDTY--------------------IPGRSLGFSTASGRKVAISDRALEKAKNL----------F-ASCEVEDLANNGITL--NSAQTKPLGSEQTRCLGFSTASGKGVAVSEKTLKEAKAVFAGCEDILETADVHKPLKTGRVVEEKDKGSLNQSLTNREFQTCESANFRLSSGKCEEINNANKSNVKVEQFGFSTASGKGVSVSKSALKVAFEMFRDCD---VQPITEEQHPVAQID-------------------CPSSSDETRRHTTDTTTLSLSTQAIRDDSSLLNSHALSLN----------------------------------------------------------------GCTMTQQKYLEQE-AMACTKALLEDDFNEHS------RSEPVEETVIRKCPTL-AEQRSYEVIIGERKRTSDADLTGKALSNSSQPPLKRRLISEFDQISDGTRVC--VPVKSSPNGTLTDRRVFKGNVHLKPNITHPSSIGSVSKKSKNIMD------------QNASKALDGEKRRPSNPK---AVIFIPPFQKNIKPTRKVPTN---------YVSRDNAKVPTMFIPPVKKNPMSN-----------VLQGNSIQSCTDSDCEKLEK------EDTLEVKPNTAGNHDSEPEKKEKEV-----------EEDQYGSFEESLELARDMQDMRIRKKKRQTIRPLPGSIYLAKTSGVT-RISLREAVNNKCPLLHSQEKLYQYGVHCQVSQITAENAELFRFNFDDFFKREMFIDNTGVQLADGGWLIPDNRGTVGKEEFYKAMCDTPGVDPKLMSEAWVFNHYRWVVWKRACMERTFPEVMGGRCLTPEQVLLQLKL-RYDTEVDNSRRSALKKIMERDDTPAKTLVLAVCGFAKSSSSPVN---SEKAVGTP---DSKTSESTAAIIWLTDGWYSIKALLDPPLSSMLQKGRLSIGGKVMIHGAELIGSQDACLPLEAPDSLMLKISANSTRRARWDSKLG--FYKDPRPFSLPLSSLYSNGGVVGCVDVIVLRSYPTQWMEKRTGGVFVFRNERAEDREARRHSSAKQKTMELLFTRIQAQFEK--EEEEKKKTRRR--KRFR--RCDIHSMQDGEELYEAMEN--DPAYVE--AHLSAQQMEAVSSYRRVMADRRQVQLQERMQKSVQEAQESEGLCPNRDVTPVWKLTIADFSDLHSNCTYT---LNIWRPSLELRSLLKEGCRYKAYYLSTSETKKRSGTANVQFTATKKTQFQDIEVCPEWLMANFPARQFTIFRDLQNSAFSSPCGEVDVVGYGISILDRQ------------GASPVLYLVDDKFDFVSVRSFSSLVQLALENLVKPLTLLAISNLQLRE-----LSGPVPRLYAGEQALFSVNPKEAHLQEAMAHLKTFVQ-SYENFFSVAEEKLSNLLPSGSVKPAQSPR-------------------------TLGVSSVPKLNSRINVTPQPP-KVHSPFTP-------VSRRAPTPT--DQTTEPKDPKSLKRKR-GIDFLSRVPSPPPLNPLNILTSP-NVKKTFNPPRRSE-TNRPARR--------------DPAPSRRSASLAPSVEEQWVNDEELAMINTQTLLD---------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"KB882257.1:1212119-1232402","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSAMXP00000013440"}]},"branch_length":0.449162,"id":{"source":"EnsEMBL","accession":"ENSAMXG00000013027"},"taxonomy":{"scientific_name":"Astyanax 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---------------------------------------------GLAPLVYLSDECHNLLAIKFWIDLN----EDIIKPHMLIAASNLQWLPE----SKSGIPTLFAGDFSMFSASPKEGHFRETFHKMKNTIE-NIDIFCNDAENKLIRILNTNNPKWSTPTKDYTSAPHTAQTV-----LGTGNK--FLMSSPSSEMDYQSPLSLCKL-KGKSVSTP-------AAAQMTSKSCCKGEKETDDPKTCKKRR-ALDFLSRLPVPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPMKKKELNSPQ-MTPLKKFNDI-SLLEGDSIADEELALINTQALLSGSAGENQLKSISESTRTTPT-----------------GPKDYLRLKRPYTASVV--KEQGNSPAGTEEQKAN---MQD-------------------TSTENYIQ------------","is_aligned":1},"location":"GeneScaffold_3256:41151-92800","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSTTRP00000010004"}]},"branch_length":0.034985,"id":{"source":"EnsEMBL","accession":"ENSTTRG00000010541"},"taxonomy":{"scientific_name":"Tursiops 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taurus","id":9913}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MPIGCKERPTFFDIFKTRCNKA-DLGPISLNWFEELSSEAPPCNSE---LSEELEYKISSYETNPFKTPQRKP--YHQLASTPVIFKEQSLTL---PL--YQ-SPLKELHKFRSDSGKD--IANSKHKSCCRVKAKINQANDVISPPPNSS---LSESPVVLRCTYVTPQRE----------K-SVVCGSLFHTPK--LIK-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VQDEEASAAVFPSDT--TTILK----TYFSNHDESL-KNSKFIPSGPDSDNKNQT-EAESHGLEKILEDSFGKVSSCKDHFEK--------S-LPNVLED-EVHETVAGI-S-EEDSLPVCVSKYKTKKL-QKTKTGK--TRKNIFHETKT---DDCE-G-AKKEMTESKHSFVCETEPNDSDPLDSNVIN---QK-PAGNGTDIISREVVPSS-VSEWSQLTLSS-LNGTQVEKTSL----LHI-SCDQTNSEEDFIGTEKDC-TNFITLENSLPHISSISK-IVKILNKETVVNKTDEGRCLESHEDPTTMGQQTLT---DS-----------SPLQGIKKSTFRIRESPEKILRE-DF--------SN--NVTDTNLKEEPE-DSKSESEIQTIYSQKEDFVCSSSGDNESWPATTKHTSE--ALKSTGLISTLKKKTKKFIYVINDKTTYQELKIQKDQESELTNSSA----QFEAKPLEAPHTFTNVDS-GSLHS----S-VQKNCSQNDSEEPSLSLTSSFGTVLRKCFNNESSSSNNQKISQDLYCKETNINKEKWQSFITTETDYVSCLQDKHCEDNPKS-QGVSDIKEKVLPVVCRPELPHS-E-ECSDT----VFQ------FQESFLHDHENTT--ILTPSSK----DLLSNPVVISRGKQSY-KMSEKIKSKNCEAGFEL-TK-------YISMEKNQETCVLNENSKK----PEMLSPEKYITGASPSVKVQCYQNMNLTVIHKDQ---EETTLISKRT-VNPNSEELFPDNENNYIFQTTSERNIPILGNIK-EIHEADLSCLKEPVLKNSVIV--TSTDMDGGQAAKVSITKDSVSS-NIVHDLIEKNRNSIKQQPKMTLG-----QDSKPDVSLDT-DTRSNRNNFCGDKWA----------G---LSDLTSGHSFGNGFRTASNKEIKLSEHNIKKSKTLFKDIEEH-YPASLAWVE-------------SVK--S-------L--ENQKKEGQPHDHDSQSIDTVCGYVQNGAVVSDGENSHTTP--------------------PVLSLKQDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSHRLQSNP---FEMPE----TQMPVSNTTSEEQKDVDLHLTAS--------VPSLSHVDNSKKC-GLVG-HEQKLICLSTTKCNKSVS-GSLTDKSEE---------------EFK------------GFYSARGT-KLNFSNEALQKAMKLFSD-------IEKVSEE----T-PAEVDPGSFSSDQC--NDSDVSMFKVE---NY-SNDKNLSEE-----NNKCQLILQS--NFE-MTTSIFVKENTEDFKRNTEN-K-DNK--------------------------CTDFV--C--NLGESDGCASSKN-DTVYVHKDESGLPY-TDQYNIHLKLSHHFMKEENIP----IKEGLSDLTCL-EVMKAEETF--NKSDKK-EPIANKMRQNIKDFGVFDL--SFWTASRKNIRVSKESLNKVVNFFDEKCTEKEFNHFSDSSNS--------ELLSGIHINKKDISSHEETSMF--KNKMLKESSPAGI-ENQILTLQQREKCELKKIREPTML-----GFHTASGKKVKIAKESLDKVKNLFD-ETKQD-NSEVTGFIHQEAKMLKNKEV--CKEGLDLACEIVKV-TAPQHEEMQNSLEEK----KLVSEET-AMPPRFLSDHLHRQTENLHTSHSISLK-VKVHENMEEETAKSPLSCYTNHSTFSAIDNSALAFYTGHGRKISVSQASLLEAQKWLRE--GELNDQPEKTNSSEIICL---KEYTGDYVQNPSCGNSSN-----------SIITENDKS--LSQKQDSTSLNN-NMPNSYSY--HSDFCHSSEGFNKSEYLSKNKIDNSGIEPVVKNVKDRK-NTSFSEVIPTIRETNINPQALDKDSCVLKLMTKFSPCKNKK-----TAVEVALSNSNNFETEP----------PAYSTASDQIAFVSGET--TVRERFTD--NCRNIYIKQNTETKSGTDQTKTVTESH-KALGDSEDVI-F-PNS--PDNEEHNMHSQDVSHDIQGEPILQHDQST---SGLEKVSEIPLRHVDLKTSDRCKF--NMGNHPRSVSSMNACGIFNTASGKSVQVSDSALRKARQVFSKS-------E-DSAKQLFSTVSFESN-EHSDIFRRKDNIMAHNPPNLL------------SSAF----SGFSTASGKHVPVSESALRKVKGMFEEFNL-IETEYSLQHSPTSTQD----ISKILPVSCTDK--RTPEHSLSSKMEKAYNKEFKLSNNYNTESGSSENNHSIKVSSYLSEFKQDQQ-QSVLGTRVSHID-NIHLTGKKQTLPKNIKKEIGKTETFPDL-VKTNTEICS-TDSKDPENYFETE-AVEIAKAFMEDGELTDS------EFPSHAKHSPLTCHKN-EETVLSNSRIEKRK--------GDALITVGEPPIKRNLLNEFDRIIENQGKS-LKASKSTPDGTMKDRRLFMHHFSLEPVTCGPS--CVTTERQEIQNPNFTAPGQEF---LSKSQFYEYLTLGKSSSNL---SISGQPLCKV--PDPRNEKR---------RHSITVGKPMKVFVPPFKTKSHIH-------RDEQFVGKNTNLENK-QKQKNVDE------HGSGDSENNVNNCETHQ---------TTTIHFTKGEEEP-L-GSITNLQNARDIQDMRIRKKQRQRIFPQPGSLYLAKTSTMP-RISLREAVEGRIPSVCSHKRLYMYGVSKHCVKINSKNAEAFQFHTQDYFGKEGLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPRLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKY-RYDVEIDRSKRSAIKKIMERDDTAAKTLVLCVSEIISLSTDI-----SEPSSNKT---SSVDAT-KVAIIQLTDGWYAIKAQVDPPLSALLKNGRLTVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAK--LGFSPDPRPLPLPLSSLFSDGGNVGCVDIIIQRAYPIQWMEKTSTGLYIFRNEREEEKEATKYAEVQQKKLEALFTKIQAEFEDH-EENVTEQCIPS--RALT--RQQVRALQDGAELYEAVKNAPDPSYFE--GYFSEEQLRALNNHRQMLNDKKQAQIQVELRKAMESAEQGEQILPR-DVTPVWKLRIMSYKRKEKD-SVI---LNIWRPSSELYSLLTEGKRYRIYHLTASKSKSKYERANIQLTATKKTQYQQLPASDEILLQIYQPREPLHFSKLLDSDFQPPCSEVDLIGFVVSVVKKI------------GIAPLVYLSDECHNLLAIKFWIDLN----EDIIKPHILIAASNLQWRPE----CKLGIPTLFAGDFSMFSASPKEGHFQEAFHKMKNTVE-NIDMFCEDAKNKLIRLLNASNPKWSTPTKDCTSAPPTAQTV-----LGSGNK--FPLSSPSSEMNYQSPLSLCKL-KEKSVCTP-------VSAQVTSKSCCKGEKETDDRKSCKKRR-ALDFLSRLPVPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPMKKKELTYPQ-MTPLENLNNI-SLLESDSIADEELALINTQALLSGSAGGNQLTSTSKSNRTVPT-----------------SPKDYVGLKRPYTTSVI--KERENSPARTEEQETN---MQD-------------------TSAIKNISKRLQRRLKP--K","is_aligned":1},"location":"10:28872321-28924433","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSOARP00000011988"}]},"branch_length":0.017323,"id":{"source":"EnsEMBL","accession":"ENSOARG00000011179"},"taxonomy":{"scientific_name":"Ovis aries","id":9940}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Bovidae","id":9895}},{"exon_boundaries":{"boundaries":[3060,3123,3181,3332,3357,3380,3395,3460,3532,3587,3646,3737,3793],"number_of_exons":14},"sequence":{"mol_seq":{"seq":"--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------I-DLITNLQIARDIQDMRIKKKKRQRIFPQPGSLYXAKTSTLP-RISLKEAVEGRVPSACSHKQLYMYGVSKHCIKINSKNAESFEFHTQDYFGTEGLCAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKY-RYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSE-IALGTNI-----TETRSNKT---NSVDTT-KVAMVELTDGWYAIKAQLDPPLSALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKVNSITAH-SCFKKKKTKKTVTDSKNY-IFLCVLFGGGGK---SEIIIERYYILK--VTIIQFLYLFPNLPTREHSSFRFSWSMFSSVLKFIVQLLSHAFFP-LENAAERCLPS--RALT--RQQVRALQDGAELYEAVKNAPDPSYLE--GYFSEEQLRALNNHRQLLNDKKQAQIQLEFRKAMQSAEQGEQILPR-DVTPVWKLRIISYNKKEKD-SVI---LSIWRPSSDLCSLLTEGKRYRIYHLTAAKSKSKSERANIQLTATKSTQYQQLPASDEILFQLYRPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKT------------GLAPLVYLSDECHNLLAIKFWIDLN----EDIIKPHMLVAASNLQWRPE----SKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIE-NIDIFCNEAENKRIHILNAYNAKWFTPTKDCTLEPQTPQTV-----LGTGNK--FLMSSPSTEMNYQSPLSLYKP-KGKSVSTP-------VSAQMTSKSCCKGEKEIEDPKNCKKRR-ALDFLSRLPVPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----H-EIPIKKKQLNSPQ-MTPLKKFNDI-SLLEGDSIADEELALINTQALLSGSAEENQLTSISESTRTVST-----------------SPKDYPRLKRHHTTS-----------------------------------------------------------------","is_aligned":1},"location":"GL894428.1:2554-22348","id":[{"source":"EnsEMBL","accession":"ENSSSCP00000022872"}]},"branch_length":0.12221,"id":{"source":"EnsEMBL","accession":"ENSSSCG00000020961"},"taxonomy":{"scientific_name":"Sus scrofa","id":9823}}],"confidence":{"value":16,"type":"boostrap"},"taxonomy":{"scientific_name":"Cetartiodactyla","id":91561}}],"taxonomy":{"scientific_name":"Cetartiodactyla","id":91561}},{"exon_boundaries":{"boundaries":[28,121,164,191,195,207,247,270,309,625,633,748,791,816,827,831,861,884,886,910,2103,2769,2802,2828,2957,3007,3070,3132,3190,3318,3372,3424,3469,3541,3596,3655,3746,3803,3400],"number_of_exons":40},"sequence":{"mol_seq":{"seq":"----MPIGCKERPTFFEIFRTRCNKA-DLGPISLNWFEELSSEAPPYNSE---PSEESEYKISSYEPNLFKTPQRKP--YHHLASTPIIFKEQGPTL---PL--YQ-SPLKEQGKFRLDLGKD--VTNSKHKSFCTMKAKVDQANDVTSPPPNSC---LSESP-VLQYTHETPQRE----------K-SVIC-TLFHTPXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XRDEEASAATFPSDT--TAILK----GCFSNHDQSLKKNDRFIPSGPDNEN--QR-KAKSHELEKILEESFGNGNSCKDHFEK--------S-MPNVLED-EVHETAADI--SEEDSFPVCVSKYKRRNI-RKVKTGK--TRKNIFNKTKT---NEYE-E-AEKQMTENKHSFVSEMGPNDSDPLDSNVTNQ---K-LFGNGADKISQEVIPSS-ASEWSQLTLSG-LNGTQMEKTSL----LHISSCDQNNSEEDCIGTEKEF-INFITSENYLPHISSLSK-TVKILNEXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXX-------XXXXXXXXXXXXXXXXXXXXXXXX-XX--------XX--XXXXXNFKEE--EASKSGLEIQTICSHKEDSLCTSSVDNGSWPATTKNTSV--ALKNAGLISTLKKKTKRFIYAINDKTSYQGLKMQRDQESELTHSSA----QLEADHFETPLTFTNIDS-GLLHS----S-IQKHCLQNDSEDPPLSLTSSFGTILRKC--------NNKIVSQDLDYKEAKFSKEKLESF-PTETDYMSC--QGEXXXXXXX-XXXXXXXXXXXXXXXXXXXXHS-E-DCSDT----HFQ------SQE-LLHDNDNTT--VLTTVFN-----DLSNPVVISRGKESY-KMSEKIKPKNSEAGSEL-TK-------NISLENSQEACILKEDSRK----PELFSPEQYVTAASPLTKIQFNENTNLTVFQKKQ----ETTLISKIT-VNSNSEELFPDNENNFVFQITSEKSIPILENTK-ELHEADIICLREPVLKNSATA--ARTDLGDKQAAKVSITNNFVSS-NTVHDLTEKSRNSVKQQPKMTLS-----QDSKSDVSLDI-NMKSNRNNDCMDKWA----------R---LSDSISSHSFGNGFRTASNKEIKLSEHNIKKSKMFFKDIEEH-FPTSLACIE-------------TVNTLS-------L--KSQKKPSRPHAVDSQSMNTISGCVQNSAFICDSENSHTAP---------------------ILSLKEDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSDIIQNNP---FEMPE----NQMSVLKTTSEEWKDVDLPLTVN--------VPSSSQVDSSKEFEDRVG-DKQKFACLSTTNCNKSTS-GNSTDKNEV---------------EFR------------GFYSARGT-KLSISSEALQKAMKLFSD-------IENVGG-----T-PAEVDPRIFSLSKC--NNSDVSEFKEE---DY-SNDKNLSEK-----NNKCQLVVQN--NIE-MTAGIFVEENTEDYKRNTEN-E-DNEC--------------------------IGFV-CNLR---ESDGGSSSKN-DTVSIHKDEDVLPC-TDQHNMYLKSSRQYMMEGNSQ----NKEDLSDLTCL-EVVKAEETFHVNMSNKS-QSTANKMRQNIKNFDTFGL--SFQTASGKNISISKESLNKVVNFFDEKCTEEEMNNFSDSSNS--------ELLSGINTNKIDISSHEELDKV--KDKILKESDSIGI-ENQLLTLQQGQEYEIKKIKEPTML-----GFHTASGKKVKIVKESLDKVKNLFD-EKKQD-NSEVTNFSHQGAKTLMDREV--CKEGFELACETVDV-TAQKHEEMQNSLE-E---KKLVSEES-AVPPWLLSDHLYRQTENLSITNSISLK-VKVHENIE-ETAKSPMTCYTNQPTCSAIENSALAFYTGHGRKISVSQASLFEAKKWLRE--GELDDQTEKKNSA-------------DYVGNLSCGNHSN-----------RITTENDKN--FSEEQDPTYLSN-SMSNSYSC--HSDFCHSSEVFNKSEYLSKNKMGNSGIEPVVQNVKDRK-NISFSEVMSTVREANTYPQAVDESTCVQKLVTNSSPCRNKN-----TATEMVISDSNNFEIEP----------PAFGTASDKT---------KVRERLTD--NGGKV-IKQNTESKSDTCQTKIVTGSH-KALEDSEDIT-F-PDS--PESEEHRMRSHDVSPDIQSEPILCHDPGM---SGLEKVSEIPPFHINLKTSDICKL--NVEKHPRSVSSMNACGVFSTASGKSVHISDAAFQKAKQVFSKI-------E-DDAKQLLSKVSFKSNEEQSDKFS-GENTKIHTPQNLL------------SSAFS----GFSTASGKQVPVSESSLCKVKGMFEEFDL-IRTERSLQHSPTSRQN----ESKILPLSCIDK--RTPEHSVSSKAEKDYSKEFKLSNNRNVESDSSENNHSIKVFPSLIQCKQDKQ-QLVLGTKVLLVE-NFDLLGKEQILPKNIKMEIGKAETFPNLPVKTNTEICS-TNSKDLENYFETE-AVDIARAFMEDGELTDS------ELLSHAKHSLFTCQKN-EEAVLLNSGIGKRR--------GGALATVGEPPTKRNLLNEFDRIIENQEKS-LKPSKSTPDGTVKDRRLFMHHTSLEPVTCGPF--XXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXX---XXXXXXXXXX--XXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXX---XKQKNIDE------RSSGDSEN--NGSEIHQLNKSNSNQT-AAVMFTKGDKEP-L-DLITNLQNARDIQDKQIKKKQKQRIFPQPGSLYLAKTSTMP-RISLKVAVEGRVPSACSHKQ-YMYGVSKHCVKINSKSAESFQFHTQDYFGKEGLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPQLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLFQLKY-RYDVEIDRSRRSAIKKIMEKDDTAAKTLVLCVSEIASLSTDT-----SETPSSKT---SGVDTT-KAAVVELTDGWYAIKAQTDPPLSALIKNGRLTVGQKVIIHGAELVGSPDACTPLEAPESLMLKISTNSTRPARWYAKLG--FSPDPRPFPLPLSSLFSDGGNVGCVDIIVQRAYPIQWMEKTPSGLYIFRNEREEEKEATKHAEAQQKKLEALFTKLQAEFEEH-EDNVTERYIPP--RALT--RQQVRALQDGAELYEAVKNAADPGYLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQGEQILPR-DVTTVWKLRIISYKKKEKD-SVI---LSIWRPSSDLYSLLTEGKRYRIYHLAASKSKSKSERANIQLTATKKTQYQQLPASDEILFQVYQPREPLHFNKLLDPDFQPPCSEVDLIGFVVSVVKKI------------GLAPLVYLSDECHNLLAIKFWIDLN----EDIIKPHMLIAASNLQWRPE----YKSGIPTLFAGDFSMFSASPKEGHFQETFHKMKNTIE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXX--XXMSSPS-EMKYQSPLSLSKP-KGKSISTP-------VSAQMTSKSCCKGEKEIDDPKSCKKRR-ALDFLSRLPVPPPVSPICTFVSP-AAQKAFQPPRSCG-TR----Y-ETPIKKKELNSPQ-MTLLKKFNDI-SLLEDDSIADEELALINTQALLSGSSGEDQRMSINESTRTAPT-----------------SAEDHLTLKRHYTTRGI--KERENSQARTEEHETN---MQD-------------------TSTKKYLQ------------","is_aligned":1},"location":"GeneScaffold_1422:28074-80684","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSVPAP00000000821"}]},"branch_length":0.053111,"id":{"source":"EnsEMBL","accession":"ENSVPAG00000000886"},"taxonomy":{"scientific_name":"Vicugna pacos","id":30538}}],"confidence":{"value":14,"type":"boostrap"},"taxonomy":{"scientific_name":"Cetartiodactyla","id":91561}},{"exon_boundaries":{"boundaries":[28,125,129,163,191,208,247,270,309,743,1266,2098,2767,2800,2826,3004,3066,3129,3185,3187,3315,3369,3419,3466,3538,3593,3652,3743,3799],"number_of_exons":30},"sequence":{"mol_seq":{"seq":"----MPIGCKERPSFFDIFKTRCNKA-DLGPISLNWFEELSSEAPPYNSE---PAEESEYKINSYEPNLFKTPQRKP--YHHLASTPIIFKEQSLTL---PL--YQ-SPLKESDKYRLDLGKN--IVFSKSKSCCTMKAKMDQANDVTSPPLNSC---LSESPVVLRCTHVTPQRE----------K-LVVCGSLFHTPK--LMK-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLI-ARDEEASATVFPNDT--TSILK----SYFSNHDGSLNKNDRVNPSGPDKENKNQR-EAKSHELREMLRNSFGKVNSCKDHFGE--------S-TPNVLQD-KVHETVADI-S-EEDSFSLCVSKYKTRNL-QKRKIGK--SRKNIFNETET---DEFE-E-VEKQMKENKHSFVFEMEPNDSDPLDASVTN---QK-PFGNVSHKISKEVVPSS-ASGWSQLTLSG-LNGTQMEKIPL----LHISSCDQNNSEKDIIGTEKEC-TNLITLENSVPRISCVPK-TEKKLNEETVINKRDEGQCLESHEDSILVVKQAIS---ETSLI-------ASSLQDIKKSIFRVREIPEETFSA-VF--------SN--NMTDPNFKEKPE-ASESGLEINTLYSQKEDSLCTSSVDHGSWPATIKHTSI--ALKNAGLISTLKKKPKKFIYAISDEISYQGLKIQKDQESGPTNCST----QLEANTFETPVTFINSDS-GLLHS----S-VKKNCLQNDSEEPTLSLTSFSGTVLRRCSNNESSSSNNKIISQDLDCKEAKINKEKLQSFITTETDCLSCLQEKHCEDDSKG-QRVSDTKEKVLPAVCHPGMPHS-EVECSDT----CFQ------FQESFLYDHDNTS--ILTPSSK----DPPSNLVVISGIKESY-KMSEKLKFKNCETDFEF-TK-------SIPMEKNQEIGVLNENSEK----AELLSPEKYITVASSSMKAQVSQNTNLTIIKKKQ---EETTLISKIT-VNPNSEELFPDNENNFVFQIANERNIPALENTK-ELHEADLSCVEEPIIKNSTMV--VCTNIDDKQAAEVSITKDLDSL-DTVRDLTETNRNSVKQQLEMTVG-----QDSKSDISLDI-DMKSNRNDDCMDKWT----------G---LSDPISNHSFGHGFRTASNKEIKLSEHNIKKSKMLFKDIEEH-YPTSLACVE-------------IVNTLS-------L--ENQEKLSKP-----HSINIVPRYKHSSAFVSDSENSHTTP--------------------PILSLKQDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PRHIIQNNP---FEMPE----NQVTVLNTTSEEWKDVD-HPTVN--------TPSVSQVDSSKKYESIVR-GKQKFACLLKTNCNKNAS-GYLADKNDL---------------EFR------------GFYSARGT-KLNVSSGALQKAMKLFSD-------VETISEE----P-SAEVDPRSISLSKC--NDSVVSMFKIE---NY--NDKDLNEK-----NNKCQPILKN--SIE-VTTGIFV-ENTEDYKRNAEN-E-DNK--------------------------CTETS-RNICNLGEFDGDESSKN-DTVYIHEDESGLPC-IDQHNIYLKLPGQFMKEERTQ----IKEGLSDLTCL-EVVKAEETFHVNTSNKE-QLTANKMGQNIKDFDIFDL--SFQTASGKNIRVSKESLNKVVNFFDQKYTEKELYNFSDSLNS--------ELLSGININKIDVSSCEETDMV--KDKILKERNPVDT-ENQLLTLQQGSECEIEKIKELAML-----GFHTASGKKVKIAKESLDKVRNLFD-EQNQNSNSEITNFSHRGAKPLKDREE--CKG-LELGCETVEI-TAPKYEEMQNSL-EE--E-KLVSSEI-ALSPRLLSDDLYKQTENLKTSNNISLK-VKVHENLGKETAKSPTTCYTNQSTCLDVENSALTFYTGCGRKISVSQTSLFEAKKWLRE--GELDDESEKIRYLQ------------DYVGNPSCRNHSN-----------GIITGNYKN-HLSEKEDSTYLSNSSMSNSCLY--HSDFCHSNEVYNKSESLSKSKTDNSGIEPVVKNVKDRK-NTSFSEVISTIREANSYPQTVNEDICVQKLVPNSSPCKNKN-----TAIKVTTSDSNNFETGV----------PAFSTASGKIVFASHET--KVRGRFTD--NGSKI-IKQNTESKSGTCQTKIVASSH-KALDDSEVVI-F-SNS--PDTEEHSMCSNKVFAEIQSEQILQHNQNI---SGLEKVSEISPCQINLKTSNICKF--DMGKLPKSIASVNACGIFSTASGKSVQVSDAALQKARQVFSKI-------E-DGDNQLFSKVSLKNNKEHSDKFTREENTMIHSPQNLL------------SSAF----SGFSTASGKQVPVSESALCKVKGMLEEFDI-IRTECSHQHSPTCEQD----KLKILPLSCIDK--RTPEHSVNSKTEKAYSKEFKLSSKYIIESGSSENSCSVKVSPYLPQFKQDKQ-QLGLGAKVSLVE-NIHLLGKEQALPKNVKMEIGET----NLPVKTNTEVCS-TYSKDPENCFETE-AVEIAKAFMEDGELTDS------ELLSNTKHSLFTCQNN-EEMISLNSRTGKRR--------GDALVSVGEPPIKRDLLNEFDRIMENQEKS-LTASKSTPDGTIKDRRLFMHHISLEPVTCGPF--CTTKERQEIQKPNFTAPGQEF---LYNSHFYEHLTLEKSSSNL---SVSGQPFYKA--PATRNEKR---------RHSLTTGKPRKIFVPPFKTKSHFH-------RDECCVSRNTQLEENKLNQKNIDE------HGSGDRENNINDGETCQLNKSSSNQ-AATMIFTKWEEEP-L-DLITNLQNARDTQDMRIKKKQKQHIFPQPGSLYLAKTSSVP-RISLKAAVGGHVPSAYSHKQLYMFGVSKHCVKINSKNAGSFQFLTQDYFGKEALLAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIVWKLAAMEFAFPKEFANRCLTPERVLLQLNQ-LYDIEIDRSRRSAIKKIMERDDTAAKRLVLCVSEIISSSTDI-----SETSSSKT---RSVDTK-KADIIELTDGWYAIKAHLDPPLLALLKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYAK--LGFFPDPRPFPLPLSSLFSDGGSVGCVDVIIQRAYPIQWVEKTSAGSYIFRNEREEEKEAIKYAEAQQKKLEALFTKIQVEFEEH-EESIAKQCTPS--RALT--RQQVRALQDGAELYEAVKSAPDPSYLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAVESSGQGEQILSR-DVTTVWKLRIISYEKKQKD-SVL---LSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSRSERANIHLTATKKTRYQQLPASDEILFQVYQPREPLHFNKLLNPDFQPPCSEVDVIGFVVSVVKKI------------GLSPLVYLSDECHNFLAIKFWIDLN----EDFIKPHMLIVASNLQWRPE----SNSGIPTLFAGDFSTFSASPKEGHFQETFHKMKNTME-NIDIFCNDAENKLMHVLNANDAKWSTPTKDYTSEPHTAQTV-----LGMGNK--FLMSSPNSEMNYQSPLSLCKP-KGKSVSTP-------LSAPMTLKS-CKEEMEIDDPKNCKRRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPIKKKGLNSPE-MTPLKKVNDI-SLLEGDSIADEELALINTQALLSGSAGENQLMSISESTRTTPT-----------------CSQDCLGLKRHCSTSVV--KEQEKSQVSTKERETN---TQD-------------------TRTVK---------------","is_aligned":1},"location":"17:11512132-11574407","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSECAP00000013146"}]},"branch_length":0.048699,"id":{"source":"EnsEMBL","accession":"ENSECAG00000014890"},"taxonomy":{"scientific_name":"Equus caballus","id":9796}}],"confidence":{"value":5,"type":"boostrap"},"taxonomy":{"scientific_name":"Laurasiatheria","id":314145}},{"events":{"type":"speciation"},"branch_length":0.028433,"children":[{"events":{"type":"speciation"},"branch_length":0.010438,"children":[{"events":{"type":"speciation"},"branch_length":0.008444,"children":[{"exon_boundaries":{"boundaries":[28,125,164,191,208,246,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MPIGCKERPTFFEIFKTRCNEA-DLGPISLNWFEELSLEAPPSNSE---PTEESGYKIN-YEPNLFKTPQRKP--YHQLASTPIIFRDQGLIV---PT--YQQSPLKELDKYRLDSGKD--ITNSKHKSCCTMKSKMDQTNDVTSPPLNSC---LSESP-VLRCAHITPQRE----------K-SVVCGSLFHTPK--LMK-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIVVRDEEASAAVFPNDT--TAIFK----SCFSNHDESRKKNDRFIPSGPDKENKNQR-EAKSQGLGKMLGNAFGKVNSCRDHFGK--------S-TPSVLED-EVHETVADV-S-EEDSFSLCVPKYKT-NL-PKIKTSK--TRKNIFNETKT---SEYG-E-AKKQMKENKHSFLSEMEPNDSDPLDWNVTN---QK-PFGNGSNKISKKVVPSS-ASEWSHLTLSG-LSGTQMEKTPL----LHISSCDQNNSEKDFTITEKES-TNFITLENSLPQISSVPEYSEMTLNEERVVNKIDEEQCLGTHEDSILSLKQAVT---ETTLI-------ASPLQGIRKSIFRIRESLEETSSA-VF--------SN--NMTDPNSKEELE-VPESGLEKHNICSQKEDSL--GSVDNGSWSATIKHTSV--ALKNSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQESGLTNHSA----QFEANAFEGQLTFTNADP-GLLHS----SPVKKNCLQNDSEEPTVSLTSSFGTVLRKVSNNGTSSPNGKTVPQDVDYKEAKTNNEKLQSFIITETDCLSSLQEKHCEDDAKS-QRVSNIKQKVLPAVSHPPVPHS-EVEGSGI----HFH------SPESSSSDHDNTS--LLTPSSR----EPPSNPVVISRVKESH-KMSEKLKCKNCEAGFEL-TK-------SIPMEKNQEIHVLNANSKN----AKLLSSEEYVTVASPSMKVQFNQNANLTTIQKDQ---KETTLISKIA-VNPNSEELFPDDENNFILEVTNESNIPVLGNIK-ELHDADLCCVREPVLKNSTMM--MYTDMEDKQTAKVSIMKDFDSS-N-IDDLTEENRNGIKQQLKMTLD-----QDSKSDITLDI-VRKSNGNNGYMNNWA----------R---LSDPISNHSFRNGFRTASNKEIKLSEHNIKKSKMLFKDIEEH-YPTNLACIE-------------IIDTSS-------L--ESQKKLSKPLALDPQSINSVPGFVKSSTYVSDSKSGHAAP--------------------PTLSLKRDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFKK----PSHIIQKNP---FEMPE----SQLTILNSTSEERRDTDLHLTIN--------APSITQVDSSKKFEGILG-GKQKFACLSRTNCNRSAS-GYLADKNEV---------------QFR------------GFYSARGI-KLNVGSEALQKAKKLFSD-------LENISEE----T-SVEVDTRIFYPSKC--NDSAVSMIQIE---DC-NNDKNLNEK-----NNKSQLILQN--NIE-MTAGIFVEETTESYKRKTEN-E-DNQ--------------------------CTDAS-RNTHNL-ESVGSDSSKN-DTVYIHEEENSFPC-IDQRSIDLKLSSQFMKEGNTQ----IKEGLSDLTCL-EVAKAEETFHVNTSNKQ-QFTANTMGQSIKDLDIFDV--SFHTASGKNIRVSKESLNKVINLLDQKWTEEELNNFSDSLNS--------ELLSGTDINKTDISSHEKTENTERKDKIMKESDLTCT-KNKLPTLQQRPESEIKKITAPTML-----GFHTASGKKIEIAKESLDKVKNLFD-EKEQD-YSGITNFSHQEAKMSKDREE--CKDGLELACETIELTTAPKYEEMQNSLE-E--K-KLVCNEI-AVGPMLLSDNLYKQTENLK-TDCSSLK-VKVHEDTEKKTGRKP-TIYTNQSTYSAIENSPLAFYTGHGRKISVSEASLFEAKKWLRE--GEVDDQPEKINAAKVICL---KEYVDDYVENPSCGNSSS-----------STITENDKN-HLSEKQGSTYLSNSTVSNRYSC--HSDFSYSSEVYNKSEYLLKNKVDTPGFEPVMNNVRERE-NTSFSEIMSTVREVDTDPQSVNEDICVQRLVTSSS-CKNEN-----TAIKVAISDSNNFNSIPKLNLDSNNAVPAYGTASSKRIFVAHQT--KVTERFTD--NCSMV-IKQKTKSKSDTYHVKIVAGYP-NALGDSEDIV-F-PNS--LDNAEHSLSSHKAFADIQSEQTLQLNQSI---SGLEKVSEIPSCQNNSKIPNICKF--STGNLPKSVPCTNACGIFSTASGKSVQVSDTALQKARQVFSKI-------E-DSAIQLFPKVSFKNN-EQSDKFTNEENTMLHTSQNLL------------SSAF----SGFSTASGKQVPVSESALCKVKGMLEEFDL-IRTDCGLQHSSTSRQD----VSKIPPPSCIDK--RALEHCGNSKLEKAYNKEFKLSSNCNTESASSENHFSIKLSPCPSPLKQDNQ-QLLLGSRVSLIE-NIDLLGKEQALAKNIKTEIGKTETFPNLPVKTNTEICS-TYSKDPENYLETE-TVEIAKAFMEDGELTDS------ELLSHAKHSLFTRQNT-KETALFSSRIGKRR--------GDALVSLGEPPIKRNLLNEFDRIIKSQEKS-LKASKSTPDGTLKDRSLFMHHISLEPITCGPF--RTTKERQEMQNPNFTAPGQEF---LSQSHFCEHGALEKSSSNL---SVSGQPFCTV--PATRNEKR---------RHLNTPGKPVKVFVPPFKTKSHFH-------RGEQCISKNTNLEENKQNLKNIDE------HGPGDSETNINDSGIHQLKKNNSNQAAATIIFTKGEKEP-L-DLITNLQNARDTQDMRIKKKQRQHIFPEPGSLYLAKTSTVP-RISLRGAVEGQVPSACSHKKLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEGLWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-RYDVEIDRSRRSAIRKIMERDDTAAKTLVLCVSEIISSSTDI-----SETSSSKT---SSVGAK-KGGVVELTDGWYAVKSQLDPPLSALVKNGRLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYAK--LGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKH-DENTTKRYVPS--CALT--RQQVCALQDGAELYEAVTNAPDPNYLE--DYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSR-NVTTVWKLRIISYGKKEKD-SVS---LSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKANIQLTATKKTQYQQLPASDEILFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKI------------GLAPLVYLSDESHNLLAIKFWTDLN----EDIIKPYTLIAASNLQWRPE----AKSGIPTLFAGDSSRFSASPKEGHFQERFLKMKNTIE-NIGMFCNEAENKLMHILNANDPKLSTPTKDYASELHAAQTV-----LGMGNK--FLMSSPSSEMNHQSPLSFCKL-EETSVPTP-------GSAQMTSKSYCKGEKEMDDPKNCKKRK-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRTCG-TK----H-ETPIKKKELNSPQ-MTPHK-FNDL-SLLESDSIADEELALINTQALLSGLAGENQLMSLSDSARTAPE-----------------SSKDYVRPKRHCTASGL--SGCRSPQARTEERETD---GQD-------------------ASTAKRASMRLQRRQKQ--K","is_aligned":1},"location":"GL192584.1:1852747-1917315","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSAMEP00000009909"}]},"branch_length":0.027922,"id":{"source":"EnsEMBL","accession":"ENSAMEG00000009390"},"taxonomy":{"scientific_name":"Ailuropoda melanoleuca","id":9646}},{"exon_boundaries":{"boundaries":[28,121,164,191,208,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3639,3651,3742,3798],"number_of_exons":27},"sequence":{"mol_seq":{"seq":"----MPIGCKERPTFFEIFKTRCNEA-DLGPISLNWFEELSLEAPSYNSE---PTEESGYKIS-YEPNLFKTPQRKP--YHQLASTPIIFQEQGLIV---PM--YQQSPLKELGRNRLDSGKD--ITNSKHKSFCTMKSKMDQTNDVTSPPLNSC---LSESP-FLRCTHVTPQRE----------K-SVVCGSLFHTPK--LMK-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRDEEASAAVFPNDT--TAICK----SCSPKHDDSLKKNDRCIPSGPDKENKNQR-EAKSQGLGKMLGNSFGKVNSCKDHFGK--------S-TPNVLED-EVCETVADV-S-EEDSFSLCVPKYKTRNL-PKIKTSK--TRKNIFNETKT---NECE-E-TKKQMKENKHSFLSEMEPNDSDPLDWCVTK---PK-PFGNGNEKISKEFIPSS-ASEWSHLTLSG-LSGTQMEKTPL----LHSSSCDQSNSEKDFTITEKES-TNFITLGNSSPQISSVPKYSEITLNKETVVNKIDEEQCLGSHEDSVLSGKRTIS---ETTII-------HSPLHGIRKSIFRIRESPEEMSSA-MF--------SN--HMTDLNSKGEID-TPESTLEKYTICSQKEDSL--GSIDNGSWPATIRRTSG--ALKTSGLISTLKKKTKKFIYVINDETSYQGLKTQKDQELGLTNHSD----QSEANAFEAPLTFTNADS-GLLHS----SSVKKNCSQNDSEEPALSLISSFGTILRKVSNNGTSSVNNKTVPQDLDYKETKINKEKLQSFITTETDCLSSLQEKHCEDDAKS-QRVSDTKEKVLTAVSYPPVPHS-EVEGCGI----HFQ------SPESFSSEHDNTS---LTPSSR----DPPSNPVMTCRGKESY-KISEKLKCKNHEGGFEL-IK-------NIPMEKNQEMHVLNANSKN----TEVLSTEKYVIVASPSMKVQFNQNTNLATIQKDQ---KETTLISKIA-VNPNSEELFPNDENNFVLEITNESHIPVLGNIK-ELHDADLCCVREPVLKNSTMM--VYTDMDDKQAAKLSIMKDFDSS-N-IDDLTEKNGNSIKQQLKMTLD-----QDSKSDITLDV-VRKSNGNNDYMNNWA----------R---LSDPVSNHSFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEEH-YPTNLACIE-------------IVNTSS-------L--ESQKKLSKPLTLDPQSINSVSVFVQSSAYVSDSESGHIAP--------------------PTSSLKQDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSYIIEKNP---FEMPE----NQLTILNRTSEECRNTDLHLTIN--------APSIIQVDSSKKFEGILG-GNQRSACLSRTNCNRSAC-GSLADKNEV---------------KFR------------GFYSARGT-KLNVGSEALQKAKQLFRD-------LENIIEE----P-SVEVDTRSFSSGKC--NDSAVSMIQIE---DC-NNDKNFNEK-----NNKNQLILQN--NIE-MTAGIFVEENTEGYKGNTEN-E-DNQ--------------------------RTDAS-GNTHNL-ESVSSDSNKN-DIVYIH-EENSLPC-IDQHNIDQKLSSQLMKEGNTQ----IKECLSDLTCL-EVAKAEETFHVNTSNKQ-QFTANTMGQNIKDFDIFDL--SFQTASGKNIRVSKESLNKVINLFDQKWTEEELNNFSDSLNS--------ELLSGVDINKIDISSYEKTENSERKNKIMKESDLIGT-ENKLLTLQQRPESEIKKIKEPTML-----GFHTASGKKIEIAKESLDKVKNLFD-EKEQG-DSGVTNFSHQGAKMSKDREK--CEDGLELACETIEL-TAPKYEEMQNSIK-E--K-KLVSSEI-VVAPRLLSGNLYKQTENLKISDQDSLK-VKVHENTEKETAKNH-MIYTNQFTYSAIENSPLAFYTGHGRKISVSETSLFEAKKRLRE--GELDDKPEKINTATVICL---KEYPDDCVENPSCGNSSS-----------STISENDKN-PPSEKQGLTYLSNSTVSNRYSY--HLDFCHSSEVYKKSEYLSKNKGDNSVIEPVVKNV--RE-NTIFSEITSTVREADTDPQIINEDICAQKLVTNSL-CKNEN-----TAIKVAICDSNNFNSIQKLNSDSNNAIPAYSTASSKRVFVAHQT--KATEGFTN--NCSMI-IKQNPKSKSDTCHMRIVAGYP-NTLDDSEDII-F-PDS--LDDAEHQSSSQKVLADIQSEHTLQLNQSI---SGLEKVSEIPTCQNNSKTSDTCKL--NTGKLPKSVSCTNACGIFSTASGKSVQVSDAALQKARQVFSKI-------E-DSAKELFPKV-FKNS-EHSDKFTNEENAMLQTSQNLL------------SSTF----SGFSTASGKQVPVSESALCKVKGMLEEFDL-IRTECGLQHSSTSRQD----VSKIPPPSCIDK--RTPEQCGNSKLEKAYNKEFKLSSHCNIERESSENHHSIKVSPCQSQLKQDKQ-QLLLGSKVSLVE-NIHLLGKEQDLPKNIKTEIGKTETFPNLPVKRNIEICS-TYSRDPENYLETE-TVEIAKAFMEDGELTDS------ELLSHAKHSLFTCQST-EEMVLLNSRIGKRR--------GDALVSVGEPPIKRNLLNEFDRIIKNQEKS-LKASKSTPDGILKDRSLFMHHISLEPITSGPL--RTSKERHEMQNPNFTISGQEF---LSKSRFYEHLALEKSSSNL---SVSGQPFCTV--PATRNEKR---------RHLNTPAKPVKVFVPPFKTKSHFH-------RDEQCISKNTNLEENKQNPEKIDE------HGPGESETNINDGGIHQLKKNNSSQ-AATIIFTKCEKEP-L-DLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTVP-RISLRGAVEGRVPSPCSHKQLYMYGVSEHCVKINSKNAESFQFHTEDYFGKEELWSGEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-RYDVEIDRSRRSALKKIMERDDTAAKTLVLCISEIISSSVDI-----SETSSSKT---NSMGTK-KVGIIELTDGWYAVKAQLDPPLSALVKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKIAANSTRRARWYAK--LGFSPDPRPFPLSLSSLFSDGGNVGCIDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEAQQKKLEVLFNKIQGEFEKH-DENITKQCRPS--CALT--RQQVCALQDGAELYEAVANAPDPAYLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQILSR-NVTTVWKLRIISYGKKEKD-SVT---LSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSEKVNIQLTATKKTQYQQLQASDEILCQIYQPREPLNFNKLLSPDFQPPCSEVDLVGFVISVVKKIGPSLLHPKDFEPGLAPLVYLSDECHNLLAIKFWIDLN----EDIIKPHTLIAASNLQWRPE----AKSRIPTLFAGDFSRFSASPKEGHFQEIFHKMKNTIE-NIGMFCNDAENKLMHILDTNGPMLSTPTKDYASEPYTAQTV-----LGMGNK--FLMSSPSGEMNYQSPLSLSKP-KEKSVPTT-------GSAQMTSKSYHKGEKEMDDPKNCKKRK-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRACG-TK----Y-ETPIRKKEFNSPQ-MTPLK-FNDL-SLLESDSIADEELALINTQALLSGSAGENQLMSLSDSTKTAPE-----------------NLKDYFRPKRHSLASGA--TGCWSPQAHTEERETN---VQD-------------------ASSMKRASVRLQRRQKQ--K","is_aligned":1},"location":"GL897055.1:4516525-4575778","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSMPUP00000001928"}]},"branch_length":0.031987,"id":{"source":"EnsEMBL","accession":"ENSMPUG00000001945"},"taxonomy":{"scientific_name":"Mustela putorius furo","id":9669}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Caniformia","id":379584}},{"exon_boundaries":{"boundaries":[28,119,164,191,208,247,270,313,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MPVGCKERPTFFEIFKTRCNQA-DLGPISLNWFEELSLEAPPYNSE---PTEESGYKIS-YEPNLFKTPQRKP--YNQLASTPIVFRE--------PI--YQQSPLKELDKYRLVSGKD--ITDSKHKSCCTMKSKMDRANDVTSPPLNSY---LSESP-VLRCTHVTPQRE----------K-SVVCGSLFHTPK--LMK-GQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLI-VRDEEVSAAVFPNDT--TAIFK----SCFSNHDESLKKNDRFIPCGPGKENKNQR-EAKSQS----LGNSFGKVNSTKDHFVK--------S-TPNVLED-EVHEKVLDV-SEEEDSFSLCVPKYKTRNL-QKIKTSK--TRKNIFNETKT---SECE-E-AKKQMKENKHSLVSEMEPNDSHPLDWNVTH---EK-PFGNGTDKISKEIVLSS-ASGCSDLTLSS-LNGAQMEKTPL----LH-TSYDQNNSEKDLIITDKEC-TNFITLENSWPQISNVPKYSEKTLNEEIVVNKINEGQCLESHEDSVVSVKQAIY---ETTLI-------ASPLQGIRKSIFRIRESPEGMSNA-MF--------SN--NMTNPNFKEP-E-ASESGLEKHTICSQKEDSLCTSSIDDGSWPATIKHTSV--ALKNLGLISSLKKKTKKFIYVINDETSNQGLKTQKDQESRLINLST----QFEANAFEGPLTFTNADS-GLLHS----SSIKKNCLQNDSEKPALSLTSSFGTILRKVSSNGASSPNNKIISQDPDYKEAKINKKKLESFITTETDCLSSLQEKHWEDDAKK-PRVSDIKEKVLPTASHPPVPHS-EVEGNDI----HFQ------SPESFSFDCDNTS--LLTPSSR----DSPSSLVVMSRGKESY-KISEKLKCKNHETGFEL-TK-------NIPMEKNQDIHVLNADSKN----AKLLSTEKHITVASSSVKVQFNQNANLTTIQKDQ---KETTLISKIT-VNPNSEELFPDDENNFVLKITNESNTPVLGNTK-ELHDSNLCCVRDSVPKNSTMV--VCTDLDDKQTAKVSIMKDCYSS-S-IDDLTERNRSTIKQQLKMTLD-----QDSKSDITSDI-VRKSNGNSDYMDNWA----------R---LSDPISNHSFENGFKTASNKEIKLSENNIRKSKMLFKDIEEH-YPTNLACLE-------------IVNTSS-------L--ESQKKPSKSHALDPQSINIISGFVQNSTYVSDSESGHTAP--------------------PTLSLKQDF--------DSNRNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSHIIQKNP---FEMPE----NQLTILNSTSKEWKDDDLHLTTN--------APSISQVD-SKKSEGIIG-GKQKFACLSRTSCNRSAS-GYSTDKNEV---------------EFR------------GFYSARGT-KLNVGSEALQKAKKLFSD-------LENINEE----T-SVEVD-RSFSSSKY--NDS-VSMIQIE---DC--NDKNLNEK-----NNKCRLILQN--NIE-MTTDIFVEEYTESYRRNTEN-E-GNQ--------------------------CTDAG-RNTCNS-ESDGSDSSKN-DTVYIHEEENGLPC-IDQHNIDLKLFSQFMKEGNTQ----IKEGLSDLTCL-EVMKAEETSHVTMSNKQ-QLTANT-GQNIKDFDTFYL--SFQTASRKNIRVSKESLNKARSLLNQKWTEEELNNFSDSLNS--------ELLPGIDIKKTDISNHEVIENTERKDKITKESDLIGT-ENILLILQQRPESKIKKIKESAVL-----GFHTASGKKIEITKESLDKVKNLFE-EKEQD-NSEITNFSHRGAKMSKDREE--CKDGRELACGTTEITTTPEYEETHSSLE-K--K-KLVSNEIAALRPRLLSDNLYKQTENLKISDHASQK-VDVHENTEKETAKKP-TMYTNQSTYSAIENSPLTFYTGHGRKISVSEASLFEAKKWLRE--GEWDDQSERINAAKVNCL---KEYPDDYVENPSCGNSSN-----------SAITENDKN-HLSEKQGSTYLSNSTMSNSYSY--HPGFCHSSEVYNKSEYLSRSKIDNSGIEPVIKNIRERK-NIGFSEIMSPGREADTDPQSVNEDICVEKLATNSS-CKNKN-----TAIKVAISDSNNFNTIQKLNSDSNNSVPAYSTVNSKRVFVAHQT--KVTEGFTD--NCSMV-TKQNTKSKSDTCHAEIVADYP-KALDDSEAI--F-PNS--LGAIE-CSPSHKVFADIQSEQTSQLNQSM---SGLEKVSETPPCQINSKTSDRCEL--PRGKLPKSVSYTNACGIFSTASGKSVQVSDAAIQKAREVFSKL-------E-DSAKQLFPEVSLKDNEEHSEKFTNEENTVIYTSQNLL------------SSAF----SGFRTASGKQVPVSESALCKVKGMLEEFNL-IRTESCLQHSSTSRQD----VSKMPPPSCIGK--RTPEHSRNSKLDKACNKEFRLSSNCNNQSGSSENHHSIKVSPCPSQLKRDKP-QLLVGSKGSLVE-NIHPLGKEQALPKNIKTEIGKAETFPNLPVKTNIEFCS-TYSKDPENYFETE-TVEIAKAFMEDGELTDS------ELLSHAKHFVFTCQNT-KEMVLLNSRIGKRR--------GDALVSVGEPPIKRNLLNEFDRIIKNQETS-LKASKSTPDGILKDRSLFMHHISLEPISCGPF--RTTEERQEIQNPNFTAPGQEF---LPKSHFYEHLASEKSSSNL---SVSRQPFCMV--PATGNEKR---------RHLIAPGKPVKVFVPPFKTKSHFH-------RDEQCISKNTKLEKNKQNSKDIDE------LGSGDSEKNINDSGIHQLKKNNSNQ-AATIIFTKNEKEP-L-DLITNLQNARDIQDMRIKKKQRQHIFPQPGSLYLAKTSTLP-RISLREAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHAQDYFGKEGLWSGEGIQLADGGWLIPSNDGKIGKEEFYRALCDTPGVDPNCISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-RYDVEIDKSRRSAIKKIMERDDTAAKTLVLCISEIISSSADI-----SETSSSKT---SSVGTK-KVGIIELTDGWYAIKAQLDPPLLALVKNGRLTVGQKITIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTK--LGFSPDPRPFPLPLSSLFSDGGNVGCVDVVVQRAYPIQWMERTPSGLCIFRNEREEEKEATKYAEIQQKKLEVLFNKIQAEFEKN-DENITKQCIPS--CALT--RQQICALQDGAELYEAVTNAPDPSDLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEFKKAMESAEQGEQILPR-DVTTVWKLRIISYRKKEKD-SVT---LSIWRPSPDLYSLLIEGKRYRIYHLAASQSKSKSGKANTQLTATKKTQYQQLPASDEILSQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKI------------GLAPVVYLSDECHNLLAIKFWTDFN----EDIIKPYTLIAASNLQWRPE----AKSGIPTLFAGDFSRFSASPKEEHFQETFHKMKNTVE-NIGMFYNDAENKLVHILNANDPKLSTPTKDYASEPHTAQIV-----LGIGNK--FLMSSPNNEMNYQSPLSLCKP-KEKSVPIP-------GSTQMTSKSYCKEEKEMDDPKTCKKRR-ALDFLSRVPLPPSVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ET-LMKKELNSPQ-MTPRK-FNDL-SLLESDSIADEELAMINTQALLLGSPGEHQLVSVSDSTRTAPT-----------------SSKDYLGLKRHSTAPGV--RGPESPQACTRKREPR---VQN-------------------TSDLKRTSLRLQRQQTQ--K","is_aligned":1},"location":"25:7734450-7797815","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSCAFP00000009557"}]},"branch_length":0.042592,"id":{"source":"EnsEMBL","accession":"ENSCAFG00000006383"},"taxonomy":{"scientific_name":"Canis lupus familiaris","id":9615}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Caniformia","id":379584}},{"exon_boundaries":{"boundaries":[28,121,164,191,208,247,270,309,691,748,2767,2800,2826,3004,3066,3129,3188,3315,3369,3440,3466,3538,3593,3652,3743,3799],"number_of_exons":27},"sequence":{"mol_seq":{"seq":"----MPIGCKERPTFFEIFRTRCNKA-DLGPISLNWFEELCLEAPPYNSE---PTEESGYKIS-YEPNLFKTPQRKP--CHQLASTPIIFKEQGLIP---PI--YQQSPLKEL-------GKD--ITNSKHRSCCTMKSKMDQTNDVTSPPLNSC---LSESP-LLRSTHVTPQRE----------K-SVVCGSLFHTPK--LTK-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRDEEASAAVFPNDT--TAIFK----SYFCNHDESLKKNDRFIPSGPDSENKSQR-EAKSQGLGKMVGNSCDKVNSCKDPFGN--------S-TLNVLED-GVRERVADV-S-EEDSFPLCVPKCKTRNL-QKIKTSK--TRKNIFNET-T---DECE-E-AKKQMKENKHSFVSEMEANASDPLDSNVTN---QK-PFGNGSDKISKEVVLSS-ASESCHLTLSG-LNGTHMEKLPL----LCISSCDQNNSEKDLITTEKEC-TNFIILEDSLPQISGVPKCTEKILNEEIVVNKIDEGQCLESHEDSILAVKQAVF---ETSLI-------ASPLQGIRKSIFRIRESPEETFSA-VF--------SN--NITDPNFKEEHE-ASESVLEKHSICSQKEDSLSTSSLDNGSWPATIKHTSV--ALKNSGLISTLKKKT-KFIYVVNDETSYQGLKTQKDQQSGLMNYSA----QFEANVLEGPLTFANADS-GLLHS----S-VKKTCLQNDSKEPILSLTNSFGTLLRKVSNNGSSSPNNKIISQDLDYKEAKIKKEKLQSFISTETNCLSSLQEKHCEDDTKS-QRVADRKEEILPAVSQPSVPYS-EVEDSGI----HFQ------TLKSFSSDPDKSS--QLTPHPR----DPPSNPVGLSRGRESY-EVSETLKCKNHEAGFEL-TK-------T--MENNQEIHVLNEHAKK----AKLLSTEKYVTEASPSMKVPFNQNAHLTIIQKDQ---KETTLISKIT-MNPNSEELFPDGD-NFVFKITKERNVPVLGSIK-ELQDSDLCCVKEPVLENSTMV--VYTDMDDKQAAKVSITKGFDSS-N-IDDLTEKDRNSIKQQLRMTLD-----QDSKSDITLDS-DMKSNGNNDYMDNWA----------R---LSDPILNHNFGNGFRTASNKEIKLSEHNIKKSKMLFKDIEER-YPTNLACIE-------------IVNT-P-------L--ESQEKLSKPHILDPQSINTVSGCVQSSAYVSDSENRHTTP--------------------PTLSLKRDF--------DSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSHLKQKNP---CEMPE----KHLTISNTTPEEQKDGHLRLTIN--------ALSISQGDSSKKFEGIIG-GKQKLACLSKTSCNKSAS-GHLTGKNEV---------------EFR------------GFYSARGT-KLNVCSEALQKAKKLFSD-------LENISEE----T-SVEVGIRSFSSSKC--NGS-VSMFKKE---NC-NNEKKLNEK-----NNKYRLILQN--NIE-MTTGIFVAEDTEGYKRNIEN-K-ANK--------------------------YTDAS-RNVYNFREADGSDSSKN-DTVYIHKEENGLPY-IDQHDIDLKLSSQFIKEGNTQ----IKEGLSDLTCL-EVVKAEETLHVNTSNKE-HLTANTMGRITKDFDIFDV--SFQTASGKNIRVSRASLNKVTNLLDQKCTEEELNNFADSLNS--------ELLSGIDINKADISHHEKMENTERKDK-MKESDLTGT-ENKSLTLQQRPEYEIKKIKEPTIL-----GFHTASGKRIEIAKESLDKVKNLFD-EQEQD-KSEMTNFSHRGTKMSKGREE--CEGGLRLACKTIEITPASKEEEMQKPLE----K-NLVSNEI-VVVPRLLSDNLYKQTENLKIPNRASLK-VKVHENTGKETAKKP-TTCTNQSTYSATENSALSFYTGHGRKISVSQSSILEVKKWLRG--GELDDQPEKT-----------------------------------------------------------------------------------VYNISEYLPKSKVDNSGIEPVVRNVGERE-NTSVSEIMFTVREADTDPQSVNEDICVQRLVTNFS-CKKEN-----TAIKVTVSDSNNFDSTQKLNSDSNDAVPVYTTASSERVLVAHET--KVTEGFTE--NCSMA-IKQTTKSKPG----KIVAGYR-KAPDDSEDTI-C-PNS--LDGAECSSPSHKDFAETQSEQTLQLNQSI---SGFKKRSEIPPHQINLKTSDICKL--STGKCLQSISYTNACGIFSTASGKCVQVSDAALQKARQVFSKV-------E-DSAKQPFSKVSFKHNEDHSDKFTREENTMIHTPQNLL------------SSAF----SGFSTASGKQVPVSESALCKVKGILEEFDV-MRTECGPQRSPTSRQD----VSKMPPPSCVDN--RTPEHSVNSKLEKAYNKEFKLSSNSKIENGSSENH-SVQVSPYPSQFKQDK--QLIQGNKASLVE-NIHLLEKEQALPKNIKMEIGKTEAFPNLPLKTDTAIHS-TDSKDPENYFETE-TVEIAKAFMEDGELTDA------DLLSHARHFLPTCQHS-EETLVSNSRRGKRR--------G-VLVSVGEPPIKRNLLNEFDRIIKNQEKS-LKASKSTPDGIIKDRSLFMHHISLEPVTCGPF--STTKKRQEIQNPNFTAPGQKF---LSKSHFYEHLALEKSSSNV---SISGQPFCTV--PATRSEKR---------GHSITPSKPVKVFVPPFKTKSHFL-------QDEQHISKNTHVEENKQKPNNIDE------RSSGDSKNNINNSEIHQLNKNNSSQ-AATMVFTKCEKEP-L-DLIASLQNARDIQDMRIREKRKQRIFPQPGSLYLAKTSTVP-RISLRVAVEGRVPSACSHKQLYMYGVSKHCVKINSKNAESFQFHTQDYFGKEVQWAKEGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPNLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY--YDMEIDRSKRSAIKKIMERDDTAAKTLVLCISETISSSTDL-----SETSGSKT---SGVGTK-NVGIVELTDGWYAIKAQLDPPLLALVKKGRLTVGHKIIIHGAELAGSPDACTPLEAPESLILKISANSTRPACWYAK--LGFFPDPRPFPLPLSSLFSDGGNVGCVDVVIQRTYPIQWMEKTPSGLCIFRNEREEEREATKYAEAQQKKLEVLFNKIQAEFEKH-DG-----------------KMGFCALQDGAELYEAVKNAPDPASLE--AYFSEEQIRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQMLPR-DVTTVWKMRIISYGKKEKD-SVT---LSIWRPSSDLYSLLTEGKRYRIYHLATSQSKSKSERAHIQLTATKKTQYQQLPASDELLFQVYQPREPLYFNKLLDPDFQPPCSEVDLIGFVVSVVKKI------------GFAPLVYLSDECHNLLAIKVWTDLN----EDIVKPHTLIAASNLQWRPE----SKSGIPTLFAGDFSRFSASPKEGHFQETFHKMKNTIE-NVDTFCNDAENKLVHILNANSPKVSTPTKDYASEPHTIQTV-----LGLGNK--LSMSSPNSEMNYQSPLSLCKP-KAKSVPTP-------GSAQMTSKSCYKGERELDDPKTCKKRK-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPIKKRELNSPQ-MTPLK-FNDT-SLVESDSIADEELALINTQALLSGLAGEDQLMSLNDSPRTAPT-----------------SSKDYVRPKSYPTAPGI--RDCENPQASTEGGEPD---VQD-------------------TDTVKRSSMRLQRRQQQ--T","is_aligned":1},"location":"A1:11398212-11455078","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSFCAP00000019777"}]},"branch_length":0.054197,"id":{"source":"EnsEMBL","accession":"ENSFCAG00000025587"},"taxonomy":{"scientific_name":"Felis catus","id":9685}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Carnivora","id":33554}}],"confidence":{"value":4,"type":"boostrap"},"taxonomy":{"scientific_name":"Laurasiatheria","id":314145}},{"events":{"type":"speciation"},"branch_length":0.017987,"children":[{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,569,748,754,2768,2801,2827,3005,3067,3130,3188,3316,3370,3420,3467,3539,3594,3653,3744,3800],"number_of_exons":28},"sequence":{"mol_seq":{"seq":"----MPIGCKERPTFFEIFETRCSQA-DLGPISINWFEELSSEAPPYNSE---TAEESEYKSSSYEPNPFKTPQRKP--YHQLASTPVIFKEHGLTL---PL--YQ-SPLKELDMDRLDLGKH--VTNSKYKSCCTMKAKMDQANDVIIPPLNSC---LSESPGILRCTHVTPQRE----------K-SVLCGSLFHTPK--LMK-GQTRKHISESLGAEVDPDMSWSSSLATPPTLSATVLI-VRDEEESSAVFPNDT--TDILK----SYFSDHDEGLKENDRFIPSGPNNEIKSQR-EAKSYGLGNPLG----KVSGCKDHFGK--------S-VPNVPED-EVHEKVGDI-S-EEDSFSLCVSKYKKRNL-QKIKNGK--TRKNIFSETKN---DECE-ETTKKQIKDNKQSFISKMEPNDSDPLDSKLRI---QK-HLGNGSGRISEEAVQSP-VFEWSQLTLSG-INGTQIGK--I----LQNSSCDQNNSEKDLIGTEKEC-TNFITLENSLPRISSVPK-T-----------------------------EKILS---ETSLI-------ASPLQGIKKSRVRIRESPEETPSA-VF--------SN--NMTDLNFKEDPE-ASEGRLEISTIFSQKESSLCTSSINNGSHPVTIKHTSV--ALKNTGLISTLRKKTKKFIYTINDETSYQGLKMQKDQESGLTNYSA----QFEENTFEAPSTVLNADS-ECIHS----ASVGKNCLQNDSEEPTLSLTSSFGRILRKCSNNESSSSNNEIISQDLDYKEAKINKEKLQSFITTETDHLSCLQEKYCEEDPE--HQILDIKEKVLPVIFHPAMPHS-EMKCSGI----HFQ------SQESILYDLDNTS--ILTSGSK----DPPSNPVVISRGKESY-EASEKVKFKNCEPGFNL-TK-------NIPMD-NQEICVLNENSEK----VELLSPEKYTILASPSLKVQLNQTTNLTVTQNVQ---EKTTSISKIT-VNSNSEELFQDNKKDFAFEIIDEWNIPLLENNE-ELQEADISCVREPILKHSIMV--VDTGTDDKQVAKASITKDFDSS-NVVHDLTENRKRVMQ---KMILG-----EDSKADMSLDI-DKKSNQNNDYMDTWS----------E---LSDPISNHNFGHGFRTASNKDIKLSEYNIKKSKEFFKDIEEH-FTTTLACIE-------------IVNPSL-------L--ENQKKLSKPHPLDGQSTDTASGCEHSSALASDSENSHTTP--------------------PTSSLKRDF--------NSNHNLTPSQTAEITELSTILEESGSQFEFTQFRK----PSHMMQNNP---LEIPE----NQISALHTTSEEWEGVD------------------PLMDSSRKL----E-DKQKSACSLQTSCNKNAA-GYSTDKNEV---------------EFR------------GFYSARGT-KLNVSSEALQRAVKLFSD-------IENISEE----T-SAEVDPRSFSSSKC--NDTIVSVFQME---NC--NHKNFNEK-----NNKYQLVQQN--NIE-MAAGIFVEENSEDQKKNTAS-E-D-K--------------------------SIGAR-RNICNLGESDSHDLNKN-DTVCVHKDENGLPCVIDQHSIHLKSSGQFMNGGNTQ----VKEGVSDLTCL-EVVKAEEICHVHTSNKQ-QLTASKMEQNIKDYDIFDI--SFKTASGKNVRVSKDSLNKAMNFFYQKCAEEELNNFSDALNS--------ELLSGINVNKIDISSYEATDMV--KDKTLKESDSVGI-ENQLLTLQTEPECEIEKIKEPTML-----GFHTASGKKVKIVKEYLDKVKNLFD-EKKQD--SETTNYSHQRVKMLKDREE--CKVGFPLACETVEITTAPKCEEMQNSLM-E--K-KLVSNEF-AMLPGLLSDNLYRQTGNFKMSNSVALK-I---GNVEKETAKSPTTCYRNQFTCSASKNSAVAFCTGHGRKFSVNQASLLE---------GELDDQPEEINAAKVTCL---KDNPEDYVENPSCGNHSN-----------SIIIENDKN-HLSEKQDSTYLSNSSMSNSNSD--HSDFCHSNEIHDKLESLSK-KGDNFGIEPIVKNVKEKK-HTNFSEVIATIREANTYPQTKNEDTCVQKFVTNSSPYKNKK-----TDMEVAVSNSNNFEI----------QSPAFSTASGQMVSVSHGM--KVRERFAD--NCTKV-IRINTENKSGTGHTKTLTGYH-EVVGDSEDFI-F-PNS--LDSEEHSMHSYKVFTGIQSEQILQHSQRM---SRSETVSEMLPCQSNLKASATCKF--N--------TVSNACGIFSTASGKCVQVSDAALQKTRCIFSKL-------E-ESAEQLFSKVSFESNEEHSDRLTREENTMIHIPPNLP------------SPAF----SGFSTASGKQVPVSESSLNKVKGMLEDFDS-LRTEYGLQNSPTSGQV----VSK-LPLSCIDK--RTPKYSASCKMEKACNKEFKLSNNCNIRSGFSENTPSLETLPCLSQFKQDEQ-PLVLGNKVSLVG-SSHILGQEQALPKNIKIDM-KPETYPNLPMTTNTEICS-TYSKDPENYFETE-AVEIAKAFMEDGDLTDS------ELLSHPEH-FLTCQ-N-KEMALLNSRTGKRR--------GDALFLIGEPPIKRNLLNEFNGIIENQEKS-LKASKSTPDGTIKDRRLFMHHISLEPITCGPL--CTTKERQKIQTPNFTEPGQEF---LSKSHFYEQPTLEKSSSNL---SISGQPFYKV--PATQNKKR---------RYSITTGKPVKVFVPPFKTKSHFH-------RDNQCLGSNTDLEENKQKKENIGE------HGSGHSKNNINNSEIHQPNKDNSNQV-ATIISTKCEEEP-L-DCIANLQNARDVQDMRIKKKHGQQIFPQPGSLYLAKTSTVP-RISLKVAVEGQVPSACSHKQLYMYGVSKHCLTINSKNAESFQFHTQDYFGKEASWAGKGTQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRGWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-RYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEILSPTTSL-----TETSNSKT---SGVDTS-KTAIVELTDGWYAVKAQLDPPLSALVQKGRLAVGQKIITHGAELVGSPDACAPLEAPESLMLKISANSTRPACWYAK--LGFSPDPRPFPLPLSSLFSDGGNVGCVDVVIQRAYPMQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQRKLEALFTKIQAEFEEH-EENITKQCTPS--HALT--RQQVCALQDGAELYEAVRTVPDPSYLE--GYISDEQLRALNNHRQMLNDKKQAQIQLEFRKAVESAEKGEQMLSR-DVTTVWKLRIISYEKKEKD-SVI---LSIWRPSSDLYSLLTEGKRYRIYHLATSKSKTKSGRANIQLTATKNTQFQQIPASDEILFKVYQPRDPLPFGQLLNPGFQPHCSEVDLVGLVVSVVKKI------------GLAPLVYLSDECHNLLAIKFWIDLN----EDLIKPHMLIAASNLQWRPE----SKSEIPTLYAGDFSMFSANPKESHFQETFHKMKNTIE-NIDRFCNDAENKLMHMLNAKDPKCSTPTKDYTSEPHTVQTV-----HGRGNT--FLMSSPKSEMNYQSSLSLCKP-KGKSVPTP-------VSAQMTSKS-CKGEKEVDDQKNCKRRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPIKKKELSSPQ-ITPLKKFNDI-SVLESDSIADEELALINTQTLLSCSAGKKQLVSMGESTGTAPT-----------------CSRYDLERKRHHFTPMV--TEQ-NSHISTGETGDS---IQD-------------------TSTIQDTSKGLQRQQNR--K","is_aligned":1},"location":"GL429786:4166192-4250116","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSMLUP00000012516"}]},"branch_length":0.065084,"id":{"source":"EnsEMBL","accession":"ENSMLUG00000013741"},"taxonomy":{"scientific_name":"Myotis 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vampyrus","id":132908}}],"confidence":{"value":92,"type":"boostrap"},"taxonomy":{"scientific_name":"Chiroptera","id":9397}}],"confidence":{"value":13,"type":"boostrap"},"taxonomy":{"scientific_name":"Laurasiatheria","id":314145}},{"events":{"type":"speciation"},"branch_length":0.017586,"children":[{"exon_boundaries":{"boundaries":[28,67,82,122,165,192,208,209,248,271,310,749,756,789,790,2037,2038,2103,2297,2300,2401,2424,2504,2510,2770,2803,2831,2834,2836,3008,3070,3133,3191,3319,3373,3425,3470,3542,3597,3656,3747,3803,3355],"number_of_exons":44},"sequence":{"mol_seq":{"seq":"----MPVGCKERPTFFEIFKRRCNEA-DLGPISLNWFKELSSEAQPYNFE---PAEESEYKAVSYEPTLFKTPQRKP----QMVSTPVIFKEQNQ-----PL--CT-SPSKELDKYRLNLGKD--ITNSKHKSYCTTKTKMDQACEIASPSLNSY---LSESP-VLRYTHGTPQRE-----------KSMICGSLFHTPRF--MK-GQTPKRISESLGAEVDSDMSWSSSLATPPTLSSTVLIE-RDEEASAAVYPNDTT--AILK----SCFFNYDESLQKNGRFVHSGLENESKNLG-ESESHXXXXXXXXXXXXXXXXXXXXXX--------X-XXXXXXX-XXXXXXXXX-X-XXXXXXXXXXXXXXXXX-XXXXXXX--XXXXXXXXXXX---XXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXX-XXXXXXXXXXXXXXXX-XXXXXXXXXXX-XXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXX-------XXXXXXXXXXXXXXXXXXXXXXXX-XX--------XX--XXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXX-XFLHS-----S------VNNSEETTLFSANSLGMNLRKCSSNKT-FSGNKIVSQDLDSKGEKIKKEKLHSYIATATD-VSNLQQRHCADNPKN--RVSDAEEKVLPSASHPAMPHS-KVEYKDD----HFQ------SQERLLYDHGSFS--TLVPTAM----VPPSSPAVNFRANES-YKISKKLQNKEREAGVEV-TT-------NTPMKKNEKKCVLNENFKK----AEQLPPEQYRPL-SPSVKVQVTQSSSLTLIQNDQ----EETLISNVI-VNSNPEELFPESENS--FHITGERSVPVLENIE-ELYVADLSSIKEPISENDTMV--AFTDIVNKQEAKVLITKDFESS-DVVHDVTEK-RNSVKQKLNMTTS-----QDSKLDIFLDT-NVNSDGSSEHMDRQT----------G---LSNVISNHSFGNGFRTASNKKIKLSENNIKKSKMLFKDIEEQ-YPPNLACTE-------------IVNNLG-----------IQEKLSKPHGLDSQSTNTVSGCVQNGILVSTSENTHAVP--------------------PILSLKQDP--------NLNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSHTQRNNQ---FEKPE----KQMTVVNTSSEEWKDTG-HLTVN--------APSTNQVN-SKKLESAAE-GKQMFPCLLKTSYNKSPNSNYSTDKNKT---------------EFR------------GFYSALGT-KLNVSTTALQKAMKLFSD-------IDNISEE-----ASAELDPGILFSDKY--KDSVVSASKIE---NY--NDENLNK----------QLTFQN--STG-MTTGIFAIDNTDRCKRDKES-E-DNK--------------------------HTCAS-RNICNIGEPDGNDSSTN-DRVYIHKGENDLPH-SDQHNAVLKLPSLLMMEDNTQ----I-EGLSDLTCL-EVVKAEETFCVNSSNK-EQLTS-KMGQNTKDPGIFHL--SFHTASGKNIRVSKESLSKVVHFFDEKYTEEELNSFSENMDA--------DFISDINMNKTDILSHVETDMV--KDKILIGHDPNNT-KNHLLTLQQQPECEKRMINEPTIL-----GFHTASGKEVKVAKDSSEKVKNLFD-EKKKGSTSEISNIKCPAAAAVGERDD--CKERLELACEAAGI-TVTKYKHVQKSL-EE--K-KVISHEI--------SDNLHTQAENLRTPNNISPK-VKQCETIEMDTVRT--------STCSTIENSTIAFYTGHGRKISVTQVSLLKAKKWLHE--GESNDEPEEENAV-------------NYVGNPLSRNSSK-----------SILTENQ----LSEKQDSTYLSNRKMYNRYLY--HSDFCHSNEAHSKSEYLSENEIGNSDIEPVLENVKARE-NSSSSEII-TVREGSTYPQTVNEDMCVLKL-NSSSPCINKS-----TANQLTVSDLKTFEIGP----------P-----SGKTDFAAHE-----KERLTD--SCSKV-INQNIDNKPGSYQTNFVADYH-KALGDVND----------ISPKECSVHSLKVFADSQDKQVLQHNQSM---PELEKVPEIPPCKFNLKLY-MCKF--NMVKFSKSVSSTNTGGIFSTASGKSVQVSDAALQKARKVFSKL-------EEDSADQLLSKESLKNS-EHSDNLTRDKSTVVHTPQSK-------------SSTI----CGFSTASGKQVSISKSALNKVKGMLEEFD-LIGAECSLRHSPTSGQD----ILKI-SLSCNDK--STPEHSVNSKTEKACNKEFKLSSNCNIRSDSSEDTHFTDVSPYLSPFKQDKQ-QLELGTTISVIEKNSHPLEKEQALPQNTKIELSKTETY--LPQKANTEVCS-AYSKDPENYFETE-AVEIAKAFMEDGELTDS------ELLSHDKHSSFTCNEH-EEAGTQNSGSGKRK--------RDALVSVGEPPIKRNLLNEFDRIIENERKS-LKASKSTPQXXXXXXXXXXXXXXXXXXXXXXX--XTPDG--EKQSPNFTAPTQEF---PSKSHFCELLTVEKSSSNL---GISEQPFHNAP--A-RNER----------RHSITTSKLMKVFVPPFKTKAHFH-------RTEE-----SDLEENKNEPKSTNE------HRSGDSENNINESEIHQLNKNDSSQT-TTLIFTKCE-EP-L-DLITALENARDMQDIRIKEKQKQHIYPQPGSLYLTKTSTMP-RISLKTAVGGQVPSVHSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVNPNLISRLWVYNHYRWIIWKLAALEFAFPKEFANRCLTPERVLLQLKY-RYDVEIDKSRRSAIRKIMERDDTAAKTLVLCVSQIISSSTNI-----SETSSSKT---SSIGAK-NVTTIELTDGWYAIKAQLDLPLLALIKNGRLTVGQKIIVHGAELVGSPDACTPLEAPDSLMLKISANSTRPACWYAKLG--FFLDPRPFPLPMYSLFSDGGNVGCVDVIIQRVYPIQWVEKTSSGLYIFRSEREEEKEAAKFAEAQQKKLEAIFTKIQAEFEAHE-XXXXXXXXXX--XXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXX--GSLSEEQFRALNNHRQMLNDKKYTQMQLEFRKAMESAEQDKQILS-RDVKMVWKLRIVTYGKKE-D-SVI---LSIWHPLSDLYSSLTEGKRYRIYYLATSHSKSKSERASVQLTATKKTQYQQLPASDEFLFQVYQPRESLHFNKLLDPDFQPPCSEVDLVGFVVSIVKKK------------GLAPLIYLSDECHNLLAIKFWIDLN----EDIIKPHTLITASNLQWRAE----APSRMPTLLAGDFSIFSASPKEGHFQEAFHKM-NTIE-DIDTFCSEAENKLMYILNANDLKWSTPTKDYTSERHTTQTI-----LDTGNK--FLLSPANSGMNHQSPLPLCKS-KGKSVSIP-M------SAQRTP------QKETDDPKHCRKRK-ALDFLSRLPLPPPVSPVCTFVSP-AAQKAFQPPRRCG-TK----Y-EMPVRKKESNSLQ-VNPLKNLN-I-SLSESDSIADEELALINTQALLSDSGGENQLLSISERTKTIAT-----------------SSKGN-RLKRHYTSPVS--KKQENSQASEEEQKTS---VQD-------------------TSIKKHI-------------","is_aligned":1},"location":"GeneScaffold_4361:961-62824","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSEEUP00000008968"}]},"branch_length":0.12134,"id":{"source":"EnsEMBL","accession":"ENSEEUG00000009739"},"taxonomy":{"scientific_name":"Erinaceus europaeus","id":9365}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,743,1987,1989,2101,2767,2800,2826,2871,3005,3067,3130,3188,3316,3370,3420,3467,3539,3594,3653,3744,3804,3364],"number_of_exons":31},"sequence":{"mol_seq":{"seq":"----MPVGCKERPSFWEIFQTRCNQA-DLGPISLNWFEELSLEAPPYNSEIIFPVEESEYKTNSHEPSLFKTPQRKP---YQLASTPIIFKEQGLNL---PL--NQ-SPSRELHKYRLLLGKD-----NKHQGYCTVKTKLNHTNEVTSPLPNTC---LNESPVGLHCTHVTPQRE----------K-SVVCGSLFHTPKL--IK-GQTPRRISESLGAEVDSDMSWSSSLATPPTLSSTVLI-VKEEESRTAVFPNDT--AAVLK----SYFSNYDECLRKNNRIISSGPINES-SQK-ETTSQELGEIQDNSSWKVNNHKDQFGK--------S-VPNVLKD-EIHETVSDV--SEEDSFSLYVSKYKTRNL-RKIKIGK--SRKNIFSESNM---NEYE-E-PKQQLEKNKHLFVSEVEPNYNIPSNTSVTTQ---K-LFGNGSDEISKETVLSS-GSQRVQLTPSG-ENGIQMKKMPT----LYTSSCGQSNSAKDCIDTEKDC-TSFIILENLLPEILDTSK-TENVVDEETVVNKGDVGHCLISHEDSTPVTKPTVA---NTSLV-------ESPHEGIKKSVFRIRESTEEPLSE-VF--------SN--NITDPNFKEETK-DSEKELEVNAICLQKEDSLCPNLVDNGSQPASIEHTSA--ALKSEGLISTLKKKKKKFIYAINDETTCQGEKLLKDRASQLSNYST----QFEANTFEVPLTVTNTDS-GLMPF----S------SKKITEEPAFSLNSSYEVNLRKCSSNESSSSKTKRLPQVLD-------DKKLQSCIITEAAYFSSLQEQHCMDNPKS-HSVSDIKED-FPITYHPGAPNSE-VDCSSM----LFP------SQERFLYDHGNTS--ILTPNPR----AIPSKPAMVSIVKKSN-KMPEKLKSKNCEADFEL-TN-------NIPMEMSR-LCVFSENSQK----TELLISKNDIT--ASSIEIQVNENPDSTVIQKDQ---EETTLISNIT-INSNSEELFPEYGNNFVFQMTNERKIPALENIE-EPYEADLSCVEESILKNSTLI--AYGDLDDKQTAKVLIAEDFSSS--VIHDFTE-NINSIKQQVSRTLG-----QDSESDI-LNI-EVKSNRNNEYVDKQT----------V---SSAPVLDQNFGKGFRTASNKEIKLSEHNVQKSKMLFRDIEEQ-YPTSFACAE-------------ITNTLS-------S--DVEKKQSKPLVLDSQSNNNVSRYVQNSAFASSSKNSHKIP--------------------PVLSLKLCL--------SSNNNLTPSQKAEVNELSTILEESGSQFEFTQFRD----PDHIEQNYP---LEASE----NHMILSSTTCEECKDSH-HDALN--------SPSTSQVN-SKKYKDTFG-DKQNFAHLLKTSCTKNAS-GCLTDK-EV---------------EFK------------GFYSALGS-KLTVSNKALQKAMKLFSD-------IEKISEE----T-SAELDSESLFSSKY--GS-----IRTE---NY-TSDNINTE-------NKCQLILQN--NVE-MTTDIFV-ENTKDYKREKEN-E-D-RY--------------------------IGAS-INICNIGKSHCSDTSKN-DT---DSNKNDFPC-NNQRNKCLKLSGPCMKEGSIQ----IKEGLSDLTCL-EVVKTEELFYINTSSKE-QLTVKKMVPNTKDFYSCDV--YFQTASGKNITVSKESLSKVVNLFDEKCTEEESDNLPSSLNS--------ELFSTKHMKK-SISSHEETAKI--EDKILKEKEPVGN-KNQL-TLQEQAERETEKSKEPFIL-----GFHTASGKKVKVAKESLDKVKNLFD-EEKQC-IGEIINTNHEGLKTLKDREE------PEVTCETIEI-IVPKCEEREKSPE-E--K-RLIPNET-AVPPGLLSDHLHTQRENLKISNSISLK-VKAHEDTEKQQAEVPITCSTNQSTCSVTGNSTLAFYTGHGRKISVSQASLFEAKKCLRE--GKLDDQPEAINAA-------------GYVGSPLSENSSS-----------CILTG--KS-HLSGRKDSAYLSKRSMSNSSSY---SESSHSNEVYSKSELLSKNKVDHSGIEPVMKDAKDEK-DSSFPEVVSTLREANIYPQTVNGDIYAKKL-SNCSPCNNKD-----AANKLAFSDY--FETES----------P---SADGEKDFVSHDT-EEIRERLVD--SYSKV-IKQNSASTSGTCQTKIVAGCH-EVLDDLKDPL-F-SKS--LD-EECNMHSHKVFTDDQSEQSLQQNQNK---SELEKVSKKSPCQLNWKTSDICKL--NVGNFSSSVSFKNACGIFSTASGKAVQVSDASLQKARQVFSKV-------E-DNADQPFSEV-FKNNREHSDKYTKEKSTVIHSASKSL-------------PAFS----GFSTASGRKVSISESALNKVKGMLEEFDS-IRTECGLQHSPPSRPD----ASEILPFSYVAK--NTSEDLVNTTMESAYRNKFNHSDNYSIESDSSENSHLTTVLPSLSEFKQDKQ-QLILGIKASVVE-NIHCLG-EKAIPESTERKIDKTETFSNLPVKTTTELRS-TYSGDPGNYLETE-AVAIADAFMEDGELTDS------ELLCHAKH---------EETISLNSSIGKRR--------GDASVSVGEPPIKRNLLNEFDRVMEKQEKS-LKALKSTPEGTMKDRRLCMHHVSLEPITCGPP--CATKKLQEKQSPNFTAPGQEF---MSKSQFYEFNLTLEKSSNL---SVSEKLFYEV--PTTXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXX--X-XXXXXXXXXXXX-X-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXLYMFGISKHCLKINIKNAESFQFHIQDYFGKKDLWAEKGIQLADGGYLIPSNDGKAGKEEFYRALCDTPGVDPKLISRLWVYNHYKWIIWKLAAMEFAFPEEFANRCLSPERVLLQLKY-RYDMEIDRNRRSAIKKIMEKDDTAAKTLILCVSGITSSGTNI-----PEASTSKN---NSVDTK-TVTLIELTDGWYAIKAQLDPPLLALLKNGKLTVGQKIIIHGAELVGSPDACTPLEAPESLMLKXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXNARKRCIPS--HALT--RQQIHALQDGAELYEAVKNAPDPGDLE--GYFTEEQLKALNNHRQILNDKKQAQIQLEFKKAMESTEQEEQILSR-DVKTVWKLRIISYEKKEKD-SVL---LSIWRPSSDLYSLLTEGKRYRIYQLITSKSKSKSERTKMQLTATKKTQYQQLMTSDELLFQVYQPRTSVPFNKLLDPDFQPPCSEVDLIGFVVSVVKKI------------GLLPLVYLSDECHNLLAVKFWIDVN----EDIIKPRMLIAASNLQWRPE----SKSRIPTLFAGDFSMFSANPREEHFQETFHKVKNSVE-NIDVFCSDAENKLMHMLNADDPKWSTPTKDYTSEPHTVQPV-----LDTGSK--CLMSP----ISYQSPLLLCKT-KGKSVSTP-------VSAQMTSKFCC--QKETDDPKTCKKRR-ALDFLSRLPLPPPVSPMCTFVSP-AAQKAFQPPRRCG-IK----LNETPIKKLSLNSPQ-MTPLKKFNDS-SFLESDSIADEELALINTQALVSGPA-ENQLMS-TKSARTAPS-----------------CSKESLRLKRHHTATAV--KDQEDSCDSMEERDIS---AKKYF-------------------------------------","is_aligned":1},"location":"GeneScaffold_591:245736-329655","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSSARP00000002541"}]},"branch_length":0.129433,"id":{"source":"EnsEMBL","accession":"ENSSARG00000002755"},"taxonomy":{"scientific_name":"Sorex 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AFQPPRSCG-TK----Y-ETPIKKKELNSPQ-MTPFKKFNEI-SLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPT-----------------SSEDYLRLKRRCTTSLI--KEQESSQASTEECEKN---KQD-------------------TITTKKYI------------","is_aligned":1},"location":"13:32889611-32973805","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSP00000439902"}]},"branch_length":0.00202,"id":{"source":"EnsEMBL","accession":"ENSG00000139618"},"taxonomy":{"scientific_name":"Homo 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troglodytes","id":9598}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Homininae","id":207598}},{"exon_boundaries":{"boundaries":[27,121,163,191,207,247,270,309,743,785,2286,2767,2800,2826,3004,3066,3129,3187,3316,3344,3360,3376,3389,3399,3413,3419,3466,3538,3593,3652,3743,3799],"number_of_exons":33},"sequence":{"mol_seq":{"seq":"----MPIGSKERPTFFEIFKTRCNKAVDLGPISLNWFEELSSEAPPYNSE---PAEESEHKNNNYEPNLFKTPQRKPS-YNQLASTPIIFKEQGLTL---PL--YQ-SPVKE-------LGRN--VPNSRHKSLRTVKTKMDQADDVSCPLLNSC---LSESPVVLQCTHVTPQRD----------K-SVVCGSLFHTPK--FVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRNEEASETVFPHDT--TANVK----SYFSNHDESLKKNDRFIASVTDSENTNQR-EATSHGFGKTSGNSF-KVNSCKDHIGK--------S-MPNVLED-EVYETVVDT-S-EEDSFSLCFSKCRTKNL-QKVRTSK--TRKKISHEANA---DEC-EK-SKNQVKE-KYSFVSEVEPNDTDPLDSNVAN---QK-PFESGSDKISKEVVPSL-ACEWSQLTLSG-LNGAQMEKIPL----LNISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPK-SEKPLNEETVVNKRDEEQHLESHTDCILAVKQAIS---GTSPV-------ASSFQGIKKSIFRIRESPKETFGA-SF--------SG--HMTDPNFKKETE-ASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQTSV--ALKNAGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSA----QFEANAFEAPLTFANADS-GLLHS----S-VKRSCSQNDSEEPTLSLTSSFGTIL----RNET-CSNDTVISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKS-KKVSDIKEEVLAAACHP-VQHS-KVEYSDT----DFQ------SQKSLLYDHENASTLILTPTSK----DVLSNLVMISRGKESY-KMSDKLKGNNYESDVEL-TK-------NIPMEKNQDVCALNENYKN----VELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQ---EETTSISKIT-VNPDSEELFSDNENNFVFQVANERNNLALGNTK-ELHETDLTCVNEPIFKNPTMV--LYGDTGDKQATQVSIKKDL------VYVLAEENKNSVKQHIKMTLG-----QDLKSDISLNI-DKIPDKNNDYMDKWA----------G---LLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQ-YPTSLACVE-------------IVNTLA-------L--DNQKKLSKP-----QSINTVSAHLQSSVVVSDCKNSHITP--------------------QMLFSKQDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSYILQKST---FEVPE----NQMTILKTTSEECRDADLHVIMN--------APSIGQLDSSKQFEGTVE-IKRKFAGLLKNDCNKSAS-GYLTDENEV---------------GFR------------GFYSAHGA-KLNVSTEALQKAVKLFSD-------IENISEE----T-SAEVHPISLSSSKC--HDSVVSMFKIE---NH--NDKTVSEK------NKCQLILQN--NIE-MTTGTFVEEITENYKRNTEN-E-DNK--------------------------YTAAS-RNSHNL-EFDGSDSSKN-DTVCIHKDETDLLF-TDQHNICLKLSGQFMKEGNTQ----IKEDLSDLTFL-EVVKAQEACHGNTSNKE-QLTATKTEQNIKDFETSDT--FFQTASGKNISVAKESFNKIVNFFDQKPE--ELHNF--SLNS--------ELHSDIRKNKMDILSYEETDIV--KHKILKESVPVGT-GNQLVTFQGQPERD-EKIKEPTLL-----GFHTASGKKVKIAKESLDKVKNLFD-EKEQG-TSEITSFSHQWAKTLKYREA--CKD-LELACETIEITTAPKCKEMQNSLNND---KNLVSIET-VVPPKLLSDNLCRQTENLKTSKSIFLK-VKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLREAKKWLRE--GIFDGQPERINTA-------------DYVGNYLYENNSN-----------STIAENDKN-HLSEKQD-TYLSNSSMSNSYS--YHSD-----EVYNDSGYLSKNKLD-SGIEPVLKNVEDQK-NTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKN-----AAIKLSISNSNNFEVGP----------PAFRIA-------SDETIKKVKDMFTD--SFSKV-IKENNENKSKICQTKIMAGCY-EALDDSEDI--L-HNS--LDNDECSTHSHKVFADIQSEEILQHNQNM---SGLEKVSKISPCDVSLETSDICKC--SIGKLHKSVSSTNTCGIFSTASGKSVQVSDASLQNARQVFSEI-------E-DSTKQVFSKVLFKSN-EHSDQLTREENTAIRTPEHLI-SQKGFSYNVVNSSAF----SGFSTASGKQVSILESSLHKVKGVLEEFDL-IRTEHSLHYSPTSRQN----VSKILP--RVDK--RNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQ-QLVLGTKVSLVE-NIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCS-TYSKDSENYFETE-AVEIAKAFMEDDELTDS------ELPSHATHSLFTCPEN-EEMVLSNSRTGKRR--------GEPLILVGEPSIKRNLLNEFDRIIENQEKS-LKASKSTPDGTIKDRRLFMHHVSLEPITCVPF--RTTKEHQEIQNPNFTAPGQEF---LSESHLYEHLTLEKSSSNL---AVSGHPFYQV--SATRNEKM---------RHLITTGRPTKVFVPPFKTKSHFH-------RVEQCV-RNINLEENRQKQ-NIDG------HGSDDSKNKINDNEIHQFNKN----------------------LITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLP-RISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLADGGWLIPSSDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKY-RYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI-----SETSSNKT---SSADTQ-KVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKVKQLKFLCSFWEVQRS--FLSLNNAFPIKKSLFYSGLENYILVLFKLLRTSSLQWLSFSCFLLIGFIYQKEQQQLGLSFLLILFLAASAQYSRVHDIYINH-EENTTKPYLPS--RALT--RQQVRALQDGAELYEAVKNAADPANLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEVRKAMESAEQKEKGLSR-DVTTVWKLRIVSYSKKEKD-SVI---LSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVISVVKKT------------GLAPFVYLSDECYNLLAIKFWIDLN----EDIIKPHMLIAASNLQWRPE----SKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVE-NIDILCNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQII-----PGTGNK--LLMSSPNCEIYYQSPLSLCMA-KRKSVSTP-------VSAQMTSKS-CKGEKEIDDQKNCKKRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPIKKKELNSPQ-MTPFKKFNEI-SLLESNSIADEELALINTQALLSGSTGEKQFISVSESTR-----------------------------------------------------------------------------------------------------","is_aligned":1},"location":"13:14169243-14261094","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSGGOP00000015446"}]},"branch_length":0.020102,"id":{"source":"EnsEMBL","accession":"ENSGGOG00000015808"},"taxonomy":{"scientific_name":"Gorilla gorilla gorilla","id":9595}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Homininae","id":207598}},{"exon_boundaries":{"boundaries":[28,121,163,191,207,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3425,3465,3496,3537,3592,3596,3606,3643,3651,3742,3798],"number_of_exons":31},"sequence":{"mol_seq":{"seq":"----MPVGSKERPTFFEIFKTRCNKA-DLGPISLHWFEELSSEAPPYNSE---PAEESEHKNNNYEPNLFKTPQRKPS-YNQLASTPIIFKEQGLTL---PL--YQ-SPVKELDKFRLDLGRN--VPNSRHKSLRTVKTKMDQADDVSCPLLSSC---LSESPVVLQCTHVTPQRD----------K-SVVCGSLFHTPK--YVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRNEEASETVFPHDT--TANVK----SYFSNHDENLKKNDRFIPSVTDSENTDQR-EATSHGFDKTLGNSF-KVNSCKDHIGK--------S-MPNVLED-EVYETVADT-S-EEVSFSLCFSKYRTRNL-QKVRTSK--TRKKIFHEANA---DEC-EK-SKNQVKE-KYSFVSEVEPNDTDPLDSNVAN---QK-PFESGSDKISKEVVPSL-ACEWSQLTLSG-LNGTQMEKIPL----LHISSCDQNISEKDLLDTENKRKKDFLTSENSLPHISSLPK-SEKPLNEETVVNKRDEEQHLESHRDCILAVKQAIS---GTSPV-------ASSFQGIKKSIFRIRESPKETFNA-SF--------SG--HMTDPNFKKETE-ASESGLEIHTVCSQKEDSLCPNSIDNGSWPATTTQTSV--ASKNAGLISTLKKKTNKFIYAIHDETSYKGKKMPKDQKSELINCSA----QFEANAFEAPLTFANADS-GLLHS----S-VKRSCSQNDSEEPTLSLTSSFGTILRKCSRNET-CSNNTVISQDLDYKEAKCNEEKLQLFITPEADSLSCLQEGQCENDPKS-KKVSDIKEEVLAAACHP-VQDS-KVEYSDT----DFQ------SQKSLLYDHENASTLILTPTSK----DVLSNLVMISRGKESY-KMSDKLKGNNYESDVEL-TK-------NIPMEKNQDICASNENDKN----VELLPPEKYIRVASPSRKVQFNQNTNLRVIQKNQ---EETTSISKIT-VNPDSEELFLDIENDFVFQVANERNNLALGNTK-ELHETDLTCVNEPIFKNSTMV--LYGDIGDKQATQVSIKKDL------VYVLAEENKNSVKQHIKMTLG-----QDLKSDV-LNI-DKIPDKNNDYMDKSA----------G---LLGPISNHSFGGGFRTASNKEIKLSEHNIKKSKMFFRDIEEQ-YPTSLACVE-------------IVNTLA-------L--DNQKKLSKP-----QSINTVSAHLPSSVVVSDCKNSHITP--------------------QMLFSKQDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSYILQKNT---FEVPE----NQMTILNTTSEECRDADLHVIMN--------APSIGQVDSSKQFEGTVG-IKQKFAGLLKNDCNKSAA-GYLTDENEV---------------GFR------------GFYSAHGA-KLNVSTEALQKAVKLFSD-------IENIGEE----T-SAEVDPISLSSSKC--HDSVVSMFKTE---NH---DKTVSEK-----NNICQLILQN--NIE-MTSGTFVEEITENYKRNTEN-E-DNK--------------------------YTAAS-RNSHNL-EFDGSDSSKN-DTVCIHKDETDLLF-TDQHNICLKLSGQFMKEGNTQ----IKEDLSDLTFL-EVVKAQETCHGNTSNKE-QLTATKTEQNIKGFETFDT--SFQTASGKNISVAKESFNKIVNFFDQKPE--ELHNF--SLNS--------ELHSDIRKNKMDILSHEETDIV--KNKILKESVPVGT-GNQLVTFQEQPERD-EKIKEPTLL-----GFHTASGKKVKIAKESLDKVKNLFD-EKEQG-TCEITSFSHQWAKTLKYRDA--RKD-LELARETIEITTAPKCKEMQNSRNND---KNLVSIET-VVPPKLLSDNLCRQTENLKTSKSIFLK-VKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLTEAKKWLRE--GIFDGQPERVNTA-------------DYVGNSLYESNSN------------TIAENDKN-HLSEKQD-TYLSNSSMSNSYS--YHSD-----EVHNDSGYLSKNKLD-SGIEPVLKDVEDQK-NTSFSKVISNVKDANAYPQTVNEDICVEELVTSSSPCENKN-----AAIKLSISNSNNFAVGP----------PAFRIASGKIICVSHETIKKVKDIFTD--SFSKV-IKENNENKSKICQKKIVAGCY-EALDDSEDI--L-HNS--LDNDECSMHSHKVFADIQSEEVLQHNQNM---SGLEKVSKISACDVSLETSDICKC--SIGKLPKSVSSTNTCGIFSTASGKSVQISDASLQKARQVFSEI-------E-DSTKQVFSKVLFKSN-EHSDQLTRQENTAIHTPENLT-SQKGFSYNVVNSSAF----SGFSTASGKQVSILEGSLHEVKGVLEEFDL-IRTEHSLHYSPTSRQN----VSKILP--CVDK--RNPEHSVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFQQDKQ-QLVLGTKVSLVE-NIHVLGKEQTSPENVKMEMGKTETFSDVPVKTNIEVCS-TYSKDSENYFETE-AVEIAKAFMEDDELTDS------ELPSHATHSLFTCPKN-EEMFLSNSRIGKRR--------GEPLISVGEPPIKRNLLNEFDRIIANQEKS-LKASKSTPDGTIKDRRLFMHHVSLEPITCVPF--CTTKERQEIQNPNFTAPGQEF---LSKSRLYEHLTLEKSSSNL---AVSGHPFYQV--SATRNEKM---------KHLITTGKPTKVFVPPFKTKSHFH-------RDEQCV-RNINLEENKQKQ-NIDG------HGSGDSKNKINDTEIHQFIKNNSNQ-AAAVIFTKCEEEP-L-DLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLP-RISLKAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKENLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKY-RYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI-----SETSSNKT---SSADTQ-KVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKLG--FFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKFQEEFEEH-EENTTKPYLPS--RALT--RQQVRALQDGAELYEAVKNAADPAYLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSR-DVTTVWKLRIVSYSKKEKD-SVI---LSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKT------------GLAPFVYLSDECYNLLAIKFWIDLN----EDIIKPHMLIAASNLQWRPE----SKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNTVE-NVDILCNEAENKLMHILHANDPKWSTPSKDCTSGPYTAQII-----PGTGNK--LLMSSPNCEIYYQSPLSFCMA-KRKSVSTP-------VSAQMTSKS-CKGEKEIDDQKNCKKRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPIKKKELNSPQ-MTPFKKFNEI-SLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPT-----------------SSKDYLRLKRRCTTSLI--KEQESSQAGTEECEKN---KQD-------------------TVTTKKYI------------","is_aligned":1},"location":"13:31850770-31940736","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSPPYP00000005997"}]},"branch_length":0.007529,"id":{"source":"EnsEMBL","accession":"ENSPPYG00000005264"},"taxonomy":{"scientific_name":"Pongo abelii","id":9601}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Hominidae","id":9604}},{"exon_boundaries":{"boundaries":[28,121,163,191,207,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MPIGSKERQTFFEIFKTRCNKA-DLGPISLNWFEELSSEAPPYNSE---PAEESEHKNNNYEPNLFKTPQRKPS-YNQLASTPIIFKEQGLTL---PL--YR-SPVNELDKFRLDLGRN--VPNSRHKSLHTVKTKMDQADDVSCPLLNSC---LSESPVVLQCTHVTPQRD----------K-SVVRGSLFHTPK--FVKGRQTPKHISESLGAEVDSDMSWSSSLATPPSLSSTVLI-VRNEEASETVFPHDT--TANVK----SYFSNHDESLKKNDRFIPSVTDSENTNQR-EATSHGFGKTLGNSF-KVNSCKDHIGK--------S-MPNVLED-ELYETVVDT-S-EEDSFSLCFPKYRTRNL-QKVRTSK--TRKKIFREANA---DEC-EK-SKNQVKE-EYSFVSEVQSNDTDPLDSNVAN---QK-TFESGSDKISKEVVPSL-ACEWSQLTLSG-LNGTQMEKIPL----LHISSCDQNISEKDLLDTENERKKDFLTSENSLPHISSLPK-SEKPLNEETVVNKRDEEKHLESHRDCILAVKQAIS---ATSPV-------ASSFQGIKKSIFRIRESPKETFNA-SF--------SD--HMTDPNFKKETE-ASESGLEIHTVGSRKEDSLCPNSIDNGSWPATTTQTSV--ASKNAGLISTLKKKTNKFIYAIHDETSYQGKKIPKDQKSELINCSA----QFEANAFEAPLTFANADS-GLLHS----S-VKRSCSQNDSEEPTLSLTSSFGTVLRKCSRNETCCSNNTIISQDLDYKEAKCNKEKLQLFITPEADSLSCLQEGQCENDPKS-KKVSDIKEEILATACHP-VQHS-KVEYSDT----DFQ------SRKSLLYDHENASILILTPTSK----DVLSNLVMISRGKESY-KMSDKVKGNNYETEVEL-TK-------NIPMEKNQDVCALNENSKN----VELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQ---EETTLISKIT-VNPDSEEHFSDNENNFVFQVANERNNLALGNTK-ELHETDLTCVNEPIFKNSTVV--LYADIGDKQATQVSTKKDL------VYDFAEENENSVKQHLKMTLG-----QDLKSDISLNI-DKIPDKNNDYMDKWA----------G---LLGPISNHNFGGSFRTASNKEIKLSERNIKKSKMFFKDIEEQ-YPTSLACVE-------------IVNTLA-------L--DNQKKLSKP-----QSINTVSAHLQSSV-VSDCKNSHINP--------------------RMLFSKQDF--------NSNHNLTPSQKAEITELSTMLEESGSQFEFTQFRK----PSYILQKNT---FEVPE----NQMTILNTTSEECRDADLHVIMN--------APSIGQVDSSKQFEGTVG-IKQKFAGLLKNDCNKSAS-GYLTDENEV---------------EFR------------GFYSAHGS-KLNVSTEALQKAVKLFSD-------IENISEE----T-SAEVDPISLSSSKC--HDSVVSMFKIE---NH--SDKTVSEK-----NNKSQLILQN--NIE-MTIGTFVEEITENYKRNTEN-E-DNK--------------------------YTVAS-RNSHNL-EFDGSDSGKN-YTVCIHKDETDLPF-TDQHNICLKLSDQFMKEGNTQ----IKEGLSDLTFL-EVVKAQETCHGNTSNKE-QLTATKTEQNIKDFETSDK--SFQTASGKNISVTKQSFNKIVNFFNQKPE--ELHNF--SLNS--------ELHSDIRKNKMDILSHEETDIV--KNKILKESVPGGT-GNQLVTFQEQPERD-EKIKEPTLL-----GFHTASGKKVKIAKESLDKVKNLFD-EKEQG-TIEITSFSHQRAKTLKYREA--CKD-LELACETIEITTAPKCKEMQNSLNDK----NLVSIET-VVPPKLLSDNLCSQTENLKTSKSIFLK-VKVHENVEKETAKSPAACYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLRE--GIFDSQPERINTA-------------DYVGNSLYENNSN-----------NTIAENDKN-HLSEKQD-TYLSNSSMSNSYS--YHSD-----EVYNDSGYISKNKLD-SGIEPVLKNVEDQK-NTSFSEVISNVKDANAYPQTVNEDICVEELVTSSSPCKNKN-----AAIKLSISNSNNFEVGP----------PAFSTASGKIICVSHETIKKVKEIFTD--SFSKV-IKENNENKSKICQTKIVAGCYDDCMDDSEDI--F-HNS--LDNDECSMHSHKVFADIQSEEILQHNQNM---SELEKVSKISPCDVSLETSDICKC--SIGKLPKSVSSTNTCGMFSTGSGKSIQVSDASLQKARQVFSEI-------E-DSTKQVFSKVLFKSN-EHSDQLTREENTAIHTPKHLISSQKGFSYNVVNSSAF----SGFSTASGRQVSISESSLRKVKGMLEEFDL-IRTEHSLHYSPTSRQN----VSKILP--CVDK--RTPEHCVNSEMEKTCSKEFKLSNNFNVEGGSSENNHSIKVSPYLSQFKQDKQ-QLVSGAKVSLVE-NIHVLGKEQASPENVKMEIGKTETFSDVPVKTNTEVYS-TYSKDPENYFETE-AVEIAKAFMEDDELTDS------ELPSHATHSLFTCPKN-EEMVLSNSRIGKRR--------GEALISVGEPPIKRNLLNEFDRIIENQEKS-LKASKSTPDGTIKDRRLFMHHVSLEPITCVPF--CTTKERQEIQNPNFTTPGQEF---LSKSHLYEHLTLEKSSSSL---AVSGHPFYQV--SAARNEKM---------RHLITTGKPAKVFVPPFKTKSHFH-------RDEQCV-RNINLEENKQKQ-NIDG------HGSGDSKNKINDNEIHQFNKNNSNQ-AAAVIFTKCEEEP-L-DVITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLP-RISLKAAVGCQVPSACSHKQLYTYGVSKHCVKINSKNAESFQFHTQDYFGKESLWTGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKY-RYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSADT-----SETSSNKT---SSADTQ-KVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLG--FFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPTQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEH-EENTTKPYLPS--RALT--RQQVRALQDGAELYEAVKNAADPAYLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSR-DVTTVWKLRIVSYSKKEKD-SVI---LSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKT------------GLAPFIYLSDECYNLLAIKFWIDLN----EDIIKPHVLIAASNLQWRPE----SKSSLPTLFAGDFSMFSASPKEGHFQETFNKMKNTVE-NIDILCNEAENKLMHILHANDPKWSTPTKDCTSEPYTAQII-----PGTGNK--LLMSSPNCEIYYQSPLSLCMA-KRKSASTP-------VSAQMTSKS-CKGEKEIDDQKKCKKKR-ALDFLSRLPLPPAVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPIKKKELNSPQ-ITPFKNFNEI-SLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTAPT-----------------SSKDYLRLKRQCTTSLI--KEQESSQAGTEECEQN---KQD-------------------TITTKKYI------------","is_aligned":1},"location":"GL397329.1:5273331-5357426","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSNLEP00000001277"}]},"branch_length":0.011073,"id":{"source":"EnsEMBL","accession":"ENSNLEG00000001048"},"taxonomy":{"scientific_name":"Nomascus leucogenys","id":61853}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Hominoidea","id":314295}},{"exon_boundaries":{"boundaries":[28,121,163,191,207,247,270,309,743,1251,2766,2799,2825,3003,3065,3128,3187,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":27},"sequence":{"mol_seq":{"seq":"----MSIGSKERPTFFEIFKTRCNKA-DLGPISLNWFEELSSEAAPYNSE---PAEDSEHKNNNYEPNLFKTPQRKPS-YNQLASTPIIFKDQGLTL---PL--YQ-SPVKELDTFRLDLGRN--VPSSKHKSLRTVKAEMHQADDVTCPLLNSC---LSESPVVLQCTHVTPQRD----------K-SVVCGSLFHTPK--FVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRNEEASETLFPHDT--TANVK----SYFSNHDKSLKKNDRCIPSVTDSENTNQR-EATSHRFGRTLGNSF-KVNSCKDHIGK--------S-MPNVLED-EVYETVVDT-S-EEDSFSLCFSKCRTGNL-QKVRTSK--TRKKIFHEANA---DEC-EK-SKNQVKE-KYSFVSEMESSDTDPLDSNVAN---QK-PFESGSDKISKEVVPSL-ACEWSQLTLSG-LNGTQMEKIPL----LHISSCDQNNSEKDLLNTENERKKDFLTSENSLPHISSLPK-SEKPLNEETVVNKRDEEQHLESHRDYILAVKQAVS---ETSPM-------ASSFQGIKKSIFRIRESPKETFSA-SF--------SG--HVTDPNFKKETE-ASESGLEIHTVCSRKDDSLCPNSIDNGSWPAATTQTSV--ASKNAGLISTLKKKTNKFIYAIRDETSYQGKKIPKDQKSELMNCSA----QFEANAFEAPLTFANADS-GLFHS----S-VKRSCSQNYSEEPTLSLTSSFGTILRKCSRNETCSSNNTIISQDLDYKEAKCNKEKLQLFITPEAHSLSFPQEGQYENDPKS-RKVSDIKEEVLAAAHHP-VQHS-KAEYSDT----DFQ------SQKSPLYDHENASTLILTPTSK----DVLSNLVKISRGKESY-KMSDELKGNNYESDFEL-TK-------NIPMEKNQDVCALSENSKH----VELLPPEKYIRVASPSRKVQFNQNTNLRVIQKDQ---EETTLIPKIT-VNPDSEELFSDNENNFVFQVANERNNFALGNTK-ELHETDLTCVNEPIFKNSTMV--LYADIGDKQATQVSIKKDLDSS-NTVYDLAEENKNSVKQHLKMT------------------------------------------------------------------------------------------------------------------------------L--DNQKKLSKP-----QSINTVSAHLQSSVVVSDCKNSHITP--------------------QMSFSKQDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSYILQKNT---FEVPE----NQVTILNTTSEENIEAGL-VIMN--------APSIGQVDSSKQFEGTVG-IKQKFAGLLKNDCNKSAS-GYLTDENEV---------------EFR------------GFYSAHGV-KLNVSTEALQKAVKLFSD-------IENISEE----T-SAEVDPISLSSSKF--HDSVVSMFKIE---NH--NDKTVSGK------NKCQLILQN--NIE-MTTGTFVEEITENYKINTEN-E-DNK--------------------------YTAAS-RNSRNL-EFVGSDSSKN-DTVCIHKDEKDLPF-TDQHNICLKLSGQFMKEGNTQ----IKEGLSDLTFL-EVVKAQETCHGNTSNKE-QLTATKTEQNIKDFETFDI--SFQTASGKNISVTKESFNKIVNFFDPKPE--ELHNF--SLNS--------KLHSDIRKNKMDILSHEETDTV--KNKILKESVPVGT-GNQLVTFQERPQGD-EKIKEPTLL-----GFHTASGKKVKITKESLDKVKNLFD-EKEQG-TSEITSFSHQWAKTLKYREA--CKD-LELACETVEITTAPKCKEMQNSLNND---KNLVSIET-VVPPKLLSDHLCRQTENLKTSKSIFLK-VKVHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKRSVSQTSLLEAKQWLRE--GIFDDQPERINTA-------------DYVGNSLYENNSK-----------NTIAESDKN-HPSEKQD-TTLNNSSMSNSCS--YLSD-----EVYSDSGYLSKNKLD-SGIEPVLKKVEDQK-NTSFSKVISSVKDANTYPQTVNEGICVEELVTSSSPCKNKN-----AAIKLSISNCNNFEVGP----------PAFSTASGKIICVSHETIKKVKEIFTD--SFGKV-IKENNENKSNICQTKIVAGCY-EALDDSEDI--F-HNS--LDSDECSMHSHKVFADIQSEEILQHNQNM---SGLEQVSKMSPFDVSLETSDICKC--SIGKLPKSVPSTNTCGIFSTASGKSVQVSDASLQKARQVFSEI-------E-DSTKQVFSKVLFKSN-EHSDQLTREENTTIHTPKHLISSQKDFSHNVVNSSAF----SGFSTASGKQVSISESSLHKVKGMLEEFDI-IRTEHSLHYSPTSRQN----VSKILP--CVDK--RTPEHCVNSEMEKACSKEFNLSNNFNVEGGSSENNHSIKVSPSLSQFKQDKQ-QLVLGTKVSLVE-NIHVLGKEQASPENVKMEIGKTEAFSDVPVKTNIEVCS-TYSKDSENYFETE-AVEIAKAFMEDGELTDS------ELPSHATHSLFTCPQN-EEMVLSNSRIGKRR--------GEALISAGEPPIKRNLLNEFDRIIENQEKS-LKPSKSTPDGTIKDRRLFMHHVSLEPITCVPF--CTTKERQEIQNPNFTAPGQEF---LSKSHLYEHLTLEKSSSNL---AVSGHPFYQV--SATRNEKM---------RHLITTGKPTKVFIPPFKTKSHFH-------RDEQCV-RNINLEENKQKQ-NIDG------HGSGDSKNKINDNEIHQFNKNNSNQ-AATVIFTKCEEEP-L-DLITSLQNARDIQDMRIKKKQRQRIFPQPGSLYLAKTSTLP-RISLKAAVGGQVPSACSHKQLYMYGVSKHCIKINSKNAESFQFYTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKEFANRCLSPERVLLQLKY--YDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI-----SETSSNKT---SSADTQ-KVAIIELTDGWYAIKAQLDPPLLAILKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLG--FFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEH-EENTTKPYLPS--RALT--RQQVRALQDGAELYEAVKNAADPAYLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSR-DVTTVWKLRIVSYSKKEKD-SVI---LSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERANIQLAVTKKTQYQQLPVSDEILFQVYQPREPLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKT------------GLAPFIYLSDECYNLLAIKFWIDLN----EDIIKPHMLIAASNLQWRPE----SKSGLPTLFAGDFSVFSASPKEGHFQETFNKMKNIVE-NIDILCNEAENKLMHILHANDPKWSTPIKDWTSESYTAQII-----PSTGNK--LLISSPNCELYYQSPLSLCMA-KRKSVSTP-------ISAQITSKS-CKGEKEIDDQKNCKRRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----N-ETPIKKKELNSPQ-MTPFKKFNEI-SLLESNSIADEELALINTQALLSGSTGEKQFISVSESTRTTPT-----------------SSKDYLRLKRRCTTSLI--KEQESSHSDKEECENN---KQD-------------------TITTKKYE------------","is_aligned":1},"location":"17:11687584-11777925","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSMMUP00000009432"}]},"branch_length":0.014479,"id":{"source":"EnsEMBL","accession":"ENSMMUG00000007197"},"taxonomy":{"scientific_name":"Macaca mulatta","id":9544}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Catarrhini","id":9526}},{"exon_boundaries":{"boundaries":[27,121,164,191,207,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MPIGSKERPTFFEIFKTRCNKAVDIGPISLNWFEELSSEASPCNSE---PTEESEHKISVYEPNIFKTPQRKPS-YNQLASTPIIFKEQGLTL---PP--YQ-SPVKELDKFRLDLGRK--VPNGRHKSPRTVKAKMDQTDDVTCPLLNSC---LSESP-VLQCTHVTPQRD----------K-SVVCGSLFHTPK--FVKGHQTPKHISESLGAEVDPDMSWSSSLATPPSLSSTVLI-VRNEEASETVFPHDT--TAIVK----CCFSNHDESLKKNSRFIPSVTDSENTNQR-EATCHGFGKTLGNSFGKVNSCKDYIGK--------S-MPNVLED-EVYETIVDT-S-EEDSFSLCFSKCRKRNL-QKVRTEK--TRKKIY-EANT---DEC-EK-SKSQVKE-KYSFVSELEPNDTDPLDSNVAN---QK-LFESASDKISKEVVPSL-AYERSQLTLSG-LHGTQMEIIPL----LHISSCDQSNSEKNLLDAENERKKDFLTSENSLSDISSLPK-SEKPLNEERMVNKKDEEQHLESDGDHILAVKQATS---GNPLV-------ASSFQGIKKSIFRIRESPKETLSA-SF--------SG--SMSDPNVKKETE-ASESRLEIHTVCSWKEDTLCPDSIDNGSWPASITQTSV--VLKNAGLISTLKKKTNKFIYAIHDETSYQGKKIQKDQKSEVINSSS----QFEANAFEAPLTFANTDS-GLLHP----S-VQRNCSQIDSGEPTLSLTSSSGTILRKCTRNET-CCNNIIISQDLDYKEAKCNKEKTQLFITPEADSLSCLQEGQCKNYPKS-KEVSDIKEEVLATACHL-AQHS-EVEYCDT----DFQ------SQKTILHDHENASSLILTPAFK----DVLS-------GKESY-RISDELKCNNCEADFEL-IK-------NISMENNQDVHALNENSKN----IELLPPEKYIIVASPSRYVQFNQNTNLRVIQKDQ---EETTLISKMT-VSPDSEELLSDNENNFVFQVASERNNFALESTE-ELHEADLTCVNKPNFENSTMV--LHADIVDKQATQVSIKKDLDSS-NKVYYLAEEKKNSVKQHLEMTLG-----QDIKSDISLNI-DKIPNKNNDYKDKWA----------G---LLHPISNHSFGGSFRTASNKEIKLSEHNIKKSKMLFRDIEEQ-YPTSSACVE-------------IVNTLA-------L--DNQKKLSKP-----QSIKTVSAHVQSSVVGFDCKNSLTTP--------------------QMLFSKEDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQYRK----PSYILQNNM---FEVPE----NQMTILNSTSEEYRDADLHLVMN--------APSIGQVDSRKQFEGTVG-IKQKFAVLLKNDCNKSAS-GYLTDADEV---------------ELR------------GFYSAHGV-KLNVSTEALQKAVKLFSD-------IESISEE----T-SAAVDPISLSSSKC--HDSVVSVFKIE---NH--D-----EK-----NNECQLILQN--NIE-MTTGTFVEEITENYKKNIEN-E-D-K--------------------------HTATS-RNTHNL-EFDGSDSSKN-DTVHIHKDENDLPL-TNQHNIYLKLSGQFMKEGNTQ----IKEDLSDLTFL-EVVKAQETCHGNTSNKE-QLTATKMEQNIKDVGTFDL--SFQTASGKNISISKESFNKVVNFFDQKPE--ELHNF--SLNS--------KLHSDIRKNKMDILSYEETDIV--KNKTLKESIPVGT-GNQLVTIQEQPKSNIKKIKEPTLL-----GFHTASGKKVKIAKESLDKVKNLFD-EKGQD-TGEITSFSHQGAKTLKYREA--YKD-LELVRETVEIATTRKHEEMQNSLSND---KNLVSIET-VVPPKPLSDNLYRHTESLKTSEGNFLK-VKEHENVEKETAESPATCYRNQSPYSVIENSALAFYTYCSRKTSVSQASSLEAKQWLRE--GEFDDQPENINTV-------------DFVGNSLYENNSN-----------NTITEGNKN-HLSEKQD-TYLSNSSMSNSYS--YHSD-----EVYNDSGYRSKNNLD-SGIEPVVKNVEDQK-NTRSSKVTFNVKDANAYPQTVNEDTCVEELVTSSSSCKNKN-----AAIRLSTSNCNNSEVGP----------HAFSTASGKIVCVSHETIKKVKEKFTD--SCSKV-IKENTENKSNNCQTKILAGCY-KALNESEDI--F-HNS--SGNDECSMHSHKVFADIQSEEILQHNQKM---FGVEKVSEIPPCDVSLETSGIYKF--SMGKLPKSVLSTNTCGIFSTASGKSVQVSNASLQKARQVFSEI-------D-DSTKQLSSEVLFTNN-EHSDQLTREENTATQIAEHLIPSQKGFSYN-VNSSAF----SGFNTASGKQVSISESALHKVKGMLEEFDL-IRTEHSLHHSPISRQN----VSKILP--CVVK--RNPEHCVNSEMEKTCSKEFKLSNNFNIEGGSSEHNQSIKVSPYLSQLKQDKQ-QLVLGTKVSLVE-NIDVLGKEQASLENIKMEIGKTETFSDVSVKTNTEVCS-TYSKDSENCFETE-AVEIAKAFMEDDELIDS------ELPSHASHTLITCPKN-DEMVLSNSRIGKRR--------GEAIISVGEPPIKRSLLNEFDRIIENQEKS-LKASKSTPDGTIKDRRLFTHHVSLEPITCVPF--CTTKERQKIQNLNFTAPGQES---LSKSHLYEHLTLEKSSSSL---AVSGQPFYQV--PATRHEKM---------RRLIATGKPTKVFVPPFKTKSHLH-------RDEQCV-RNINLEENKPKQ-NIDG------HGSGGGKNKINDSEIHQLNKNNSNQ-AATVIFTKREEEP-L-DLITSLQNARDIQDMRIKKKQRQCIFPQPGSLYLTKTSTLP-RISLKAAVGSQFPSACSHKQLYMYGVSKHYVKINSKNAESFQFHTQDYFGKESLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-RYDMEIDKSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI-----SETSSNKT---SSADTQ-NVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELVGSPDACTPLEAPESLMLKISANSTRPARWYTKLG--FFPDPRPFPLPLSSLFSDGGNVGCVDVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKHAEAQQKRLEALFTKIQEEFEEH-EENKTKPYLPS--RALT--RQQVHALQDGAELYEAVKNAADPAYIE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEIRKAMESAEQKEQGLSR-NVTTVWKLRIVSYSKKAKD-SVI---LSIWRPSSDLYSLLTEGMRYRIYHLATSKSKSKSERANIQLVATKKTQYQQLPASDEILFQVYQPRESLHFSKFLDPDFQPSCSEVDLIGFVVSVVKKT------------GLAPLVYLSDECHNLLAIKFWIDLN----EDIIKPHMLIAASNLQWRPE----SKSGLPTLFAGDFSVFSASPKQGHFQETFNNLKNTVE-NIDIFCNEAENKLMHILQANDPKWSTPTKDYNSEPHTAQII-----LPAGNK--LLMSSPNCDINYQSPLSLRMP-KSKSVSTP-------VPAQMTSKS-CKGEKEIDDQKSCKKRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPIKKKELNSPQ-VTPFKKFNEI-SLLESNSIADEELALINTQALLSGSIGEKQFISVSEFTRTAPT-----------------SSKDCLRLKRCSTTSLI--KEQESSRAGTEECEND---MQD-------------------TSTTEK--------------","is_aligned":1},"location":"5:145430371-145527428","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSCJAP00000034250"}]},"branch_length":0.034899,"id":{"source":"EnsEMBL","accession":"ENSCJAG00000018462"},"taxonomy":{"scientific_name":"Callithrix jacchus","id":9483}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Simiiformes","id":314293}},{"exon_boundaries":{"boundaries":[19,28,121,163,191,207,234,247,270,309,660,715,735,749,788,789,879,1203,1209,1248,1252,2102,2252,2768,2801,2827,3005,3067,3130,3188,3202,3209,3215,3219,3231,3247,3302,3311,3317,3371,3423,3468,3540,3595,3654,3745,3801,3917,3424],"number_of_exons":50},"sequence":{"mol_seq":{"seq":"----MPIGSKERPTFFEIFKTRCNKA-DLGPISLNWFEELSSEAPLYNSE---PTEEPEYKISSYEPNLFKTPQRKPS-FHQLASTPIIFKEQGLTL---PL--YQ-SPVKELSKYSLELGRN--IANSKHKSHHTVKIKRDEADDVTSPLLNSC---LRESSDVLQCTHVSSQKD-----------KSVVCGSLFHTPKF--VKXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPTLSSTVLI-XXXXXXXXXXXXXXXX--XXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXLGKMLGNSFGKVNSCKDHFGE--------S-MPSVLED-EVHETVVDT-S-EEDSFLLCFPKCRTGNL-QKNRTEK--TRKTNLYEAKT---EECE-E-VKKQMEE-QHLLGSEMELNVSDPLDSVIAD---QKP-FGNGSGRISKEFVPSS-ACEWSQLTLSG-LNGTQVEKIPL----LC-SSCDQNNSEKDLIHTEKEC-IDFITSENSLPHISSLPQ-SEKKLSKETVVNKRDEEQHIETHEDSILAVKRAGS---GTSPT-------AFPYQGIKKSIFRIRESPEETFST-IF--------SG--NMSNRCFKEGT-EASESELEIHSVCSQKEDSLCTCPVDNGIWPTTIIHSCV--TSKNTGLISTLKKKTNKFIYAISGEASYQ-KKIQKDQKSD-TDRSS----QLAASTFNASLXXXXXXX-XLLHS-----SVKRNSLQNDSEEPTLSLTNSFGTISRKCPNKET-SSNNTVISQDLDYKEAKINKEKLHSFIIPEPDYLLCFQEGKCENNPKS-RKIFDTKEKNLAATGHPAVQHA-KVDCSGI-----FR------SQESLLYDHDSASTLILTPTSK----NSSSNLVVISKGKES-FKMSDKLQCKNCETDFEL-TK-------NIPMEKNQEIPALSEHSKN----VELLPPRKHLT-------VQVNQNTNLTITQKEQ----QTTLISKIT-VNSNSEELFSDNENNFVFQVTNERGNPVLENTK-ELHEVDLSCVKEPILENSTMV--AFAGINDKQTAQVSIKKDLDSS-DIDYGFIE-DRNSVKQHLKLTRG-----QDLESEISLDI-NKISNKNNDYMDKWA----------E---LLDPISNHSFGGSFRTASNKEIKLSECNI-KSKILF-DIEEQ-YPTSLACVE-------------IV-IVE-------L--DSQKKLSKTHAFVSQSVNTVSVHAQSSTIVSDCKNGHPTP--------------------QMLFLKGDF--------NSNHNLTPSQKAEITELSSILEESGSQFEFTQFRK----PSHIILNNT---FEALE----NQMTDLNTTSEKWKDVDLHRTIN--------APSISQVHSSRKFEGAVG-VKQKFACLLENNCNKSA-SGYSTDENEV---------------EFR------------GFYSARGK-KLNVSNEALQKAVELFSD-------IENINEK-----TFTEVDPRSSSSGKY--HDSIVSMFKIE---NH-NNDRNFDEK-----NNKCQLTSPN--NTE-VTTGTSIKENIENYKRNTEN-E-NNK--------------------------HTASDRRNTCNSGESNVSDSSRN-ETVYIHKDENDLPC-TDQHNISLKLSSHFMKKGNIQ----IKEHLSDLTCL-EVVKAEETCQVNTSNK-EQLTTCKMEQNIKDFETFDI--SFHTASGKKIRVFKESLNRVVSFFDEKPEE-ELNNF--SLNS--------KLLSGIKKNKVDILSHEETDLA--KNKILKESIPVGT-GNQFGTLQQQPDCDLGKVKEATLW-----SFHTASGRKVKITKESLYKVKNLFD-EKQD--ISEIISFSHQEAKTLNDRQD--CKEELKLACETSEVTTVPKCEEIQNSLDDG---RNLVSNET-AVLPRLLSDNLRRQSENLKASNSKSLK-VKVHENVEKETARSPTPCYTDQSPYSAIENSALGFHTGHGRKISVSQASLLKAKKWLRE--GELDDQPEKINTA-------------GYIENPPCENNLS-----------SSMTENDKN-HLSEKQNSTYLSNSSLSNSNSY--LSDFCYSEEIYNDSGYLSKNKMD-SGFELVVKNVEAKR-NSSCPEVMSTMREANMNPKTVNEDTCVQNLVTNSLPCKNKN-----ATIKESXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-X-XXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX----XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXX-XXXXXXXXXXXXXX--------XXXXXXXXEPPIKRNLLNEFDRIIENQEKS-LQASKSTPDGTIKDRRLFMHHISLEAVTCGPS--CTTNKRQEKQNPNFTAPGQEF---LSKSHFYEHRTLEKSSSNV---SVSGQPFFKVP--GTRNEKM---------APSITAGKLTKVFVPPFKTKSHFH-------RDEE----GTNLEEN-KQKQDIDK------YGSGDSDNNINDSEIHPSNTNNSNQ-AANVIFTKCEEEP-L-DLTTSLQTARDIQDMRIKKKQRQRVFPLPGSLYLAKTSTLP-RISLKAAVGGQVPSACSHNQLYMYGISKHCVKINSKNAESFRFHTQDYFGKESLWTGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKY-RYDMEIDRSRRSA-KKIMERDDTAKT--LLCVSDVIS-SINV-----SETSDSKX---XXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTPLEAPESLMLKISANSTRPXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XNTTKRHIPS--RALT--RQQVRALQDGAELYEAVKNAPDPGYLE--GYFSEEQLRALNNHMQMLNDKKQAQIQSEFRKAVESAEQGERSLS-RDVTAVWKLRIASYANREKD-SVI---LSVWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKSERAGIQLAATKKTQYQQLPASDELLFHVYQPREPLHFSRLLDPDFQPPCSEVDLIGFVVSIVKKT------------GLAPLVYLSDECQNLLAVKFWTDLN----EDIIKPHMLIAASNLQWRPE----SKSRIPTLFAGDFSVLSASPKESHFQDTFNKMKNTIE-NIDIFCSEAENKLMHMLNVNDPRWSTPIKGCTSELHTAQTV-----LVTGNK--LLMSSPNNEINHQNLLSLSTP-KGKFVSIP-V------SVQMTSKSCCKGEKEVDDQKNCKKRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCD-SK----Y-EIPLKK-ALSSPQ-MTPLKKFNKL-SLLESNSIADEELALINTQALLSGSTGGNQLVSISEASRTAPT-----------------NAKDDLGLKRHCVASLI--KEQNDSQAGTEERESN---GQD-------------------TRTEKHI-------------","is_aligned":1},"location":"GeneScaffold_7779:11488-76077","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSTSYP00000000441"}]},"branch_length":0.069523,"id":{"source":"EnsEMBL","accession":"ENSTSYG00000000478"},"taxonomy":{"scientific_name":"Tarsius syrichta","id":9478}}],"confidence":{"value":73,"type":"boostrap"},"taxonomy":{"scientific_name":"Haplorrhini","id":376913}},{"events":{"type":"speciation"},"branch_length":0.018454,"children":[{"exon_boundaries":{"boundaries":[121,163,191,208,247,258,270,309,568,755,2103,2474,2480,2484,2488,2501,2513,2698,2726,2770,2803,2829,3007,3069,3132,3190,3318,3372,3424,3468,3469,3541,3596,3655,3746,3765],"number_of_exons":37},"sequence":{"mol_seq":{"seq":"----------------------------LGPISLNWFDELSSEAPPYNSE---PAEESEYKISSYEPHLFKTPQRKPS-YRQLASTPIIFKEQGPTL---SL--YQ-SPVKELDKCRLDLGNN--VANSKHKSRHTVKAKMDQADAVTSPLLNSC---LSEXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXX--XX-GQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRGEDASEIV-PNDTX--XXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXLGKMLGNSFDKANSCKDHFGK--------S-IPNALED-EVHEAVADI-S-EEDSFSLCYSKYRTENL-KKVRTGK--TRKKVFHETKT---GEYE-E-PKKQLKE-KHSFASEMKPKDSDPLDSNVAK---QKP-FGNGSDKISKEVLESS-ACEWSQLTLSDNLSRTQMEKIPL----LHISSCDQNNSEKDLVDSEKEY-TNFITSENSLPHISSLPK-PEKMLNVETVVNKGD-----ESHEDSILVVKQ-IS---RIPSI-------ASPFQGIKKSIFRIRESPEKTFSA-VF--------SG--NMTDPNLKEKS-GTSESQLELYAICSQKEDSLCPSSIDK-SWQATITDTSV--PLKNAGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNYSA----QFEANVFQAPRTFTNVDS------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXX-XXXXXXX----XXX------XXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXX-XX-------XXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXX-XXKKANKNDYMDEWV----------G---PLYPVSNHTFGGSFRTASNKEIKFSEHNIKKSKLLFKDIEEQ-YPTSLNCVE-------------IINTLA-------L--DNQKKLSKGHEFVSQSVNTVSACAQSSPFVSNCENSDIPP--------------------QML----DF--------NSNNNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSHIIPNNT---FEVPA----NKMTVLNTT-EEWKDVDLNVTIN--------ASSIGQVDNSKKFEGVVG-VKQKFTYLLENNCNKSV-SGYLTGENEV---------------EFR------------GFYSALGK-KLNVSSEAMQKAVKVFSD-------IENINEE-----PSIEVDPRSFSSSNY--NDSVVSMFKIE---NH-NNDKNLNEK------NKCQLILQN--NIE-MTTGTFVEENIENYKRNTES-E-NNK--------------------------CTATS-RNTCNI-ESDGHDSNKN-DIVYIHEDANDLPG-TDQHN--LKLSSQFMKEGNTE----IKENLSDLTCL-EIVKAGEACHVDTSHK--QLTASKIEQNIKDLGIFDI--SFQTASGKNISISKESLNK-VNFFDQKTEE-ELNNF--SLNS--------KLLSGISKNEVDILRNKETDMF--ENKILKESIPVGT-GIQLATLQQQPECEIEKIKEAMLL-----SFHTASGKKVNIAKESLEKVKNLFD-EKKQY-IDEITSFS-QGLKIQKDRGD--CKEGLILACETVEITTVPKCEEMQNSLDDN--EKNQVSN---TVLPGPFSDHLHRQSENLKTSNDISLK-VKVHENVEKETAKSPTICYTNQSPYSAIENSALAFYTGHGRRISVSEASLFEAKKWLRE--GELGDQLEKINTA-------------NYGGNPSQESASN-----------SIITENDKN-HLSEEQDSTYLGNSNLSNNYSC--HSNSCYSHEVYNDSGYLSKNIID-SGIEPVVKNIEDKE-NSSFSEIISIVKEANAYPQTVHEDTCVQTLVTNSSLCKDEN-----TSTKLSVSNSNNFEVGP----------PAFSTASGKIVCVSHETIKKVKELFTD--NGSKV-IQPNTESKSGACQTKIGAGHY-KALNDSEDII-F-SNSDKVVDEECCMHSHKVFADIQSEQLL-HDQSM---SGLEKVSKKAPCNSSLKTSSICKF--NTGELPKSVSSTNACGIFSTASGKSIQVSDASLQKARQVFSEI--------DDSAKQLFSKISFKSN-KYLDQFREKNMHIPLISPKGF----------SYNXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX----XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXE-AVEIAKAFMEDGELTDS------E-PSHAEHSLFTCQKN-EETVCLNSRSGKRR--------GDDLVSSXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXTLKDRRLFMHHISLEPVTCGPF--GTTKERQEIQSPNFTAPGQEF---LSKSHFHERLALEKSSSIL---SISRQPFYKVP--ATRNEEM---------KRPVTTGKPTKIFVPPFKTKSHFH-------RDEQCVSKNINLEEN-KQKQNIDK------HGSGDSENNINDSEIHQLNKNNSNQ-AATVNVTKREEEP-L-DLITGLKNARDIQDMRIKKKQKQHIFPQPGSLYLAKTSTLP-RISLKAAVGGQVPSACSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLTSRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXX---XXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLEAPESLMLKISANSTRPTCWYTKLG--FFPDPRPFPLPLSSLFSDGGNVGCADVIIQRAYPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XNTTKQYIPS--RALT--RQQVHALQDGAELYEAVKNASDPGYLE--GYFSEEQLRALSNHRQMLNDKKQAQIQSEFRKAMESAEQDKQGLS-RDVTTVWKLRVVSYAKKEKD-SVI---LSVWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSKKANIQLAATKKTQYQQLPASDEILFQVYQPREPLHFNRLLDPDFQPPCSEVDLIGFIVSVVKKT------------GLAPLVYLSDECHNLLAIRFWIDVN----EDIIKPHVLIAASNLQWRPE----SKSGIPTLFAGDFSVFSASPKESHFQETFNKMKNTVK-NIDIFCNDAENKLMHML-SNNPKWSTPTKDYTSEPYTAQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"GeneScaffold_1468:1090539-1158098","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSMICP00000010933"}]},"branch_length":0.039818,"id":{"source":"EnsEMBL","accession":"ENSMICG00000011994"},"taxonomy":{"scientific_name":"Microcebus murinus","id":30608}},{"exon_boundaries":{"boundaries":[28,121,164,191,208,247,270,309,743,2101,2767,2800,2826,3004,3066,3129,3187,3315,3369,3419,3426,3443,3453,3538,3593,3650,3743,3799],"number_of_exons":29},"sequence":{"mol_seq":{"seq":"----MSVGSKERPTFFEIFKTRCNEA-DLGPISLNWFEELSSEATPFSSE---PVEESEYKIISYESHVFKTPQRKPF-YRQLASTPLIFKEQGPTL---PL--FQ-SPVKELDKCKLDLGNN--IANSKHKSHHTGNAKMDQAGDVTSPLLSSR---LSESP-VLQYTHVTPQRE----------K-SVVCGSLFHTPK--FVK-GQTQKHISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRSEDASEIVFPNDT--TAILK----SYFSNRDESLKENDRLISSVTDHENKNER-EARSCGLGKILGNSFDEVNSCKEYFGK--------S-VPNILED-KVRKAIADT-S-EEDSFSLCF-KYKTRNL-RKVRKDN--TRKKVFHETKT---GEY-EE-AKKQIKE-KHSIISEMEPNDSDLLDSNEAK---QK-PFGNESDKISKEIVESC-ASEWSHLTLSG-LSGTQMEKISP----LHI-SCNQNNSEKDLVDTEKEC-TDFITSENSLPCISNIPK-PEKILNEKTVVNKGGEPQHLESYEDSILAVKPAIS---GIPRT-------ASLFQDINKPIFKIRESSEETSSA-VF--------MG--SMTDPNVKEETE-TSESNLEIYTICSQKEDSLCPSSIDDESRLATIAHTSV--PLKNTGLISTLKKKTKKFIYAINDETSYQGKKIQKDQKSEITNCSA----QFESNVFQAPLSFTNDNS-GLLNS----S-VKRNCLQNDSEEPALSLTSSCGTLLRKCCHNKSNSPNNPVISQDFDYKEAKINEEKLQPFITSEMDYLSCQQERQCENDPKS-ENVSAIKEKVLATACYPVVHHS-EVECSGM----HIQ------SQKSLLYNHDNTS--TLTLSSK----DPWSESVVISSKKESY-KMSEKERRKSCKVGFEL-TK-------NIFAEKNQEVCSLNENSKN----AEPLLPENYIT-ASPSVKVQFNQNKNLSMIQK-----EETTLISKIL-DNPNSEELFQDNE-NFVCQVTNGRNNLILGNSK-ELPEADLSCVKEPFLENSTMV--VHADVGDRQAVQVLITKELDSS-DTVYDFPEENRNSVKQHLKVTLD-----QDLKPDTSLVI-DKKSNKN-DCMDKQA----------G---LLNPISNHNFGGGFRTASNKEIKFSEHNIKKSKMLFKDIEEQ-YPASLICVE-------------SINALE-------L--RNQKKLSKPHMLVSESINTVSSYVQSSPFVSNSENNQTPP--------------------QMLFSKQNF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PNLIMQSNT---FDVPA----NQMSLLNTTSEERKDVDL----N--------VSSVGQVETSKKFEGAVQ-VKQKFTCLSENNCNKSAS-GYLTCENEV---------------EFR------------GFYSARGK-KLNVSSEALQKAVKLFGD-------IENISEE----T-STEVDPRSFSSSKC--NDSIVSAFKIE---SH--NNTNLNEK-----NNKCQLVLQN---IE-MTTDAFVDKSTENCKRNIIE-N-DNK--------------------------CVAAN-RKTCNLGESDSSDSGKN-DTIYIHKDANDLPC-TDQHNVYFKLPSQFVKEGNTQ----MKASLSDLTCL-EIVKEEETCYVDTSNKE-QLNASHMDQNRKDFEVFDI--SFQTASGKNIKVSKESLNKVVNFFDPKTEE-ELNNF--FLNS--------KLLSGISKNKVDILSHEEIDMF--KNEILKESISIDT-QNQLSTLQQQPECENKKIKQATLL-----SFHTASGKKVKVAKESLEKVRNLFD-EEKQA-ISKIS-LNSQRAKIQKDRGERTCKEGLVLACKTVEITTVPKCEEM-NSLGDN--VENHVSNPT-AVLPKPLSDHFYRQSENISTPN-VSLK-VKVCENVEKETAKSPATCYTNQSPYSAVENSALAFYTGHGRKISVSQASLFKAKKWLRE---ELGDQPEEINSD------------KNYVGNPSHGSGSN-----------SIITENGKN-HLPEKQDSAYLSFSSMSN-YS--YHSDF----YCSHDSGYLSKNTTD-SSIEPVVKNIEDER-NINFSEVTSTVREANAYPQTVHKDTCIQKLVTNSSLCTNEN-----TAFKLSVSNSDNFEVET----------PAFSTASGKIVHVSRETIKKVKEIFTD--NCSKV-IQMDTKSKSSTCQTRIVSDYY-KTLDDSED-S-L-PNS--TD-EESSMHSHKIFADIQNVHILR-DQSM---LGLDKVSTLSPCDVSLKTSSLC----NTGKFPELVSSTNP-EIFSTASGKSIQVSESSLQQARQVFSEI-------E-EHAKQHFSKVSFKNNEEYSDQFTREEK-VIHVPQKLI-SQKGFSCNVVNSPAF----SGFSTASGKQVSVSESALHKVKGMLEEFDL-IKTDCTLQHPPTSRPG----ISKFPSLPCVDK--RTAEYSMNSEMKKAYSTEFKLLNNFNIESNTSENNHSIKVPPYMSQFKQDKQ-QLVLGTKVSLVE-NIHILGKEQALPKNIKMGIGKTETFPDVPMKTNIEVSS-TYYKDSENYFETE-AVEIAKAFMEDGELTDS------EPLSHAEHTRFTCQEN-EETVWLNSRIGKRR--------GDNHVSFGEPSIKRNLLNEFDRILENQEKS-LKVSKSTPDGTMKDRRLFMQHVYLEPITCGPF--CTTKKRQGIQNPNFTAPGQEF---LSKSHFYEHLTSENSSSNL---SVLGQPFYKV--PATRSKEM---------RHSISTGKSTKIFVPPFKTKSHFH-------RDKQCA-SNTVVEEN-KQKQNTDE------HDSGDSEN--NNSEIHQLNKNNSNQ--------ACEEEP-L-DLITSLQNARDTQDMRIKKKQRHHISPQPGSLYLAKTSSLP-RISLKAAVGGRVPSACSHKQLYMYGVSKHCIKINSKNAESFQFHIQDYFGKEYLWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-RYDLEIDRSRRSALKKIMEKDDTAAKTLVLCVSDIISLSANI-----CETSNSKT---NSEDTK-KVSVIELTDGWYAVKALLDPPLLALLKNGRLSVGQKIIIHGAELLGSPEACTPLEAPQSLMLKISANSTRPARWYTKLG--FFPDPRPFPLRLSSLFSDGGNVGCADIIIQRTYPIQWMEKTSSGLYIFRNEREEEKEAAKYAEAQQKRLEALFTKIQAEFEER-EDNNNNNFLPF--SNVATWTVPVRRYRDVCFLFQYVK------WSQ--CYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESAEQGEQGLSR-DVTTVWKLRIISCAKEETD-SVT---LSIWCPSTELYSLLTEGKRYRIYHLAASKSKIKSEKANIQLAATKKTQYQELPASDEILFQVYQPREPLHFNRLLDPDFQPPCCEVDLIGVVVSVVKKTVL----------GLAPLVYLSDECHNLLAIKFWIDLN----EDIIKLHALIAASNLLWRPE----SKSGIPTLFAGDFSMFSASPKESHFQETFNKMRNTIE-NIDIFCKDAENKLIHMLNASDPKWCTPTKDSTSELHTAQTV-----LGTGNK--FLISSPNSEINYQSPSSLCTP-KVKLVSTP-------ISAQMTSKSCCKGEKAIDDPKSCKKRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSIV-TK----Y-ETPIKKKELNSPQ-MPSPKKFIEI-SPLESNLIADEELALINTQALLSSSAGEDQCVSISEPPGTTTT-----------------NSKDYLRLKRHCTTSLN--KEPKNPQVSTEDCATN---MQD-------------------TSIIKDIS------------","is_aligned":1},"location":"GL873639.1:315573-415772","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSOGAP00000009477"}]},"branch_length":0.071541,"id":{"source":"EnsEMBL","accession":"ENSOGAG00000010588"},"taxonomy":{"scientific_name":"Otolemur garnettii","id":30611}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Strepsirrhini","id":376911}}],"confidence":{"value":73,"type":"boostrap"},"taxonomy":{"scientific_name":"Primates","id":9443}},{"exon_boundaries":{"boundaries":[263,306,740,784,785,1236,1248,1607,2100,2487,2491,2683,2700,2701,2720,2766,2799,2825,2929,2937,3004,3017,3030,3041,3066,3129,3187,3315,3369,3392,3419,3466,3538,3593,3652,3743,3799,3183],"number_of_exons":39},"sequence":{"mol_seq":{"seq":"-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDEETSETVFPNDTS--AILK----SYFSNHDESLKKNDRFIPSVKDNENKSQR-ETGSHGLEKILDNSFSEVNYSKDHFEE--------S-MTKILED-EVHDTVADI-S-EEDSFSLCFSKYRTGNL-QKVRTSK--TRKKILPETKT---HECE-E-AKKQRNENIYSFTSKMKPTDSAPLDANVTN---QKP-LGCGSDKISKEVLLSS-ASEWSQLKISE-LNRTQIEKISL----LHSSSCDQNNSEKDLINIEKEC-INFSTSENSLPHISSLPK-SEKILNEETVANKKDTRQYLESHGDSLLAVGQARS---GT-VI-------TSPLQGIKKSIFRIRESPEETFST-VF--------TD--DTTNSNFK-ET-EASESGLQKYTVCSQKEDSLCPSSI-NGSWPVTATHTSV--SLKSTGLISTLKKKTKKFIYAIKDEASYQGKIIQKDQQSELTNSPT----HYEANAFETSLKIADS---GLLPS------VKRNCLQDDSEEPTLSVVNSFGTMLMKFSINKT-SSNNPIIFQDLDCKKAKNNKEKLQSFIAPEADYLSCLLERQSKDDPKS-QEVSDIKEKVLATTCHPTVYHS-EVEHSGT----HFQ------FQKSFLYDHDNTNPLTLTPSSE----DPLSNTVVISREKES-CKMSEKLKYKKCEASFEL-TK-------NMPVAKTEEMCALNENSEE----AELLPPKKYIPIVPPSVKMQFNQNIILT-IGKAQ---KETILRSEIT-GSLNSEELFPDNENS-VFQVTKGRNNPVLGNTE-ELHEVDLSYIKEPILQNSAMV--TCTDTDDKQPAQILITKDLDSS-DTVCGLIGE--NNVKQNQKMTLG-----EDLKSDI-LDV-DLKSNRKNDYMDKWS----------G---LLDPVSNHSFGGSFRTASNKEIKLSEHNVTKSKMLFKDIEEQ-YPTSLACVE-------------IVSTLE-------X--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------XXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXX---XXXXX----XXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX-XXXXXXXXXX---------------XXX------------XXXXXXXX---------XXXXXXXXXX-------XXXXXXX-----XXXXXXXXXXXXXXX--XXXXXXXXXXX---XX-XXXXXXXXX-----XXXXXXXXXX--XXX-XXXGNFVEENTENYKRNTEN-K-DSK--------------------------YTGAN-RNTCNLGESDSSDSDKN-NTV--HKDKNDVAS-ADQHNICLKLSNQVIKEGNSQ----SKESLSDLTCL-EVVKAKETCHVNTSNI-GQLTASKMEQNIKGFEIFDI--SFQTASGKNIRVSKESQNKVVNFFDQKPEE-ELNSC--SLNS--------KLISGINKNKMDISNHEEIDLV--KNETLKKGILVDT-RNPLLTLQQQPKCETEMIKEPTLL-----SFLTASGKKVKIAKESLDKVKNLFD-EKELD-NSEIISFCHERAKTLKDKDV--YKEGPEITCETAET-TVPKHEGIQNSLDDD--EKNLVFNET-AVLPRLLSDHLYGQTENCKTANTSSLE-VKVHETVEKETVNIPTTCYTKQPPYSTMENSALAFYTGHGRKISVSQMSLNEAKKWLRE--GELVDQPEKISTA-------------DYVGKLSHENSSN-----------NIIAESEKK-HLSKRQGLTYLYN-SMSNSYSY--RSDFCHSDELYNDSGYLSKSNIG-SGIEAVMKDVKDKI-NTSISEVMSTVRETNTYSQTVNEDTCVQKL-TDSSLCKNKN-----ATTKLAISDSNNFEVGP----------PAFSTASGKIVCVSHEMIKKVKEIFSD--NCSKI-LKQNTENDSGSC----------QACGDSEN--IF-PNA--ID-DESSMCSHKIFVDIQSE-VLQPNESK---SGLEKVSEMSSCHVGLKTSDKCKF--NIEKLPESVPFTNACGIFSTASGKSIHVSDVSLQKARQVFSEI--------EDNAK----------NNEHLDQFTREENTMTHTPECLS-PKKGFSYNKINSSAF----CGFSTASGKRVAVSESALHKVKGMXXXXX-XXXXXXXXXXXXXXXXX----XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XYSKDQENCFETE-AVEIG-AFMEDGELMDF------S-TDHAKRSFFTCQKY-EEIDLLNSRIRKRR--------G-TLVTVGEPPIKRNLLNEFDRIIENQEKY-LKASKSTPDGTIKDRRLFMHHISLEPVTCGPF--CASKEQKEIQKPNFTIPGQTF---LSKSHFYEHLTLEGSSSNL---SVSGQPLNKVS--ATRNEKI---------RHSITTDKPTKVFVPPFKPKS-FH-------REEQCVXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXX-XXXLSTSLQNARDIQDTRIKKKQSQCVFPQPGSLYLTKTSTLP-RISLKTAVGGRTPFARSHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRIWVYNHYRWIVWKLAAMEFSFPKEFANRCLSPERVLVQLKY-RYDIEIDGSRRSAIKKIMERDDTAAKTLVLCVCDIISSSTNI-----SEISSSKT---SSVDTK-KVATIELTDGWYAVKAQLDPPLLALVKNGKLTIGQKIITHGAELVGSSVACTPLEAPESLMLKXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYAEAQQKKLEDLLTKIQADFEAHE-XXXXXXXXXX--XXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXX--GCFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMESSEQGIQGLS-RDVTAVWKLRVTSYGQKEKD-SVI---LSIWRPSSDLYSLLTEGKRFRIYHLATSKSKSKSERASIQLAATRKTQYQQLSASDEILLQVYQPRELLHFDRLLDPDFQPPCSEVDLIGFVVSVVKKI------------GLTSLVYVSDECHNLLAIKFWVDLN----EDIIKPHLLIAASNLQWRPQ----LKSGIPTLFAGDFSMFSSSPKENHFKERFNKMKNTVE-NIDTFCSEAENKLMCILNANDPKWSTPTKGYTSEPI----------IATGNK--FMMSSPNSEINYRSPLSHCTP-VEKSVLTP-G------SAHMTSKS-CKGEKEIEDPKDCKKRR-ALDFLSRLPLPPPISPICTFVSP-AAKKAFQPPRSCS-TK----Y-ETPIKKKEFNSPE-MTPVKKYNEI-CLLESNSIADEELALINTQGLLSGSAGENHLTSPGESSQTAPT-----------------SSEDYLRLKRQDTTSLT--KGQENSQTSTQKNEAK---MED-------------------ISTKKYI-------------","is_aligned":1},"location":"GeneScaffold_2732:1286-173851","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSTBEP00000013856"}]},"branch_length":0.095336,"id":{"source":"EnsEMBL","accession":"ENSTBEG00000015907"},"taxonomy":{"scientific_name":"Tupaia belangeri","id":37347}}],"confidence":{"value":50,"type":"boostrap"},"taxonomy":{"scientific_name":"Euarchontoglires","id":314146}},{"events":{"type":"speciation"},"branch_length":0.004683,"children":[{"events":{"type":"speciation"},"branch_length":0.012038,"children":[{"events":{"type":"speciation"},"branch_length":0.000523,"children":[{"events":{"type":"speciation"},"branch_length":0.014719,"children":[{"events":{"type":"speciation"},"branch_length":0.156945,"children":[{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MPVEYKRRPTFWEIFKARCSTA-DLGPISLNWFEELSSEAPPYNSE---PPEESEYKPHGYEPQLFKTPQRNPP-YHQFASTPIMFKERSQT---LPL--D-QSPFREL-------GKV--VASSKHKTHSKKKTKVDPVVDVASPPLKSC---LSESPLTLRCTQAVLQRE----------K-PVVSGSLFYTPK--LKE-GQTPKPISESLGVEVDPDMSWTSSLATPPTLSSTVLI-ARDEEARSSVTPADS--PATLK----SCFSNHNESPQKNDRSVPSVIDSENKNQQ-EAFSQGLGKMLGDSSGKRNSFKDCLRK--------P-IPNILED---GETAVDT--SEEDSFSLCFPKRRTRNL-QKMRMGK--TRKKIFSETRT---DELSEE-ARRQTDD-KNSFVFEMELRESDPLDPGVTS---QK-PFYSQNEEICNEAVQCS-DSRWSQSNLSG-LNETQTGKIT----LPHISSHSQNISE-DFIDMKKEG-TGSITSEKSLPHISSLPE-PEKMFSEETVVDKEHEGQHFESLEDSI-AGKQMVS---RTSQA-------ACLSPSIRKSIFKMREPLDETLGT-VF--------SD--SMTNSTFTEEH-EASACGLGILTACSQREDSICPSSVDTGSWPTTLTDTSA--TVKNAGLISTLKNKKRKFIYSVSDDASLQGKKLQTHRQLELTNLSA----QLEASAFEVPLTFTNVNS-GIPDS-----SDKKRCLPNDPEEP--SLTNSFGT-----ATSKEISYIHALISQDLNDKEAIVIEEKPQPYTAREADFLLCLPERTCENDQKS-PKVSNGKEKVLVSACLPS-----AVQLSSI----SF------ESQENPLGDHNGTSTLKLTPSSK----LPLSKADMVSREKMC--KMPEKLQCESCKVNIEL-SK-------NI-LEVN-EICILSENSKT----PGLLPPGENIIEVASSMKSQFNQNAKI-VIQKDQ---KGSPFISEVA-VNMNSEELFPDSGNNFAFQVTNKCNKPDLGSSV-ELQEEDLSHTQGPSLKNSPMA--VDEDVDDAHAAQVLITKDSDSL-AVVHDYTEKSRNNIEQHQKGTED-----KDFKSNSSLNM---KSDGNSDCSDKWS----------E---FLDPVLNHNFGGSFRTASNKEIKLSEHNVKKSKMFFKDIEEQ-YPTRLACID-------------IVNTLP---------LANQKKLSEPHIFDLKSVTTVSTQSHNQSSVS-HEDTDTAP--------------------QMLSSKQDF--------HSN-NLTTSQKAEITELSTILEESGSQFEFTQFRK----PSHIAQ-NT---SEVPG----NQMVVLSTASKEWKDTDLHLPV--------DP-SVGQTDHSKQFEGSAG-VKQSFPHLLEDTCNKNT-SCFLPNINEM---------------EFG------------GFCSALGT-KLSVSNEALRKAMKLFSD-------IEN-SEE-----PSAKVGPRGFSSSAH--HDSVASVFKI---KKQ-NTEKSFDEK-----SSKCQVTLQN--NIE-MTTCIFVGRNPEKYIKNTKH--EDS---------------------------YTSSQ-RN--NLENSDGSMSSTS-GPVYIHKGDSDLP--ADQGSKCPESCTQYAREENTQ----IKENISDLTCL-EIMKAEETC-MKSSDK-KQLPSDKMEQNIKEFNI-----SFQTASGKNTRVSKESLNKSVNIFNRETD--ELTVISDSLNS--------KILHGINKDKMHTSCHKKAISI---KKVFEDHFPIVT-VSQLPA-QQHPEYEIESTKEPTLL-----SFHTASGKKVKIMQESLDKVKNLFD-ETQY--VRKTASFS-QGSKPLKDS-----KKELTLAYEKIEV-TASKCEEMQ----------NFVSKET-EMLPQ-QNYHMYRQTENLKTSNGTSSK-V--QENIENNVEKNPRICCICQSSYPVTEDSALAYYTEDSRKTCVRESSLSKGRKWLR----EQGDKLGTRNTIKIECV---KEHTEDFAGNASYEHSLV-----------IIRTEIDTN-HVSENQVSTLLSDPNVCHSYLS--QSSFCHCDDMHNDSGYFLKNKID-SDVPPDMKNAEG---NTISPRVSAT-KERNLHPQTINEY-CVQKLETNTSPHANKD-----VAIDPSLLDSRNCKVGS----------LVFITAHSQETE-------RTKEIVTD--NCYKI-VEQNRQSKPDTCQT----SCH-KVLDDSKDFI-C-PSS--SG--DVCINSRKDSFCPHNEQILQHNQSM---SGLKKAATPP---VGLETWDTSK---SIREPPQAAHPSRTYGIFSTASGKAIQVSDASLEKARQVFSEM--------DGDAKQLSSMVSLEGN-EKPHHSVKRENSVVHSTQGVLSLPKPLPGNVN-SSVFS----GFSTAGGKLVTVSESALHKVKGMLEEFD-LIRTEHTLQHSPIP-ED----VSKILPQPCAEI--RTPEYPVNSKLQKTYNDKSSLPSNYK-ESGSSGNTQSIEVSLQLSQMERNQDTQLVLGTKVSH--SKANLLGKEQTLPQNIKVKTDEMKTFSDVPVKTN--VGE-YYSKESENYFETE-AVESAKAFMEDDELTDS------E-QTHAKCSLFTCPQN---ETLFNSRTRKRG--------GVTVDAVGQPPIKRSLLNEFDRIIESKGKS-LTPSKSTPDGTVKDRSLFTHHMSLEPVTCGP--FCSSKERQGAQRPHLTSPAQEL---LSKGHPWRHSALEKSPSS--P-IVSILPAHDV--SATRTERT---------RH--S-GKSTKVFVPPFKMKSQFH-------GDEHFNSKNVNLEGKNQKSTD------------GDREDG-NDSHVRQFNK----------------------DLMSSLQSARDLQDMRIKNKERRHLRLQPGSLYLTKSSTLP-RISLQAAVGDRAPSACSPKQLYIYGVSKECINVNSKNAEYFQFDIQDHFGKEDLCAGKGFQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISSIWVANHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKY-RYDVEIDNSRRSALKKILERDDTAAKTLVLCISDIISPSTKV-----SETSGGKT---SGEDAN-KVDTIELTDGWYAVRAQLDPPLMALVKSGKLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSRLG--FFRDPRPFPLPLSSLFSDGGNVGCVDIIVQRVYPLQWVEKTVSGLYIFRSEREEEKEALRFAEAQQKKLEALFTKVHTEFKDH-EEDTTQRCVLS--RTLT--RQQVHALQDGAELYAAVQYASDPDHLE--ACFSEEQLRALNNYRQMLNDKKQARIQSEFRKALESAEK-EEGLS-RDVTTVWKLRVTSYKKKEK--SAL---LSIWRPSSDLSSLLTEGKRYRIYHLAVSKSKSKFERPSIQLTATKRTQYQQLPVSSETLLQVYQPRESLHFSRLSDPAFQPPCSEVDVVGVVVSVVKPI------------GLAPLVYLSDECLNLLVVKFGIDLN----ED-IKPRVLIAASNLQCQPE----STSGVPTLFAGHFSIFSASPKEAYFQEKVNNLKHAIE-NIDTFYKEAEKKLIHVLEGDSPKWSTPNKDPTREPHAASTCCASDLLGSGGQ--FLRISPTGQQSYQSPLSHCTL-KGKSMPLA-------HSAQMAAKS-WSGENEIDDPKTCRKRR-ALDFLSRLPLPSPVSPICTFVSP-AAQKAFQPPRSCG-T----KY-ATPIKKE-PSSPRRRTPFQKTSGV-SLPDCDSVADEELALLSTQALTPDSVGGNEQAFPGDSTRNPQP-----------------AQRPDQQVGPRSRKESL--RDCRGDSSEKLAVES----------------------------------------------","is_aligned":1},"location":"5:150522630-150569746","name":"Brca2-201","id":[{"source":"EnsEMBL","accession":"ENSMUSP00000038576"}]},"branch_length":0.034809,"id":{"source":"EnsEMBL","accession":"ENSMUSG00000041147"},"taxonomy":{"scientific_name":"Mus musculus","id":10090}},{"exon_boundaries":{"boundaries":[28,121,163,191,210,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MTVEYKRRPTFWEIFKARCSTA-DLGPISLNWFEELSSEAPPYNTE---PPEESEYKPQGHEPQLFKTPQRNPS-YHQFASTPIMFKEQSQT---LPL--D-QSPFKEL-------GNV--VANSKRKHHSKKKARKDPVVDVASLPLKAC---PSESPCTPRCTQVAPQRR----------K-PVVSGSLFYTPK--LEE---TPKHISESLGVEVDPDMSWTSSLATPPTLSSTVLI-ARDEEAHRNAFPADS--PASLK----SYFSNHNESLKKNDRFIPSVSDSENKSQQ-EAFSQGLEKMLGDSSSKINRFRDCLRK--------P-IPNVLED---GETAVDT--SGEDSFSLCFPKRRTRNL-QKTRMGK--MKKKIFSETRT---DGLSEE-ARGQADD-KNSFALEIEPRDSEPLDPSVTN---QK-PLYSQSGDISSEAGQCS-DSIWSQPDPSG-LNGTQTRKIP----LLHISSHKQSILE-DFIDMKKEG-TGSIT----FPHISSLPE-PEKMFSEETLVDKEHEGQHLESLEDSI-SGKQMVS---GTSQT-------ACLSPSIRKSIVKMREPLEETLDT-VF--------SD--SMTSSAFTEEL-DASAGGLEIHTACSQREDSLCPSSVDTGSWPTTLTDTSA--TVKNAGLITTLKNKRRKFIYSVSDDASHQGKKLQTQRQSELTNLSA----PFEASAFEVPFPFTNVDS-GIPDS-----SIKRSNLPNDPEEPSLSLTNSFVT-----AASKEISYIHALISQDLNDKEAILSEEKPQPYTALEADFLSCLPERSCENDQKS-PKVSDRKEKVLVSACRPSGRLAAAVQLSSI----SF------DSQENPLGSHNVTSTLKLTPSPK----TPLSKPVVVSRGKMC--KMPEKLQCKSCKDNIEL-SK-------NIPLGVN-EMCVLSENSET----PELLPPLEYITEVSSSVKSQFNQNTKIAVVQKDQ---KDSTFISEVT-VHMNSEELFPEKENNFAFQVTNESNKPNIGSTV-EFQEEDLSHTKGHSLKNSPMT--VDRDLDDEQAGQVLITEDSDSL-AVVHDCTKKSRNTIEQHQKGTAD-----KDFKSNSSLYL---KSDGNNDYLDKWS----------E---FLDPLMNHKFGGSFRTASNKEIKLSEDNVKKSKMFFKDIEEQ-YPTSLDCID-------------TVSTLQ---------LANKKRLSEPHTFDLKSGTTVSTQCHSQSSVS-HEDTHTAP--------------------QMLSSKQDF--------HSSHNLTPSQKAEITELSTILEESGSQFEFTQFKN----PSHIAQNNT---SAVLG----NQMAVVRTASEEWKDVDLHLPL--------NPSSVGQIDHNKKFECLVG-VKQSSSHLLEDTCNQNT-SCFLP-IKEM---------------EFG------------GFCSALGT-KLSVSNEALRKAMKLFSD-------IENISEE-----PSTKVGPRGFSSCAH--HDSVASVFKI---KKQ-NTDKSFDEK-----SSKCQVTVQN--NKE-MTTCILVDENPENYVKNIKQ--DNN---------------------------YTGSQ-RNAYKLENSDVSKSSTS-GTVYINKGDSDLPFAAEKGNKYPESCTQYVREENAQ----IKESVSDLTCL-EVMKAEETCHMKSSDK-EQLPSDKMEQNMKEFNI-----SFQTASGKNIRVSKESLNKSVNILDQETE--DLTVTSDSLNS--------KILCGINKDKMHISCHKKSINI---KKVFEEHFPIGT-VSQLPALQQYPEYEIESIKEPTLL-----SFHTASGKKVKIMQESLDKVKNLFD-ETQY--VRKTTNFGHQESKPLKDREDY--KERLTLAYEKIEV-TASKCEEMQ----------NFVSKQT-EMLPQ-QNDHMYRQTENL-TSNGSSPK-V--HGNIENKIEKNPRICCICQSSYFVTEDSALACYTGDSRKTCVGESSLSKGKKWLR----EQSDKLGTRNTIEIQCV---KEHTEDFAGNALYEHSLV-----------IIRTEIDTS-HVSENQASTLFSDPNVCHSYLS--HSSFCHHDDMHNDSGYFLKDKID-SDVQPDMKNTEG---NAIFPKISAT-KEIKLHPQTVNEE-CVQKLETNASPYANKN-----IAIDSAMLDLRNCKVGS----------PVFITTHSQETV-------RMKEIFTD--NCSKI-VEQNRESKPDTCQT----SCH-KALDNSEDFI-C-PSS--SG--DVCINSPMAIFYPQSEQILQHNQSV---SGLKKAATPP---VSLETWDTCK---SIRGSPQEVHPSRTYGIFSTASGKAVQVSDASLEKARQVFSEI--------DGDAKQLASMVSLEGN-EKSHHSVKRESSVVHNTHGVLSLRKTLPGNVS-SSVFS----GFSTAGGKLVTVSESALHKVKGMLEEFD-LIRTEHTLQHSPTP-ED----VSKIPPQPCLES--RTPEYSVSSKLQKTYNDKSRSPSNYK-ESGSSGNTQSLEVSPQLSQMERKQETQSVLGTKVSQ--RKTNILEKKQNLPQNIKIESNKMETFSDVSMKTN--VGE-YYSKEPENYFETE-AVEIAKAFMEDDELTDS------E-QTHAKCSLFACPQN---EALLNSRTRKRG--------GMAGVAVGQPPIKRSLLNEFDRIIESKGKS-LTPSKSTPDGTIKDRRLFTHHMSLEPVTCGP--FCSSKERQETQSPHVTSPAQGL---QSKGHPSRHSAVGKSSSN--P-TVSAL----------RSERT---------RHSVS-DKSTKVFVPPFKVKSRFH-------RDEHFDSKNVNLEGKNQKSAD------------GVSEDG-NDSDFPQFNK----------------------DLMSSLQNARDLQDIRIKNKERHHLCPQPGSLYLTKSSTLP-RISLQAAVGDSVPSACSPKQLYMYGVSKACISVNSKNAEYFQFAIEDHFGKEALCAGKGFRLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISSVWVSNHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKY-RYDVEIDNSSRSALKKILERDDTAAKTLVLCVSDIISLSTNV-----SETSGSKA---SSEDSN-KVDTIELTDGWYAVKAQLDPPLLALVKSGRLTVGQKIITQGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSKLG--FFHDPRPFPLPLSSLFSDGGNVGCVDVIVQRVYPLQWVEKTVSGSYIFRNEREEEKEALRFAEAQQKKLEALFTKVHTELKEH-EEDIAQRRVLS--RALT--RQQVHALQDGAELYAAVQDASDPEHLE--TCFSEEQLRALNNYRQMLSDKKQARIQSEFRKALEAAEK-EEGLS-RDVSTVWKLRVTSYKKREK--SAL---LSIWRPSSDLPSLLTEGQRYRIYHLSVSKSKNKFEWPSIQLTATKRTQYQQLPVSSETLLQLYQPRELLPFSKLSDPAFQPPCSEVDVVGVVVSVVKPI------------GLAPLVYLSDECLHLLVVKFGIDLN----ED-IKPRVLIAASNLQWRPE----STSRVPTLFAGNFSVFSASPKEAHFQERVTNMKHAIE-NIDTFYKEAEKKLIQVLKGDSPKWSTPNKDPTREPYPASTCSASD-LASGGQ--LPRSSPTDQQSYRSPLSCCTP-TGKSTPLA-------HSAWMAAKS-CSGENEIEDPKTCRKKR-ALDLLSRLPLPPPLSPVCTFVSP-AAQKAFQPPRSCG-T----KY-PTPLKKEGPSSPWSRAPFQKASGV-SLLDCDSVADEELALLSTQALVPHSVGGSEQVFPSDSTRTEGP-----------------SASTEARPANRSKRESL--RDCRDDSDGKLAAETV---PDY-------------------S-------------------","is_aligned":1},"location":"12:491025-531772","name":"Brca2-201","id":[{"source":"EnsEMBL","accession":"ENSRNOP00000001475"}]},"branch_length":0.043904,"id":{"source":"EnsEMBL","accession":"ENSRNOG00000001111"},"taxonomy":{"scientific_name":"Rattus norvegicus","id":10116}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Murinae","id":39107}},{"exon_boundaries":{"boundaries":[28,118,122,164,192,209,248,271,310,755,1044,1104,1105,1422,1425,1867,2769,2802,2828,3006,3068,3131,3189,3317,3371,3423,3468,3540,3595,3654,3745,3802,3858,3887,3914,4010],"number_of_exons":37},"sequence":{"mol_seq":{"seq":"----MPIESPGRPTFFEIFKTQCSKA-DLGPISLNWFEELSSEAPPYNSE---YADESEYKINSYEPNSFKTPQRKP--FYQLASTPIAFKEQGQTL---RV--QP-SPLKELGKY-LDLGKD--IANNEHKNCHT---KVEHIIDVTSPSLNSC---LTEXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXX--XX-DKKPKHISESLGVEVDPDMSWSSSLATPPTLSSTVLI-VRDEETSGTIFPNDPT--VILK----NYFSKHKESLKKNYHFIPSVTNSENKNQR-EASSHGFGKVLENSFGKVNSDKDDFRT--------S-MTDTQED-EVHETVADF-S-EEDSFSLCFSKKRTGNL-HKTRLDK--TRKKIFCETST---DEFS-E-KDKQVKEDKYSFASEVEPSDDDPLDTNLGN---QNP-FGHESNKASKEAVPSS-DWEWSQLNLSG-LNETQMEKMPL----LPISSYDQGNSENNLIDTEKEC-MTSINTKNSLLPISSLPQ-SEEILQEETLIDKRDEEQQLESHEDSFLVAKQIVP---GTSPT-------VSPFPSIKKSLFRIRQPSEETSDE-VF--------SG--NLTKTNFKEES-GTFESGMEIRAICSQKADSLFPSSLDSEKHPATSTHTSV--TLKIEGLISSLKKKKKKFIYAIDDETSCQVKKSQKLQKSEPTNHSS----QCEA-----PLIFTDAYS------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXX------XXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXX-XX-------XXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXRNSPVLGTTE-ELYEADHSCVKEPIFKNCMMV--IDTDIDDKQAAHVLITE------GLIYDLTEENKNSAKQNLKRTLS-----QELKSNSFLDIKDIKSNRNNYYEDKLS----------G---LLNPLTDHSFRGGFRTASNKEIKLSEHNIKKSKVLFKDIEEK-YPTSLPCVE-------------IANTNTLT-----L--DHQKKLNKLNISNSKLVNTVSPSVQSGTFIPDCENNHTSP------------------------LKQDI--------SANHNLTPSQRAEVTELSTILEESGSQFEFTQFRK----LCHRAQNLT---SEVPK----NQMADSNHT------SDLHL---------------GQVDRSEKLKEVAR-IKQTSACLLK-NYNKST------GESEK---------------EFQ------------GFYSALGT-KLSISTEALQKALKLFSD-------IDIIHEE-----TSVEAEPR-FSSSNS--HDSFVSAHKIE---SH-TNNKNLHEK-----NSKCQLILQN--NIE-MTPGIICEENTENYMRNTGS-K-CNR--------------------------CTDMS-RSICKLQESDGTDSSRNDDKVYIHKDESNLQC-TDRHNIYIKSASQFTKEGNIQ----TKECLSDLTCL-EVMKAEETCLTNSSNK-EQLTVGKKEQNVKDFDI-----TSPTASGKNNRVPEES----SNFFDKHMG--EISNFSNSFNS--------ELLSGIIKSKVDISCHGETDMT--ENKISEEGIPVGN-RKQPXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--X---------XXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXX-------------XXXXXXXXXXXXX-----------XXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-X-XXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX----XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXX-XXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XTTKERQEMQNPNVTAPDKGF---LSKPHLDKH--LEKSSSNL---PDSGQLVHKIP--NTRNETM---------RQSVTIGKLAKVFVPPFKVKSHLH-------KDEHHVSKQTNFEEEKQKQRKIEE------CGSSDCEN--INSEIHQFSKDSSCQ-EATMIFTKCKEPL---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALCDTPGVDPKLISRAWAYNHYRWLIWKLAAMEFSFPKEFANRCLNPERVLLQLKY-RYDMEIDRSKRSAIKKIMERDDTPAKTLVLCVSDIISST--------SETCSNKT---DGADTK-NVAMLELTDGWYAVKAQLDPPLLALLKNGRLAVGQKIITHGAELIGSPDACAPLEAPDSLMLKISANSTRPACWYTKLG--FFPDPRPFPLPLSSLFSDGGNVGCADVIVQRVYPIQWMEKTPSGLYIFRNEKEEEREAAKFAEAQQKKLEALFTKIQTEFEKHE-XXXXXXXXXX--XXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXX--SYFSEEQLRALNNHKQMLNDKKQAQIQLEFQKAMESAEKVEERLS-RDVTPVWKLCIVSYGKKGRD-AVT---LSIWRPSSAVLSLLTEGNRYRIYHLATSKSKCKSERANIQLTATKRTQYQQLPASDEILFQVYQPREPLQFSRLLDPDFQSPCSEVDLIGFVVSVVKKI------------GLAPLVYLSDEYHNLLAIKFWIDLN----EDVIKPHTLIAASNLQWRPE----SKSGIPTLFAGDHSMFSASPRENHFQERFHKMKNTVE-NIDVLCNDAKKKLMSLLNANYPKWSNPTKDYKSEPCPAYSA-----LGVDNE---VLSSPSSKQNYQSHLSLCTP-KEKCLPNP-V------SAQMISESSHKEEKEIDDP-TCKKRK-ALEFLTRLPLPPPVSPICTFV-P-AAQKAFQPPRSCG-TK----H--RTTKRKELNFPP-VTPFKKVNEI-SLLERDSIADEELALLNTQSLVSDSMGESHLL-IRESKRTTPS-----------------STQDHLGQKKQQESLM---GGQGNPQAGTKECEK----------------------------------------------","is_aligned":1},"location":"GeneScaffold_1038:358641-411759","name":"Brca2-201","id":[{"source":"EnsEMBL","accession":"ENSDORP00000006609"}]},"branch_length":0.116701,"id":{"source":"EnsEMBL","accession":"ENSDORG00000007049"},"taxonomy":{"scientific_name":"Dipodomys ordii","id":10020}}],"confidence":{"value":58,"type":"boostrap"},"taxonomy":{"scientific_name":"Sciurognathi","id":33553}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,651,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798,3367],"number_of_exons":28},"sequence":{"mol_seq":{"seq":"----MPIGSKERPTFFEIFKTRCSGA-DLGPISLNWFEELSSEASLYNSE---PAEESEYKTHSYEPNLFKTPQRKLS-YHQLASTPIIFKDQGQI---------Q-SPLQELGKYRSDLGKN--ITNSERKSRHTMKAKVGQENDVTSPPLNSC---LSESPLALQCTRVTPQRE----------K-PVVCGSLFHTPK--LVK-GQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VKDEEAPETVFPNDT--TTILK----SYFFNHDESVMKNYRFSPSVSDNENKNER-ETSHHGLGKMLGNSFGKENSYKKHVGK--------S-MPTALED-EVHEIVADI-S-EEDSFSLHSSKYKTGIL-QRIRMGK--TRKKIFSETRT---DEFNEE-AEKQMKENKHLFASVIEPSGSGPLDSNITN---QK-PIGNESDKISNEVVPSS-GCEQSKLTFSG-LNGTQMERIHL----LHI-SYDQNNTEKDLKDTRKEC-SSCIISENPLPHTSSLPN-SKKILNEKTLVDRRVEGQHLKSHEDSFLAATHAPS---EISPV-------VSPFQGIKKSIFQ--------------------------------------------------------TFCPSSVDNGSWPATISHTS-----KHTGLISTLKKKTKKFIYTINDETFHQGKEIQKDQKLELTYSAA----QLEASAFEAPLTFTNPDS-GLLHS----S-VKRNYLQNDAEEPTLSLINSSGTILRKCSNNQD-SHVNTIVSQDL--QEGEVHKEKPKSFIAPETDFLSCLQERQCEDNAES-QKVSEKKEKVLVAACHPVVQHL-EVESGGI----HFP------SQKVLL-DDDNTNTLLLTPSSR----D----PGMISRGKESY-KMSEKLKCKNCEGSIES-SK-------NSPMEKCQEMCFLNENSKK----PELLS-KKYVTEVSPSMNMQFNQNINITVIQKGQ---EKTPLISEIT-VNPNSKELFPDIENNCVFQITSERNNRVLGNTK-ELHEADLSCVRKTFPKNSTMV--VDTDMAEKQVAHVSVSDSIDSS-GIVHDLTEENRNRVKQQLKIISG-----QDLKANTSLSL---KSNRSKGFMDKWA----------G---PLDPVSYHNVGGSFRTASNKEIKLSDHDIKKSKMLFKDIEEQ-YPASLGCIE-------------IVNTLS-------F--DNQKKLNKPCVSDSQSVNTVSAYVKSSTFLSDFENNHTTP--------------------QVLPLRGDF--------NSNHTLTPSQKAEIKELSTILEESGSQFEFTQFRK----TSQIIQNNT---FEVPR----NQ-TGLKTSSEEWKD-DVHQTID--------TSSVAQVESSKKFEGAVG-VKQKFAHLLKNNCNKSAS-NYLTDENK----------------DFR------------GFYSARGT-KLSISSEALQKAVKLFSD-------IENISEE----T-KAEVDPGSFSSSKC--PDSIVSIFKME---SH-SDDNNLNKK-----NNECQLTLQN--KFE-MATHILDEENTENYMKNTEN-E-DNK--------------------------CTNDN-RNTCKLEESDQGDSSKN-DTVSGHKDENDLPC-TDQHNIDLKLPSQFVKEGSTQ----FKESLSDLTCL-EVVKAEETCHVNFFNKE-QLTADKMEQNIKDCGIFDI--SFQTASGKNINVSKESLNKVVNFFDQKTE--ELSNFSDSLNS--------KLLSGINKKKMDISRHGTIDMV--KNKILKEGIPVDI-DSQLLTLQQQPEYEIEKNKESNLL-----SFHTASGKKVQIAKESLDKVKNIFD-EKKQD-VSKITSFTQQGTKTLKDRKD--CKG-FELACEMI---TVPKCEEMQDSLINN--EKKIVYNEP-GVLPR-LSDDLYGQTKHLDTLN-ISLK-VKMHEHIEKETTNSPTACRTNQFSYSATGDSALAFYTGHGKKISVNQASLLEAKQWLRK--EELDGQGERNTAK--------AESIKEYGGNPLYENSSD-----------SIMTEKDKI-HFSEKQDSAYLSNNSMSNSYSAFCHSS-----DVCDDSGYLSKNKSN-SDIELVMK---DKK-NTSF-------RKADIYPQIVNEDTSVQKFVTNFSPCKSKD-----RTTNMAIPDFKSFEIGP----------PAFSTASGKIVCISRDAVRKVKKIFTE--DHSNV-IKENTENKSDICQGKIVKAYS-EALDNLEDVI-F-PNS--IGDEEC-MPSHKVFTDIQSEQIVQHNQKL---SGLGKVSEISPC-VNLETSDMCEF--NRGELPKSFSSTNACGIFSTASGKSVQVSDTSLQKARQIFSEI-------E-DNANQLFSKVSLKSNEEHSNPFTREKSTMAHAPPNVLSPGKSFLCNI--NSSF----SGFSTASGKKVAVSESALHKVKGMLEEFDL-MGTEQTLQYSPTSRQD----ISRMLPPPRIEK--RIVEHSVSSKMEKAYNNEF----NDNVENASSGNNHCVKVSPYVSQLKQGRQ-HLVLGTKLSLVE-NTHLLGKEQTLSKNI-IEIGQTETFSSVSVKTNVEVCS-TYSKDPENCFETE-AVEIAKAFMEDGELTDS------EPPTHAKHSFFMCQKN-EEMILLNSRTGKRR--------GNALVSVGEPPIKRSLLNEFDRIIENEEKS-LKTLKSTPDGTINDRRLFTHHISLEPIICGPV--RTIKKQQETQKPNFTVPGQKF---LSKSHLYEHLTSEKSSSNL---PVSEQPLYKD--PATRKEKM---------RYSITTGKSNKVFVPPFKTKSHLY-------RDEHCVSKNINLCENKQKQRNINE------CGSCNKENNINDSDIHQFDKNSTSQ-VTTTIVPNCEEES-L-DLIISLQNARDKQDMRIKKKQGQHIFPQPGSLYLAKTSTLP-RISMKAAVGGQAPSACSHKQLYMYGVSKHCIKINSKNAGSFQFHTQDYFSKEDLWSGKGVQLADGGWLIPSNDGKTGKEEFYRALCDTPGVDPKLISRVWVYNHYRWIIWKLAAMEFAFPKEFANRCLNPERVLLQLKY-RYDVEIDRSRRSAIKKILERDDTAAKTLVLCVSDIISSITDI-----SETSSSKT---SGVDAK-KVAIIELTDGWYAVKALLDPPLLALLKNGRLAVGQKIVIHGAELVGSPDACTPLEAPESLMLKISANSTRPACWYTKL--GFFPDPRPFPLPLSSLFSDGGNVGCVDVVVQRVYPMQWMEKTSSGLYIFRSEREEEKEAARHADAHQKKLETLFAKVQAEFEEH-EEHTTKQCVPS--RALT--RQQVHALQDGAELYEAVKNAPDPDYLE--GYFSEEQLRALNNHRQMLNDKKQAQIQLEFRKAMASAEQEEQGLSR-DVTAVWKLRIVSYRKKEKD-SAM---LSIWRPSSDLYSLLTEGKRYRIYHLATSKSKSKSERAHIQLSATKKTRYQQLPASDEVLLQVYHPREPLHFNRLLDPDFQPPYSEVDLIGFVVSVVKKI------------GLAPLVYLTDECHNLLAIKFWIDLN----EDIIKPHVLIAASNLQWRPE----SKSGIPTLFAGDFSTFSGSPREGHFQQRLNKMKNTIE-NIDIFCNDVEKKLMHLLNANDPKCSTPNKEYTSEPHTTQTV-----LSTGNK--FLMTSPNSEINYQSPLSLCTP-KGKSVSTP-------VSTRMTSKSCSKGEKEIDDPKNCKKRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-SK----Y-ETPIKKKELNSPQ-MTPLKKFNEI-SLLESDSIPDEELALINTQAILSGSARKSQL-SLSDSMRTAPS-----------------GSRDSLRQKRH-MTSLV--RDEENSQNSTEECETS---IQD-------------------TSAINLPKYL----------","is_aligned":1},"location":"JH393282.1:26945680-27015735","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSSTOP00000004979"}]},"branch_length":0.082969,"id":{"source":"EnsEMBL","accession":"ENSSTOG00000005517"},"taxonomy":{"scientific_name":"Ictidomys tridecemlineatus","id":43179}}],"confidence":{"value":3,"type":"boostrap"},"taxonomy":{"scientific_name":"Sciurognathi","id":33553}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,743,2101,2174,2502,2768,2801,2827,3004,3067,3130,3188,3316,3370,3420,3467,3539,3587,3594,3653,3744,3800,3918],"number_of_exons":31},"sequence":{"mol_seq":{"seq":"----MPIGSKERPTFFEIFKRRCDKA-DLGPISLNWFEELSSEAPPFNSE---PAEESEYKVNTYEPNPFKTPQRKP--CYQLASTPIIFKEQGQT---LP--LY-QSPLNEL-------GTD--IADTELKNCHTVKANVDRISDVTSPPLNSC---FSESPLVLRCTQKTPQRK----------M-PVICGSLFHTPR--LVK-GQTPKHIPESLGAEVDPDMSWSSSLATPPTLGSTVLL-VRDE-VSETIFPNDT--TVILK----HSLSSHDENLKKNDSFIPPVMENENKNQR-EASHSGLGEVVGNSFGKTCSSKDHFGK--------L-MPNPLEN-EVHETVTDI--FDEDSFSLCFPKYRTGN---LQKTSK--TRKKIFHEART---DDF-----KEQMKENKHSLTSEMEPNDGDPLDSDVAS---QK-PLGPESDRISKEAAPSS-SCEWSQLTFPG-PNATQRKEMP----VLPVSSYDQDNSGKDSIESEKES-SNHNTSENSLPHTSSL---SEKISNGEKPVDERDGRQHPESHEDSIRAVKGTVS---WTSPV-------SPLFQGAKRPIFKIGEPSEDTFNT-VL--------SD--IVMKPNFK-ET-ETSKSGLEMYTDCSQKEDSLCLSSVDNRSLPAAIPHSSV--TLKNTGLISSLKKKTKKFIYAINDKACYQRENLQENQKTELTSHSA----QFEADTFKASLTFTNADA-GLSHS-----SVKRNCFQNDPKESTF-LTNSSGTSPRKHSNNES-SYANKIISQDLNYNETKLNKEKSQSLTSPETDFLSCLQKRRWDDDPKS-QKVSDIKENVLVVTCQPEARHS-EAEHSGI----LF------QSQKSFFDGHDNTSPLTLTPSSK----DPLLNPVMISKGKKS-YKISEKLKRENCETGIEL-AQ-------NISIENNQEICVLNLNSKK----TELLPPEKYVSAASPSVTMPFSHNTNLTATQEDQ---EETSLISEMP-GNPNSEELFAGNKNNFVFQITDESS-PVLGKTK-EVHGSDCSFMKESILQNSAMV--VDTDIDDKQVVQMPITEDFGPS-NTIHDL-KENRTDVKQHL--ASG-----QDLKSDLSLD---RKPNRN-DYTHKMT----------V---ILGPVSSHSFGGGFRTASNKEIKVSQHYIKKGKMLFKDIEEQ-YPTSSAPVE-------------IVNAL----------LNNEKKLNKPHAFDLQSVNTVSTYVQRSASISDHEN-HTAS--------------------QRLSVKQDF--------NSNLNLTPSQKAEITELSSILEESGSQFEFTQLRK----PNHLIKSNT---LQVPG----NQMTALSTTSKESKDVNLQAII--------DASSICQVGSSKKFGGAAG-EKQKSACLLKNNPNKSA-AGFLTNENEV---------------AYR------------GFYSGLGTKKLSVSSEAPQKPLKLFSD-------IENISEE-----TSDKVDP-SFSASKC--YDSVASVFKI---ENH-NNNKNVNVK-----NS-CQAVLQS--NAE-MTTGNFAEENTENCMRNSEN--EDNKY--------------------------IGTS-TNNCKLGKPGGTDSSKN-DTGYIQKD-NDLPC-KDQHNMHLKLSSQFMSEVSTE----LKETLSDLTCL-EVVKAEETCYINSN---EQLTTDEMEQYTNNFGI-----SFQTASGKNISVTKESLNKAVNLFDQETE--EWNDFSDSLNC--------KLLPGIK-NKMDISSHEETNVM--KNKILEKSTPAGT-AAQLCVLQQ-PECKIEN--EPNLL-----GFYTASGKKVNIAKESLNKVKNLFD-ENRQ-DVSKITKWGHQVAKILSDRQDC--EERLELARETVAITDIPQCEEMPS-----------------------VSGGLHRQTKNLKASNSISLK-VKVPENVEKGIANPPTTSCTDQFSYSAIKDLPVAFYTGHGKKIPVNPALLFKATKWLK----DLNDEHEE-----------------DCVGNP-----------------------------------------------------------------SRYLSKNQVD-SGTELVM-NVKDKN-NTDFSEVVPTIK-VSTHPQAINEDVCVQQPVTISSPFKSKN-----PAVNVAVSDSGNYEVGP----------PAFSTASSKMVFVSQDS--TEKQVFIE--NCNKT-INQNTESKSDTCQRETVTGS--KALDNSEDAI-F-PDS--PDDEEC-VRSCKSFADTQSEESLQHNKSM---SGLETIFE-RPSYVSLKAPDKCKF-SDTEKLPKTMSS-NIYGIFSTASGKSVQVSNGSLQKAKQMFSKT--------EDSAKQLFSKV-FKSS-EHSDQFTKEEITVMRTPSKHS----------ARSTAF----SGFSTASGKQVSVSESALHKVKGMLEEFD-LIQTAYTLGHSTSSRQD----VSKIPL--CIDE--STPQHSIDFKMQKNCNNEYKVSSNYNTESSSSEGNHSVTLSPCLSQFKQDKQ-HLVLGTRGSLF-ENAHILREEQAFPQN-SMEISKTETFSNDSVRTSAEVCS-PNPEEPETYFETE-AVEIAKAFMEDDELTDS------EPPGHPGHSLSTCQKK-EG-VLLNSRAGKRR--------GGALVSVGESQIKRSLLNEFDRIKENEEKS-LKASKCTPDGTVKDRKRFTHHISLEPVTCGP--SCTTSNRQEIQNLNCTAPDQEF---LSTSHLYEHLTLEKSSTS---LPVSRQPFYKV--PAVRSENT---------RYSTTASKPVKVFVPPFKTKSHFH-------RDECFVSRDINLEENKQKQQNIDD------CGSDDSENNVDGSEIHQFNKNCSNQ-GTVKIFPKCKEEP-LADLMTSLQNARKIQDIRIKEKEKQHIFPQPGSLYLAKTSSLP-RISLKAAVGGRVPSACSHKQLYMYGVSIHCMKINSKNAESFKFHIQDYFGKEDLQAGKGIQVADGGWLIPDNDGKAGKEEFYRALCDTPGVDPKLISRVWVCNHYRWIIWKLAAMEVAFPQEFASRCLNPERVLLQLKY-RYDVEIDRSRRSAIKKILERDDIAAKTLVLCVSDIVSSNTNT-----SEGSGDKA---SA-DIK-KAAVVELTDGWYAVRAQLDPPLTTLLKSGRLAVGQKVVTHGAELVGSPDACAPLEAPESLMLKISANSTRPARWDARLG--FLPDPRPFPLCLSSLFSDGGAVGCADVVVQRVYPVQWVEKTSSGLYIFRNEREEEKEAAKHAEAQQKKLEALFSRIQAQFEER-EANPAKRCTSS--HALT--RQQVRALQDGAELYEAVRSAPEPGYLE--GCFSEEQLRALNKHRQMLDAKRQAQMQLEFRKAVEHAEQGERGLA-RDVAALWRLRVVSHERKEDC-SVI---LSIWRPSSDLHSLLTEGKRYRIYHLAASKSKSKSERANIQLT----TQYQQLTASDEILLQAYRPRQALCFSRLLEPDFQPPYSEVDLIGFVVSVVKKI------------GLAPLVYLTDECYNFLAVKFWIDLN----EDIIRPHMLVAASNLQWRPE----SNSGIPTLFAGDFSVFSASPKEGHFQERFNKMKTVVE-NVDTFCNDAAEKLTHFLGVSDPKRAPPSTDCTSELHTAQTG-----LGTRNK--CLMSSPSDEINYQSALSLCCP-KGKSVSTP-------IAAQITSKS-CAEQKAVNDPKNSKKRR-ALDFLSRVPLPPPVSPICTFVSP-AAQKAFQPPRICD-T----KY-ETP----KLDFP-QMTPLKKASAV-SLLESNSIADEELAMINTQALLSGSAGENQLPSARESRRTAPS-----------------SSGDYLGQKGHCAVPLV--TGQENSQASTGECKSN---LQD-------------------TSRIKNLSKRLQRRQKHK--","is_aligned":1},"location":"scaffold_6:33778275-33853154","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSCPOP00000004635"}]},"branch_length":0.136169,"id":{"source":"EnsEMBL","accession":"ENSCPOG00000005153"},"taxonomy":{"scientific_name":"Cavia porcellus","id":10141}}],"confidence":{"value":3,"type":"boostrap"},"taxonomy":{"scientific_name":"Rodentia","id":9989}},{"events":{"type":"speciation"},"branch_length":0.051631,"children":[{"exon_boundaries":{"boundaries":[27,121,164,191,208,247,270,309,743,2097,2767,2800,2826,3004,3066,3129,3187,3315,3369,3419,3466,3538,3593,3651,3653,3743,3799],"number_of_exons":28},"sequence":{"mol_seq":{"seq":"----MPIGSKERPTLFDIFKMRCNTTVDLGPISLNWFEELSSEAPLYNSE---PAEESECKINNCEPNLFKTPQRKLS-YHQLASTPIIFKDQGPSL---QL--YQ-SPLKELDKYRSDSGKD--TANNARKSCCTMKSKIDQANDVASPLINSY---LSESP-VLQYTNVTPQRK----------K-SVVCGSLFHTPK--LMK-GQTQKHISESLGAEMDSDMSWSSSLATPPTLSSTVLI-VRDEEASETV---DT--NAILK----NHFSN-DESMNKNGRFIPSVTESENKNQR-EARSQRLRKVLGNSFGKVNSCKDHFGK--------S-MPNVLED-EVCESVANI-S-EEDSFSFCFSEYKMENL-KELKSEK--TTEKNIYETKT---DTY-DE-AEEQMKENKHSFAFEIEAKNSDPLDSNLTI---QK-PLESGNDKVSKELVQS----EWSQLSVSG-LNEIQIEKISM----VHVSSCDQHNSEKDLIDTEKSC-INFITPENSLSHISGLPK-LEKILNEETVVHKRDERQHVESH-DSILGAKPTTS---EISPV-------VSPFQGIKKSLFKIRESAEETLGT-VF--------LG--DMSNSDLNETAE-IPEREMETHAFYSQKENSLCESFVDDGSRPATVTHSSV--TLKNASLISTLKKKTKKFIYAVKDE----GKKIQEDQNSELTNCSA----QFEANTLDVPLVFTNADS-GLLHS----S-VRRNCLQVDSEEQTLSKTNSFGTILRKYSNDEN-SSNNAVTSQDLNYKEAKLNKEKLPSLITPETDYLSCLQERQREDNLKG-QQVSNIRAKIVSSAYHPAIQHL-EMECNST----YSQ------SQNGFLDNHDNTNTCILTPSSK----DLASNSAVISGEKESY-KMSEETKYRNCESDVEL-TK-------NSPIEKNQEMWGLSENFKK----AELLPLEKHVIITSPPMKVQFNKITNLTVIQQDQ---EETTLISEIT-VNSNSEELFPDNENSFVFQRTNERNNPVSGNTE-ERNEIDLNYMEESNLQNSTMV--VHEDIDDKQTTQVLIAKDSDSS-NMVHDLIEENRNTVTQHLKMTLG-----QDLKSGIPLDI-HMKSNGNNDYMDRWS----------G---LLDPISNHSFGGSFRTASNKEIKLSEHKINKSKMLFKDIEEQ-YPTSLACVE-------------TLNTVS-------L--DNQKKLRKPDIFDSQSNNAISAYMQNSAFVSDCENNHTAT--------------------QVLSLKQDL--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSHITQGDT---FEVPE----NQMTILNTTSEECKDGNHHLSIN--------VSSLGQVERSKKFEDAVG-TEHKFACSLKNNCNKSAT--YLTDENEV---------------VFR------------GFYSALGT-RLNVSSEALQKAVKLFSD-------IESISQE----T-SAEVYPRSFPSDKC--HDSIASVIKVE---NH-NNDQNLSEK-----NNKCQLISQN--DSE-VTPDVFGNENTENYKRNTED-E-DN----------------------------------DRNKLRESDVSDSRKN-YTVDIHTNENDLQC-INQH-------AQFVKEENTQ----IKESLSDLTCL-EVVKAEEIRHINTSNEE-ELTTDTTEQNVKAVGIFDI--SFQTAAGRNIKVSKESLNKVVNFFDKETEE-ELNNFSNCLKS--------KLLCDMNKNKVDFSSHEEPDIV--KNKIFKESIPVST-ENQLLIVQQQPECGIEKIKEPTLL-----GFHTASGKKVKITKESFDKVKNLFD-EKQ---DSEIASFIHQGANTLKDMEN--CKEGLELALDAIEI-TVPKCEEIQNYLDCN--DKNFAFSDT-RLLPR-LSDNLHRQTKSLR-TNSISLK-IKIHENTEKEALGNATGCFPNQSL--TIENSDLAFYTGHGKEVSVSQASLFEAKKWLRE--GELEDQSEKNAAK---------KYPDSYVGNPSYENSSN-----------SIITQSDKN-PLSGKQDSPYLSN-SVSNSYS--CHSD-----EIHNHSEYPSKNKIA-SGLEPLVKNVDQN------TKVIPSVREEATCPQTINEDTCDPKCVTDSSSCRNKE-----KAIRLTVSHSDNSKVGP----------PIFSTASGKTVCVSHEAIKKVKEILID--DYSEV-IKPNTESKSDTSQTKTL-----TLLEDSKD-I-F-PNS--IENGGYNMYSHKVFADIENEQILQHNQSM---SGLEKVSDMSPCHVSLKTSDVCNF--NLGEHPQSVSYTNS-GVFSTASGKSVHVSDASLQKAKEMFSET-------E-DSAEQLFSKVSFKSK-ECSDQFTREENSMTDIPKNLLSSQKDFSNNVINSFAF----SGFSTASGKQVSISESALQKVKGMLEEFDL-IRTECSLQDSPTCKQS----VSKVTPPPCVDK--RTPEYSVNFKRGNTCSEKFELSGNSNSKSGSSENQ-CIKVSPYISEFKENEQ-QLVLGTRVPLVE-NTCPLRKKRASPKNVKMETGKTEIFSS-PVRTNREVCF-AYSKDPEKYFETE-AVEIAKAFMEDGELTDS------EALNCDKRSRFTYQKS-EGMILLNSRIGKRR--------GDALVSVGEPPIKRNLLNEFDRIIENQDKS-LKASKSTPDGTMKDRRLFMHQISLEPITCGPF--RTTKERQEMQHPHVTVPGQEF---LSKSHFYEHLTLKKSSSSS---SVSEQPFSKV--PTTTNEKM---------RHSVTADKATKVFIPPFKTKSHFH-------RDEQCVSMDNNSEENKQNQKNIGE------HGSDDNENKINDSEIHEFNKNNSKL-AAAIIFAKYEEEP-L-DLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLP-RISLKTAVGSQIPSACSHKQLYMYGVSKHCIKINSKNAESFQFHAQDYFGKEDLWARKGIRLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISGVWVYNHYRWIIWKLAAMEFAFPKEFANRCLTPERVLLQLKY-RYDIEIDRCRRSAIKKIMERDDTAAKTLVLCVSDITSSNTDT-----SENSSSKT---SCVENK-KVAIIELTDGWYPIKAQLDPPLFALLKSGRLTVGQKIIVHGAELVGPPEACSPLEAPDSLMLKISANSTRPACWYTKLG--FFPDPRPFPLPLSSLFSDGGSVGCADVIIQRTYPIQWMEKTSSGFYIFRNEREEEKEAAKHAEVQQKKLEALFTKIQAEFEEH-EESTAKQCTPS--RALT--RQQIRALQDGAELYEAVKSALDPGCLE--SYFSEEQLKALNHHRQMLNDKKQAQIQLEFRKAMESAGQGDQGLSR-DVTAVWKLRIISYEKKEKD-SVI---LSIWRPSSDLYSLLTEGKRYRIYHLTTSKSKSKYERANIQLASTKKTQYQQLLASDEILLQVYQPREPLHFSRLLDPDFQPPYSEVDLMGFVVSVVKKIG-----------GCAPLVYLSDENHNLLAIKFWIDIN----EDIIKPHMLIAASNLQWRPE----SKSGIPTLFARDVSVFSASPKEGHFQETFNKMKNSVA-NIVMFCNEAEKKLMHILNVNIPKCSTPTKEYTSEPYAAQTM-----LGIGSK--FLMSSPVSDIIYPSPSSLCTP-KGKSIPTS-------VSAQMTSKSCCKGEKEADDPKTCKKRR-ALDFLGRLPLPPHVSPICTFVSP-AAQKAFQPPRSCG-TK----Y-ETPVKKKELSSPQ-MTPLKKFSET-SLLESDSIADEELALINTQALWSGSAGESQL--VSESTRTVPT-----------------GSKGNPGPKRPSATALN--KEREDHQAGTEECETT---RKD-------------------TRTVKSLS------------","is_aligned":1},"location":"GL018702:3042658-3113023","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSOCUP00000014514"}]},"branch_length":0.052681,"id":{"source":"EnsEMBL","accession":"ENSOCUG00000016878"},"taxonomy":{"scientific_name":"Oryctolagus 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princeps","id":9978}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Lagomorpha","id":9975}}],"confidence":{"value":12,"type":"boostrap"},"taxonomy":{"scientific_name":"Glires","id":314147}}],"confidence":{"value":5,"type":"boostrap"},"taxonomy":{"scientific_name":"Euarchontoglires","id":314146}}],"confidence":{"value":7,"type":"boostrap"},"taxonomy":{"scientific_name":"Eutheria","id":9347}},{"events":{"type":"speciation"},"branch_length":0.028358,"children":[{"exon_boundaries":{"boundaries":[28,89,95,122,165,192,209,248,271,310,511,514,750,2103,2492,2496,2543,2549,2653,2657,2664,2772,2805,2831,2847,2885,2901,3010,3072,3135,3193,3321,3375,3429,3472,3544,3599,3658,3749,3805,3447],"number_of_exons":42},"sequence":{"mol_seq":{"seq":"----MPVRAKKRPTFFEVFKMRCSKA-XXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXFREQGLTL---PR--HQ-SPLNESDNYRLDLGND--IAHSKHRSHCTVRAKMDQASDVTSPPLNSC---LSESP-VLRRTNVTPQRE----------K-SXXXXXXXXXXX--XXX-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRDEEAPETISFNDT--TDXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXLEKTLENSFDEVNSCEDHFGK---S------VPNVLED-DIRETVVDI--SEEDSFSFCVTKYKTENI-KEIKTGK--TRKKKLSKTVT---D--K-E-AKKEMHENKHSFASEMEPNNSDPLDSHVTTQ---K-PIGNGSDRISKEVVPPS-ASKQSQQTPSG-PNRTQIDKIPL----ICISACDQNNPKKDQIGTKRM--ANFISSENSLPHILSLPK-PEKILNEEIMINKRDGVQYLESHEECVLPVQPAIS---GSSPV-------ASPFQGIKKSIFRIRESPVETFST-VF--------SG--NMNDSNCKGELE-ASESGLELYAVFSQKESSLCPSSVDNESRPTPTKQTSV--TSKNAGLISTLKKKTKKFIYAVNDKTSCEREKVQKDQESELTNCST----HHEADAFEAPPTSTQAGP-GILHS-----SVKRNCLQYDHEKQTWSLTSSFGMTLRKCSNNESIFSNNKITAQDLDYKEGKNNKEELQSFIATEADHRSCLQGRHCEDDPKS-QRISDIKEKGLATACHPIIQPS-GEECSDI----HIQ------SQKSLLYDHKNACTFLLTLSSK----DPPSNPVMISREKESY-KMSGELEYKNCEANFEL-TK-------NIPTEKKQEIHVLNENSEE----AELLLPKKLVKVTSPSMKIQFNQNTDLTVIQKDQSNFKKTSLISKIM-ISANSEELFPENENDFACQITNKRNMTILENTK-ELNETDFRCVKEPVLKNSTTV--VYTDRGDEQAAQAFITNSLDSL-NVVPHLTEKDGNSVKQHLNMALG-----QGLKSYISLDI-EVKSNRNHDYLNRWA----------G---LLNPISSDNFGCGFRTASNKEIKLSEHNIQKSKMLFRDIEEQ-SANSLACIE-------------IVNTLS-------L--DNQKKLNKPCALDSQAANNVSVDVQSIAFVSDSENIKTTP--------------------QNLSLKQGF--------NSNYNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSHIMQNNK---FEVSE----KQMTVLNNTFEKWEDADPDLTIN--------APPITQIDSSKELERTVR-NKQKSAYLLKNNCNKSAS-GCLTDKNE----------------EFK------------GFYSALGT-KISISSESLQHALKLFSD-------IESISEK----T-SAEIDPRSFSSRKC--HDS-ISVLKTE---NC-NNDKHFNEK-----DDKSQLILQN--DIE-MTPGVFVEENTENYKRNSEN-E-ENKC--------------------------TGTD-RNPCHLGESDGNDSGEN-DTAYIRKDENGLPY-IDQHNIYLKISSQCMKEGNTE----IKEGLSDLTCL-EVVKAEETFNVNTSNKE-QLTANKMGQNGKDFDILYL--PFQTASGKNIRVSKESLNKVLNFFDENCTE-ELENFSASFNS--------ELLPGIK-NEMDISNLEESNLV--KNNIQKGSIPVGT-ENQLPVLQQQPECELEKIKEPTML-----GFHTASGKQVNITKESLDKVRNLFD-GKMQDNVTEITDCSHLGTETLKERKE--CKEGLELACETFEVTTLPKQEEMQNSLDDN--EKNLIYTET-TMLPRLLNDNLCRQTKILKTSNSISLK-VKVHKNRGKETAESPTACSTNQSTCSAIENSALAFYTGHGRKISVNQSSLYEAKKWLRK--GELEDQTGKI-------------SAVDCVENPSYENSLN-----------SIITGDDKN-HLFEKADSVYLSNSGMSNSCSH--HSYFCHSDEVYNKSGFLSKNKIDNSNIDPVVENVKDRK-NTSFSEVPSTLREANAYPQTGNEDTCIQKPVSAFSPQKSKN-----ATLKLAISDSDNFVVGP----------PAFSTASGKIVCVSHETIKKVRERFIE--NHGNV-IKQNTESKSDPCQTKIVAGCY-QALEDSEDVI-F-PSS--LEGKEGAMHSHKDFADIQSEQILKYNQNM---SGLEQVSKISSGQANLKTPDTCNF--NIGKLPKSPTSTNACGIFSTASGKFVQVSDASLQKASQVFSEI-------E-DSAKQFFSKVSFKINEEHSDKFT-EESTMTHQQQLLP--QKDFLYNVVKSSAY----SGFNTASGKQVLISESSLNKVKG--PEVSV-XXXXXXXXXXXXXXXX----XXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXX-XXXXFGK-QALPKN-KKEIGKPETFSNLPMKTNREVCS-TYSKDPENCFETE-AVEIAKAFMEDGELTDF------ELLSHAKHSLFTCQRN--ETVLLNPRIGRRR--------GNTLVSVXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XTTKEGQEIQNP-FTPPNQEF---VSKSHVFKHLTLEKSSSNL---SVSEKPFYKV--FATGNEKM---------XXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXX--X-XXXXXXXXXXXX--XXFITKLQNARDTQDMRIQKKQRQRICPQPGSLYLAKTSSLP-RISLKAAVGGKVPSTCSHKQLYMYGVSKHCIKINSKNAESFQFRAQDYYGKECLWAEQGIQLADGGWLVPSNDGKAGKEEFYRALCDTPGVDPKLISRSWVYNHYRWIIWKLAAMEFAFPKEFANRCLSPERVLLQLKY-RYDMEIDRSRRSAIKKIMERDDTAAKTLVLCVSEIISLSTNI-----SETSSSKA---SSVDTQ-KVANVELTDGWYAVRAQLDPPLMALIKNGRLAVGQKIIVHGAELVGPPDACSPLEAPESLMLKISTNSTRPACWYAKLG--FFPDPRPFPLRLSSLFSDGGNAGCVDVIIQRAYPTQWMEKTSCGLYIFRDERAEEKEAAKYAEAQQKKLEALFAKIQVEFEEQ-EENATKPCVPS--RALT--RQQVHALQDGAELYEAVRHAADPEHLE--SCFSEEQLRALNNHRQLLNDKKQAQMQLELRKAIESAEQGVQGLSR-DVTTVWKLRIISYERKQKD-SVI---LSIWRPSSDLYSLLTEGRRYRIYHLATSKSKSKSGRVNIQLTATKKTQYQQLPASDEILFQVYQPRKPLHFTKLLDPDFQPPCSEVDLIGFVVSVVKKI------------GHAPLVYLSDECHNLLAIKFWIDIN----EDIVKPSMLIAVSNLQWHPE----SKSAFPTLVAGDFSVFSANPREGHFQETFNKMKNTVE-NIDMFCCDAANKLMHILNANGPKWSTPAKDYTSEPYAAPAV-----LGTGKK--FLMSPPINETNHQSPLSLCKT-KGKSVPTP-------LSAQMTSKS-CKGEKEIDDSKNCKKRR-AFDFLSRLPPPPPVSPICTFVSP-AAQKAFQPPRSSG-TN----C-ETPTREKDLKSPQ-MTPSQKFSEI-SLLENDSIADEELALINTQTLLSGSAGENQLISISESTRTAPP-----------------SSKDCLGRKRRCVASVT--AEQ-SSQIGTEEGQAA---LQT-------------------TSTRKRSE------------","is_aligned":1},"location":"GeneScaffold_3963:155-56284","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSCHOP00000007822"}]},"branch_length":0.056264,"i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novemcinctus","id":9361}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Xenarthra","id":9348}}],"confidence":{"value":20,"type":"boostrap"},"taxonomy":{"scientific_name":"Eutheria","id":9347}},{"events":{"type":"speciation"},"branch_length":0.046725,"children":[{"events":{"type":"speciation"},"branch_length":0.018131,"children":[{"exon_boundaries":{"boundaries":[28,119,163,191,208,247,270,313,743,2285,2529,2766,2767,2800,2826,2828,2831,2880,3005,3067,3130,3188,3316,3370,3420,3467,3539,3594,3653,3744,3800,3827],"number_of_exons":33},"sequence":{"mol_seq":{"seq":"----MPVGFKERPTFFEIFKAQCSKA-DLGPVSLNWFEELSSEAPPYKSE---RAEEAEYKISSYGSNPFKTPQRKPY-YNQLASTPIIFKDQGITP---AL--Y-QSPLN-------ISGKD--IASSK-QSRFSVRAEMSQAKDVTSPPLNPC---LSESPV-LRCMHVTPQRE----------K-SVLCGSLFHTPK--LMK-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRDEEAPETVFPDDS---AISK----NHFSNHNKSLKKNDQFIPSVPDSENENQG-EVISRE----LGNFLGEVNSCEDHPEG---------GAPSALEE-EGHETVAHI--SEEDSFSLCVSKYKTGNL-QKVKTDK--TRKKYFNKTKA---GEC-EE-AKK-LEESRHLFAFEMEPNDSDPLGSSAPGE---E-PTGNIGHTVSKELVASS-ASEWPQLTLSG-LNGTQMERIP----LLP-TSCDQNNSEKDLIGTEEEC-ANFTTSENSLSRISRLPK-TEKLLNEERVVNKSEEEQSPLSHKDSILAVKQTAS---GTSPV-------ASLSQGITKSIFKIRESPDVAFGV-VF--------SD--NMTDSNLKEKP-EAPESGLEIGANCSQRWGSLCPSLVGNGSCPVTTKHASV--TLKNAGLISTLKKKTKKFIYSVNDKTSYPGEKMQKDQESEPTHCSA----QFEA-----PLTFLNSGS-GLLHS----S-VKKNSSQNDTEGPTLSLTSSFKTILRKSSNNES-SCNNKVISQDLDYKATEVNTEEPLSPVTTGPDCPSCLQESHGDGDPTG-QRASDVKRKVLAAAHRPAVRHS-EVELSGV----HF------QLQKSFLYDHHNASSLGLTPRSK----DPLSNSVVISRDKES-YKMSEELKHKNREATFEL-TK-------NIPLEKNQEMFVLNENSKK----AELSPPEKYMKVASHFVKVQFNQNIDVTVISKEQ---EETALISKIT-IDPNSKELFPENEDNCVFQMTNKRNTAILEDIK-GLPKASFGCVKEPVLKSPTMV--VYSDIGDERAAQLLLTEGDDSS-DVVRDLTEENRNREKQHLKMTLS-----QHVKSDVSLEV-DRKSSRNNSYVGRRA----------G---LLDPVSNYSFGGGFRTASDKEIKLSEHNIKKSKALFKDIEDQ-YPESLACVE-------------IVNPLS---------LDDQKKLNRPHALDWQTLKTASGDEWNSVFVSDNRSGRTAP--------------------QILSLKQDF--------NSNHNLTPSQKAEITELSTILEESGSQFEFTQFRK----PSRILENNT---CERSE----NQITVLNNSSEGWKDVARGVTT--------NAPPTSQVDNSKKWDGAVG-DKQKVAGLLKSNSDESA-SGCLTHKNKE---------------KFT------------GFCSALGT-KISVSGEALQSALKLFRD-------IEDVRED-----ASAEVDRGGSSRSQC---ASVVSVSELK---NF-NSDENLSEK-----HSKCHVILQN--NID-ITTGMFVEWNTDSCKRNTDE--ED-KC--------------------------TGTS-RNACNLGESNGNESSRN-DTVCIYEDENALPCMTDQHDVYLEVPRQFIKEGNNE----IKEGVSDLTCL-EVVKAEETFHVDSSDK--QSASNKMGQNVKNFDICDL--PIQAANRKNIRVSKESLNKVVSLFDKKYAEEELSNFSDSLSS--------ELLSDLN-NKMDSSSNEERNTV--KNKIWEGSNPVGT-ENKLLTVHRQPKCEIEKTREPTML-----GFHTASGKKVKIAKQSLDKVKNLFD-ENEQDNSSEVFSFPHQGAKTVKEIEE--CKEGLELACETVETTTFSKSEDMVNSLGDN--KRGVFSDET----MELVNDHLCSHTENLKTSSSVSSE-VEVHENVEKETAKSPTTCFRNRSTCSASENTALAFYTGRGRQISVSQTSLSEAKKWVRE--GELEDQPGKINAAKVACL---KEHPQGCVGNPSYGNSSD-----------SIITENDKN-HLSEKQDLSYLSNNCLHN-------SDLCHSDEVHNESGYLSKNKMDNGGIERVVKNVKDRK-STSVSEVTSTVRKANTNPQTGNEDICAQKLVTGTSPCKNEN-----VATEFVISDLNNFEVGP----------PVFSTASG-------ETIKRVSEIFAD--SSSKV-VQQNTESKSDADKTKPVADCS-AELDGPEGDA-F-PNP--LGGEECSMHSREALDDIHSAQILPHNQSM---SELDKVCEIRPCQVNLKTSDVCKL--NTGMLPKSLSSTNACGIFSTASGKSVQVSDASLQKTRQVFSEI--------EESTKYLFSKLSFKSN-EDSNKFTKEKNTVIHTKNKLL-------------PPQE----GFSS--------SVNALHKAKEMLEEFD-RITTECS-HHLPTSRQD----VSKTPPP--IGK--RIPKHPVNAKMEKTYYKEFRFSNNSNVENGSSETDHPIKASPHLCQSKQE----------VSLVE-NVHLLAKEQTLPRNIKMEISKIKTFSNLPVKTNMEVCS-TYSKDPENRFETE-AVEIARAFMEDGELTDS------EPPSHAKHPQLTCPKS-EEPAV---RIGKRR--------NALVSAAREPPIKRSLLNEFDRIVENQEKS-LQASKSTPDGTIKDRRLFMHRISLTPISCAP--ICSNKKKRGRMSASLGKEVRSL---VEVGGPDAAPTLHRLSSIT---HVTSFP--------PRDLKS---------EHSVTTGTPTKVFVPPFKTKSRAQ-------RNEQCAAGNVNLEENKQTQKSAVK------LGSGDSENNINEGGIHPFSKN----------------------LITNLQNARDRQDTRIKMKQRQRVCPQPGSLYLAKTSTVP-RLSLKMAVGGRAPSTCSPKQLYMYGVPEHCIKINSKTAESFRFHAQDYFGKEALWAGKGIQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWILWKLAAMEFSFPKEFANRCLTPERVLLQLKY-RYDVEVDRSRRSAIKKITERDDTAAKTLVLCVSAIISSNTNV-----HETSSSTT---SSVGSR-SVAILELTDGWYAIRAQLDAPLSVLLKKGRLAVGQKIITHGAELVGSPDACTPLEAPESLLLKISANSTRPACWYAKLG--FFPDPRPFSLPLSSLFSDGGHVGCVDVIIQRAYPIQWVEKTPSGLYIFRDERAEEKEAAKYAETQQKKLEALLAKIQAEFEEQ-EETAAKQCIPS--RALT--RQQIRALQDGAELYEAVKNAPDPGHLE--GYFSEEQLRALSNHRRVLNDKKQAQIQSEFRRAVGSAEPGGPGLS-RDVAAVWKLRVVTYEKKGKD-SVI---LSVWCPSSDLCSLLTEGRRYRIYHLATSKSKSKSERANIQLTATKKTQYQQLPASDEILLQVYQPREPLHFSKLLDPDFHPPCSEVDLIGFVVSVVKKP------------GFAPLVYLSDECHNLLAVKFWTDIN----EDIVKPPTLIAASNLQWRPE----SASGIPTLFAGDVSTFSASPKEGHFQEAFSRAKNAIE-NTDVFCNDAEDKLQHILTAHDPKWCTPNKDCTSEPHSAPAG-----LGADSK--FLLSFPNHEINYQSSLSL-HS-KGKSLSIP-------VSAQKTSKSCCKGEKDSDDQKTVRKRR-ALDFLSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-TK----H-ETPIKKAGWTSP-QMAPLRRASET-SVLESDSIPDEELALINTQALLSGSAG-----------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"scaffold_11:4649923-4713848","name":"BRCA2-202","id":[{"source":"EnsEMBL","accession":"ENSLAFP00000002234"}]},"branch_length":0.070258,"id":{"source":"EnsEMBL","accession":"ENSLAFG00000002670"},"taxonomy":{"scientific_name":"Loxodonta africana","id":9785}},{"exon_boundaries":{"boundaries":[28,95,121,126,127,129,166,193,209,211,249,272,311,515,517,732,752,1132,1199,1202,1282,1385,1386,1387,1443,1454,1455,1580,1588,1700,1705,2045,2048,2108,2574,2598,2610,2775,2808,2834,3012,3074,3137,3195,3323,3377,3431,3474,3546,3601,3660,3751,3810,3830,3834,3854,3857,3939,3961,3964,3375],"number_of_exons":62},"sequence":{"mol_seq":{"seq":"----MPVGFKERPTFFEIFKARCSKA-DLGPISLNWFEELSSKAPLYQSE---PAEESEYKVGSYEPNFFKTPQRKPC-YNQLASTPVIFKEQGVTL---PL--YW-SPLN--------LCRYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLQDTHVTPQRE-----------KSVVCGNLFHTPKL--AKGRQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIV-RDEEASETVFPYDST--PISK----NYFSKHKKSQKENDWRVSSVPENENKNQG-AVLSPESGEVPRGLFGDVNRCEGCGGS--------S-VPCGPGE-DTQETVADI-S-KADSVSLCITKYKTGNT-QKMKTGK--TRETIPKIAKA---GECE-D-VEKELEENRHSCAREMEASDSSLLDFHEPD---EET-AGSRSHTVSGGVVASS-ASPWSPLTPSG-LSGTQMEKRPS----LSM-SCSHSHLEKDLIGPE----NDLMTSESSLPHISGVPE-TEKRWPEERVASKSHKGQKLAPQKTSVPAVQQVA----------------AAASQSATEAVVGVRPLAGETCAVRSD------------DVTPSHFQEKP-EASNSGWEIEAACSQKDGSLCPSSVGDGSCSATPKHASV--ALKNVSLIATLRKKTKKFIYSISDKKSSPEGNTWRNPDSGPTQHSQ----------FEANCVFADADS-GLLRF-----SVQKNHLQNEGEEPARPLTSSLGTILRESSSNKS-SSTDKELSQGLYCKEARVNSEEVQSSGSTETHGQSCLQGHHGDKFPTT-QGASDVKEEAWAVSVHPVTQHS-EAEDSSV----CLD------SPRSSPCGRGGTASACPSPPDPR---GTMSGRLMIAREREP-CEMSEELSHKGCVTTFEL-IK-------NIPPEKNQEMCALNENCRE----GEWSLTQDYVTTASPSVKVWLGQNTDSTVVHANQ---EDTAFISKVT-VSPNLEEFFQENEENSAPQVMNERNMAALEGME-ELPEEHFRCVREPILKTTTRV--MCSDRGYKQAAHVLMTEVCDSS-AAICGLTEENRHGEEQRLTGTLX-----XXXXXXXXXXX-XXXXXXXXXXXXXXX----------X---XXXXXXXXXXXXXXXXXXXXXXXXFEHGIQKSKVLFRDIEDQ-YPRSLACAE-------------IVGVSL-------L--DSQQMLSRLDTLASKTPNPTSGEVWSKAFVSDSGSSHTAP--------------------QTLSLKQDF--------NSSRKLTPSEKAEITELSTILEESGSQFEFTQFRK------RSMQNT----LERSE----NQLTVLHDLSEDWKDVNLDLTTP--------GPSASQTGDSQRWVSTAA-TRQTAPNHVKQRA-----SGCPEHKE-----------------KFV------------GFCSAGGT-QVHGSSTTLQGALRLFSD-------TESLSED-----ASTGVASGRFSLSPS---ASVVSVSEIE---SS--NERSLNKK-----HDKCQLTLPN--SPD-TTAGMSVKGNPERGKRSRED-----Q--------------------------CAGPH-GNTRKLSETDGSDSAEK-APVCVCEGGTGLLW--DEPSVGLRASSQSTMAGNGD----ITEGLSDLTCL-EVVKPEETFHVDTSEK-EEPTCNKMEQSGKDLDLCDL--PVHTASRKAISISKESFSKVVNLFGTKYTEENSINLSDSVNS--------KLLSGISKNKKDCLRYKERNTV--QNKVWKEKNLTDT-ENKL-TVHPQAKHEMGKTGEPPML-----GFHTASGKKVTVTKASLDKVRNLFD-ENKQGSTSEISNFYHRGTKRLQERGE--HEEGLAVACEAVGTTPVPESGEVEDSLGDS--DRNCVSNET----LGFSRDCLCSHTENLRASNDSCVN-DEVHENTERETAECPVTCDQPSDRH-----QALEFYTGHGGRIGGCQTSLLEAGKWLRE--GELGDERGKRNAA-------------DCVGNPSRGGSSG-----------SITTENGNK-NLSEKQDLSYLSN-----SCSY--RSGFCHLDELHHKSWHLSKIKKDNSGIEPLVKDAQDRK-SSSICEVTSPVGNADTHPPTIKEDTCVQKCVADTSLCRNN------TATELTMSDSNSFAVGP----------PAFSVASGRVVSVSPETMNQVSRLFAD--TSSKV--VTHTDCKSDTYQAKAVGGCH-TALGDSEGNI-F-HNT--LDGEGCVSPSCKALGDIHSEQVLPHTQRM---SELDQVSKRPSCQVSLKTSDVCKS--YTEKLPKSI-STNTCGIFSTAGGKSVQVSDAALRKTRQVFSEM--------EDSAQQLVYTESCHSNKGHSNKVTKESKAVIHTKDKLPSPLAGFSSRAVNSSAS----SGFSTASGKRVLISENALQKVKGMLEEFD-VIMADCSYDSPTSED------VSKILH--CNDE--RVPKHCVSSKVQ-TCYRGFELSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXEPSIKRSLLSEFDRAVENQEKP-LQAAKSTPDXXXXXXXXXXXXXXXXXXXXXXX--XTTEKRQEIQNPNLTAPGREF---LPKSHCFERLALEKPSSSF---SISRQPQCQVP--APSTGKA---------SHLVTTGKPTKVFVPPLKTKSRFQ-------RSERCATRNVNSEENKHTPRSVVK------LGSGDSDNTVSEGRCHPLSKSSSSQAAAVTVTGAGDEPS---DLIAGLQSARGLQETRIKGKQQQHVCPQPGSLYLAKTSGLP-RLSLRTAVGGRAPAASSREQLYVHGVPEHCVKVNSRNAESFQFRAQDYFGKEASWAGKGVQLADGGWLIPSDDGKAGKEEFYRALCDTPGVDPKLISRDWVYNHYRWIIWKLAAMEFCFPEKFAYRCLSPERVLLQLKY-RYDIEIDRSSRSALKKIMERDDAAAKTLVLCVSAIVSSSTKA-----HEMPSGNC---SRVDSQ-PTAILELTDGWYAVRAQLDGPLSALVKAGRLTVGQKIITHGAELVGSQDACTPLEAPDCLMLKLSANSTRTARWHAKLG--FFRDPRPFSLPLSSLFGDGGGVGCVDVVVQRAYPLQWAEKTPSGLYVFRDERGEEKAAARHEESQREKLEALLARVQAEFEEQE-ENAAKQCTPS--RALT--RQQVCALRDGAELYKAVKDAPDPGCLE--DYFSDEQLRALRDHRQLLHEKKQAQVQLEFQKAVESAERGEQGLS-RAVSAVWRLRLVSYKSRERG-SVL---LSVWRPSADVSSLLAEGRRYRICHLAASESKRTSGSTRVQLTATRRTWYQQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XFAPLVYLVDETHRLLVVKFWTDLN----EGIIKPLALIAASNLQWRPEPNPGTEPGIPVLFAGDVAVFSGSPKEGHFQEAFNRMRSAIE-NTDVFCSDAENKLMHVLNTHGPSWSPPNEDWTSESCCAQAV-----LGAHSR--FPLSLTSHEIKYWN-YSLCP--KGKPLSTP-V------SAQKTWRS-CRGEEGGDDRRAIRKRR-ALDLLGRLPAPPPVSPACTFVSP-AAQRAFQPPRSRA-AR----H-EPPGKEQ-----E-MTLLKKEA---SLVESESIADEELALINTAL--QGCAGQCPGVPVGDPAGMAPP-----------------PSPGPLGPQRAAGPAA---GGQEQPQSSTG--------------------------------------------------","is_aligned":1},"location":"GeneScaffold_3650:343-54585","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSPCAP00000000440"}]},"branch_length":0.211116,"id":{"source":"EnsEMBL","accession":"ENSPCAG00000000379"},"taxonomy":{"scientific_name":"Procavia capensis","id":9813}}],"confidence":{"value":57,"type":"boostrap"},"taxonomy":{"scientific_name":"Afrotheria","id":311790}},{"exon_boundaries":{"boundaries":[28,107,113,125,165,192,209,248,271,310,731,734,750,930,933,1182,1442,1804,1806,2035,2052,2105,2155,2157,2309,2512,2586,2589,2773,2806,2832,3010,3072,3135,3193,3251,3321,3375,3429,3472,3544,3599,3658,3749,3781,3788,3809,3831,3984,3347],"number_of_exons":51},"sequence":{"mol_seq":{"seq":"----L-VGTKERPTFFEIFKARCSKA-DLGPISLNWFEELSLEAPPYRSE---PAEESEYKVSSYEPNHFKTPQRKP--YDPLASTPVIFKDQGIMP---WL--YQ-SPLKLYEFTIKE------TANSKQRSRLSKRARMDPAKDATSPPPNPC---LSGSP-LLRAAHVTPQRA-----------KSAVCGNLFHTPKL--LK-GQTPKRISESLGAEVDPDMSWSSSLATPPTLSSTVLIA-REQEVSELVFPNDAT--VASN----DCFSNHNESLKKNDWLIPSGSDAENKNQR-EVISYEFGETLGNLFGDVHSHQDHSGR--------A-VSNVIDE-EVQERVADI-S-EEDSFSLCVHKYKTGKL-QKLKTRK--TREKVLNKTKA---GDRE-E-AEPQLQGRKHLLSFGMEPSDSDPCDLAGLA---QEP-TGGTSEARSQELRASP-ALEWSQLMLSG-LNGTQMTKMLF----LPDPSFDQNDLGKDLIGTQKGC-VTLVTTENSPPHLSSLRN-TEAVLSEDPVLKESNEEKCVESNQDFILPAKPAVS---GTSPI-------TSPLQSTKKLVCKIRESPKETSGV-----------DSSGYMTDPSFKEKP-EASAGGLEADCHCSQREGLFCASSAANRSCPTSFRPASA--TLKGAGLISTLKQKTRKFVYSVSDETSYPEEQIQRDEDPEPPHCPA------QVGVHAAPGAHSDSLH-----S-----PVKRSNLQSRPEEPTLS--SCVGPILRKSSNHE--SSLNKIISQDLSDKEIELNTEELESFITTESDSLSCLQESYCEEDPKNDRRISDVREMVLAASHRP------AIECGSV----HLH------SQESFLHDH-NTSTLILTPSPK----EPVSNPAMISRKADN-----------IFEATFIL-TK-------NILVGKNQEISILNDNSQI----AQLSPPEKYLKVTSPSLKVQFDQNTNGMAIPKDQ---EEITFTSEVT-VCSNSEELFPENKDNFVFQTTSEKKNMAVLEDAKEHHETSVSCVKEPAPKHPTVV--AYSDMDAKQAVQVLAPQDSNSS-NISLNLSEEARKSKKQYLKMTLS-----QDLKTNLSLEL-ARKSSRNDD-VDSCV----------G---LSCPISNCDFGGGFRTASNKEIKLSEHHIKKSKALFKDIEEQ-YPKSLACVE-------------VAXXXX-------X--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------XXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXX-XXQKVACLLKNDCNKSTS-GYLNHKV-----------------EFT------------GFCSALGT-RINVSSEALQSVRSLFSA-------IEDTSED-----TSVEGDPQSFSPGKH----TSVPLSK-R---TYLNNDENV--------NMKCHIILQN--NME-ITTGIFIEGNTRDWKKNIEN---EEK--------------------------CTDAR-RNTYSSGKSDSDSSKAN--TPGIHKDENGSPSNVGQHNMYLKLSGQLIKEGNNE-----KEDLSDLTCL-EVVKTGEIVCVDTQTK-HQSTNTKMRQNVKDFDMCNV--PFQTASGKNIRVSKESLKKVANLFKTE----ESNTFSDLFDS--------ELPSGINTDKSDSENRKMV-----KNNIQKGSNPIGI-ENKLLVLHQQPKCGIEKTREPAML-----GFHTASGKKVKIAKESLDKVKCLFDAEKQDDDTSKIFSFHSQGTKTLKETRE--YTEGLQL--ETVEVTTLPKSEE-KNLLHDH--ERNFISNET----TGLLNEPFNRHTKSLKTSNSISLK-VEVHQNLEKETAKSPTMCAASENPAF--------ICTGRGRKISVSQASLFEAKKWLRE--GESEDQPVDISTA-------------DWVGNPPYGSSSN-----------PVITESDKK---------IYLSN------NSY--SSDFCHSNEVRNKSGSLS--KIDCSGIEPVMKNIRNRECTTSISEVTATAKKARTPPQTVNENVCVQKLRTD-APCTSEN-----AAIGFAMSGSSNFEVGP----------PAFSTASGKRVSISRKAIERAREILVD--NSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXX--XXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVSAA----AGFSTASAMQVLISESALYKVKGMLEEFD-LITAEYNPQSPPFISA-----ASNILPLPSVEN---IPKNTNSKEVRKTCKTEFQLLN---IERGSS---------------------ESPLETKASLVE-KSRPLGKEQTLLRQVKMKIDNAPTFSNIPMKKPVEVTS-ACSKDPEGYFETE-AVEIAKAFMEDDELTDL------ELPSHAKHSQFTCTEP-KETVVLNSRTGKRR---------NTLVSAGEPPTKRSLLNEFDRIAEKQEKS-RQASKSTPDXXXXXXXXXXXXXXXXXXXXXXX--XTTKEQPEIRTPSFTAPGQQF---LPRSHVLGHSALEKPSSSV---SVSGEPLHRAP--VSGRDGA---------RAAVSAGRPVKVFVPPFKTKAHFQ-------KKEQCAAGNVDVDENEHPQKNLAV------PGAGAS---MSGGGIHPLDQKDSSQA-AAVTFSTHEGEP-L-DVLASLQIARDAQEARIRMKQQQRVCPQPGSLYLAKTSSVP-RVSLRAAVEGRAPAACSPEQLYVCGVPTHCAQISSRNAAAFRFRAQDYFGKEA-WAGKGIQLADGGWLIPSNSGHAGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXT---RHADAR-GRAVLELTDGWYALRAQLDPPLSALLKTGRLAVGHKIITHGAELVGAQDACPPLEAPASLLLKXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XNTAKRCVPS--RALT--RQQVHSLQDGAELYEAVRTTPDPGHLE--GHLSDEQRRALSAHRQLLSNKRQAQVQLEFQRAVESVEAEVQDLS-RDVTTMWKLRVTNYQKKEKD-SVV---LSVWRPSSELFSMLTEGTRCRIFHLTVAAAKRKAGKGTVQLTATKKTQYQPLPASEEILSQVYQPREPLDFHRLLDPNFQPPCSEVDLMGFVVSVVKTT------------GLAPMVYVSDEHHNLLAIKFWVDLN----EDTIKPPILIAASNLQWRPE----SKLRIPTLFAGEFSTFSANPKESHFQEASHRMQAAVE-DASAWCGEAKQKLLLLLEARGPEWSTPSKGXXXXXXXXXXX-------XXXX--XXXXLPCAHGDCPNFLSLCS--KETSLPMP-V------SAQKTATSCGGVEDGGSDPKTARKRR-ALDFLSRLPAPPPVSPVCTSVSR-AAQKAFRPPRRCG-TA----HGARLGTRASASHQK-TTPLGKAKDT-LLVESDSIADEELALINTQALLCGPAG-NPLVCVSQSARTTPL-----------------WPEASPGLQQPGPMPEL----PGNASQRGTRQEPH---LQE-------------------TSGTKFME------------","is_aligned":1},"location":"GeneScaffold_4230:2259-131183","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSETEP00000003277"}]},"branch_length":0.207997,"id":{"source":"EnsEMBL","accession":"ENSETEG00000003989"},"taxonomy":{"scientific_name":"Echinops telfairi","id":9371}}],"confidence":{"value":57,"type":"boostrap"},"taxonomy":{"scientific_name":"Afrotheria","id":311790}}],"confidence":{"value":96,"type":"boostrap"},"taxonomy":{"scientific_name":"Eutheria","id":9347}},{"events":{"type":"speciation"},"branch_length":0.153668,"children":[{"events":{"type":"speciation"},"branch_length":0.013463,"children":[{"exon_boundaries":{"boundaries":[121,163,191,208,247,270,309,743,2766,2799,2825,3002,3065,3128,3186,3314,3368,3417,3463,3537,3592,3651,3742,3798],"number_of_exons":25},"sequence":{"mol_seq":{"seq":"----CFLT-------------------DLGPISLNWFEELTSEAPPHNYE---ISEDHGSKTEIIELNSFKTPQRKPFTYNQLASTPLIFKEQNVNF---SL--Y-SSPLRGPDHCKLDLGKDNAVDKELRKSHCLIKTKLGQANDATSPLLSAC---LSESPVVLRGTYRTPQRE----------K-PVAYGNLFYTPK--LMK-VNTSKHISESLGAEVDPDMSWTSSLATPPTLSSTVLI-VRDGQTSGARTPNDT--TIMLQ----KSLSQHGESPKRLDRTTSSVPNIENTHAESSVTSQELEKMINDSFGDGNSFEDLDGKMMKN------IPNVMED-EMCGPVIDT---PDDDASYSFPDYKIGSL-RKVKLDK---TRKKYFKMKT---NEC--E-ETERLNKDRYSNISETELEYCYPSISKVTKNEIQK-PIENINEELLKDDVPSS-ATEWSQLNLSG-LNVTQIEKTP----LPHLSFCDEDSRERS-ANSNSEC-SNLITLKKL-----------------EISTCEEDEGKITIPQKETVLLLKKSSP---EISPL-------KSLSQNRKSSTFEMGQTSEKTISV-DY---SSFCTVNTNITTESKILGNKLENPNSSVN-DIVCSGEHSFLYPNTDDKRHCPTITKCNSS--SLNSIGIISHFKKKTKKFIYVVNDDSSCQDENIQKSQEIDSMNCSESS--HLEMSSSGMHPEFTDAVS-DFLDS-----SVKRKCLQFNPEEETVSLTGCDKTVLEEYFNESS-FPQNEVTSQGVDFKEVKIKKGDLESTVT-------EAEKKDHNNASKN-PIVSNIKERALAKKYT-------EIELGNIGQNIHL------TTKNRTLNGSTNSIINTLTQLPQ----DPPEFSVVTDEEKEPLCKMKQKLRFRRNSDSTFV-TNKVNSEFPNSHFKKNQETDILNQISGE----SQQMSSEKCKEISSISLGTQVNRNTDLFVSLRDQ---EKTILLTGKTALETYPKEHLPLNKSNFLFQTTEKKHMQIMDSS--EELETNFCYLGEPISEKSTEI-------DCKQTVQELCTEDSFLL-KVIPEFTGDSQNK-NQSPKLAYEYTAPCKNLYSKRTIDANVKSKTNEDNYLGKWT-------------GNFDPDLNKNFGSGFKTASNKEIILSDNNINKGKLFFKDIEQH--DNNCSSVE-------------IMNTSVAENVKIDLDTKNHIKNSTS-GWNSEASHAISKDIQ----------------DNIFVINKKDT----NVTLENLALKKDL--------DLNHSLTASQKAEITELSTILEETGSQFEFTQFKK----QSPTIQI-----LEISTNKTGNQLDNLNTY-----DVQRTFELDGYFGAKNEISNSRTPDLNVNSEMVIN-IQQETASLSRQVNSTDT-----FTENEM---------------EFK------------GFCSALGR-KMTVSNEALQKALKLFSD-------IEEIGEE-----VPLQNFRNSSLERSH--KSNIVPTFKI---ANH-NNNEDFKGK-----EAKCVPKPQN--NIE-DYTDIFVEEKVVNSSRDPEN------------------------------------I-KSSCPLSISSHEDNCTF--KRSVPNSNNGLSL-NGQQNIHLKMSNQLMKQENYQ----IKEELLDLTCLGETVKDEEMFTLNISQVE-QLISNQKKQKIRENESLHDLQHFQTASGRNIMVSKESFNKVAHLFAKECSVEELNDFSFPSIS--------KMPNVAHNKLTEPSVKEEQNLL----ESETEEMPFGITKNQLLSIQQEPKIENKKCKDHSMV-----GFHTASGKKVTISKESLAKVKHFFV---EENLKNDVTNIKNIETEFFQEREK--ANDG--QACEMVELNNAQVWEEMPSYQNDD--KKILVPFTT-ADLSKKLDSALSNES-----SNDILFE-RKLSEN--KKSKENCLLSDTKKSTGLPVEISGLGFYTGHGKRISVSETSLLEARKWLRD--RDLQDVGGKTEAS-------------------------D-----------MFVSSVDEAIYLKGDPDVQKEKLVPLNALYKT--SSVEDDKNCISEEQDSVNLSNNV-SDIKHDLKHDPKRS----------------GFYQSDNADFFLEHISDKGMSYLKAR---------------------P----------PTFTTASGKTVHISNEAVQKAREMFIN--DCDKV-LKPNIETKLENNEMEVVKYFS-ETLGNKKDI------SLKFDAKKRNISTTDIFISNTKCSNLAQLESMSTSTGLEVNSELSHHKINSQTSDLSK---SMGRMPK---CSSSVGIFCTANGKPVQVSDNSLKKARQVFSEI-E-------SNSEQLLSMVPFKNSESHMETLTKEENTTLHAKTNLLSQKKDYLSDMVNSHNN----SGFSTASGKQVLISENALKKVKNMLVEFD-LMKNESLEQLPEFTQNV----TPKVLSPIHCIDGSKNPENVVNSKNEETCNKEFNLSNNCDVETNYLENCTITKVS--CNQFKQDEM-QTPLETNLMPDQ-DFSFLKKKQGGPKNVNIE--GDVTLNDFLVKESLQVCV-SDSKAPENFLERE-AMEIANAFMQDDELTDS------ELPHNARQNFITYKNK-EKCMQLNSRFGKRR--------MEKGASYGEPPIKRKLLHEFDRVVENQEKS-LKPSKSSPDGTMKDRRMFMHHIPLKPLICDP--FSTTKERQEMRHPNFTAPDQGF---TSKSPFFKRQTLGNSSYKS----FLGSPLYKI--FSTNDGKI---------QPNTVVNKPSKVFVPPFKTKSNSF-------TDEQYVSKRLKLKVKDHIQENEKQK-----YIDGHNTRDSENNENYLTDKDNYNQ-ATTDVFEEFGDST-LVEMNKNLQNARELQDMRIKKKQTQQIYPQAGSLYLTKTSTIP-RISLKVAVEGRVPSTYSSKQLYMYGVSKQCSRINSKNAESFQFHSQDYFSKEYLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPERVLLQLKY-RYDIEIDKSRRSAIKKIMERDETAAKTLVLCVSEIISSGTNM-----SIAANNKN---SKVDTKKESAVIEVTDGWYAIKALLDIPLLALLHRGKLTVGQKIITHGAELIGSQEACTPFEAPPSLMLKLSANSTRPACWYTKLG--FFSDPRPFPLPLSSLFSEGGSVGCVDIVVQRVYPTQWMEKTLSGLYIFRNERAEEKEALKHAECQQKKLEALLTKIQAEFEKHEEENSATQHGLS--RILT--RQQVRALQDGADLYEAVKNAPDPAYIESQGCFSKEQLRALNNHRQMLNDKKQAQLQSEFRKAVAAAEMEEQGLSKRDVTMVWKLRVINYGKQEKD-SVI---LSIWRPLSDIYSLLKEGNRYRIYHLAASPSKSKSDSTHIRLTATKKTQYQQLPVSHETLFQVYQPREALPLSKLVDPSFQPSFAEVDIVGFVIFITKKP------------GIAPLVYLSDEYYNVLAIKFWIDLN----EDVIKLNTLIAASNLQWRTE----SRSGIPTLFAGEFSSFSASPKESHFQEAFSKLKSSVE-NIDLFCNDAESKLTHLHNIHNSKQPNTVKEYNLDSPSPQ-------AKLGLE--HVITTSHSEPSHLCP-------EGNSGLTT-------SSDKITPTSDCRGNRKMDDPKICKKRR-SLDFFSRLPLPPPISPICTFVSP-AAQKAFQPPRSCG-NN----YSSKPNKKNTLNSP-PMTTLKTLSGT-NMVENDLIADEELALINTQALLSNSSE-----------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"GL849705.1:683545-750243","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSSHAP00000012162"}]},"branch_length":0.090154,"id":{"source":"EnsEMBL","accession":"ENSSHAG00000010421"},"taxonomy":{"scientific_name":"Sarcophilus harrisii","id":9305}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,743,2766,2799,2825,3003,3065,3128,3186,3314,3368,3418,3465,3537,3592,3651,3742,3798],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MSAGYQGKTTFFEVFKTRCSES-DLGPISLNWFEELTSEAPPYNYE---ISEDPGSKTEITEVNYFKTPQRKPFTYNQLASTPLIFKEQNVNC---SL--N-SSPLSGPDHCKLDLGKDTAMDKELRKSHCVLKTKLGQANDVTSPPLSTC---LSESPAVLRGAYRTPQRE----------K-PVAYGNLLYTPK--LMK-VNTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLI-VRDGQTPGARTPDDT--TIMLQ----KYLSQHGERPKRLDRSTSSVPNIENIHAEGYGTSQELEKMIDDSFDDGNNFKDHGGKMIN-------MPNIMEE-EICDPIINT--PVEDDASFNFTGYIVGNL-RKVKCDK---TRKKYSKTKT---NEY-ED-TKNLSKKENYSSASETELEYCYPLISKAENNEIQK-SIKNVNEEMLEDDVPSS-ATQWSQLNLSG-LDVTQIEKTP----LPHISFCVQNSEERP-ANESNEC-SSLSTLKTV-----------------EIAAYKEDEEKITTPNKGSVMLLKQISP---EISPP-------NAISQDRKNSKFKMRQTSEETVSM-DFLECSSLCTVNASITTEAKVFENKLENPKSSLD-DIICPEKHGLLSPNTDGKGSCATVSKRNSA--PLNSTGIISHFKKRTKKFIYVVNNDSSYQGEKIQKTQEFGSVNCSASS--HLELNSFEEHHEFTNAIS-DFLDS-----SIRRKCSQFDPKEETAPLTECDKTMMEEYFHESR-FPHNEVTSQDLGFREVEMNKGELESDITE-TDNQSQSQERSYNDFSKR-QRDSHVKECILTATCLSPRKHT-EIELGNIAENSHF------TTKNSTLHDSVDTSINSLTQLPQ----DPQELSVVIYGKKEPLCKVKQKLRFRRNSDSTFITNKVRSELKESFGNKGNQETEVLNEILGD----DRELSSEKCKEMTSVSLGAQVNKNAGLFVSLRDQ---ENTNLITEKTAIELYSEEDLHFNEENFIFQTIDKKNIRVTDSSE-EFFATSFCYLEESIPKNSTEI-------DYKQTVQELFMEDSFSS-EMVPVFTRDSQDK-NQNSKLACECISQSKSSYSKSTIDTNMKPKRNEENYLGKWA-------------QNFDPDSNKSFGCGFKTASNKEIILSEHNIKKGKLFFKDIEQYYNSSSVEVVN-------------SSISVAAENIKTDSDSKKQEKNSFP-AWKSEPSHIISKDVQ----------------SNIFVLNEKEI----DPALEDLCSEKDL--------DLNHSLTASQKAEITELSTILEETGSQFEFTQFRK----QSSTVQTLD---ISTNKADELGNLNTFELQMGVELGDHFGAEYETD-----NNRSPVQVDLNVNSEVVIN-VKQRTVYLPKSNSEQGASTDIFTES------------------EFK------------GFCSALGR-KMNVSNEALQKAMKLFSD-------IEEIGEG-----TPLQNLRNGPLDRSQ--KSNIVPAFKI---ANYANNSKDFKGK-----DAKPQSNAEN--N-----TGIFVEENMLNCSRDPEN-KQ------------------------------SSSP-LFISSHKDSSKLKGSVEPDSDNSQREKNDLSS-IDQQN-YPKMSIQLIRQENYP----VKGGLLDLNCLGKAVKDEKIFASNVSGIE-ELVSNQEEQKMRENENSSHLQSFQTASGRNIMVSKDSFSKVAHLFAEECSVKELNDFSFPFTL--------KMLNTALNKSVESSGKKSENLA--ENEIEEMAVAT---KKELMPIQKGPKIENKKWKEYNMV-----GFHTASGKEVTISKESLTKVKHFFV---EESLENDVTNIKNLETEFLNEREK--INEKLVQAYEMVKLNNSQVCEEMQSFQDND---EKVLPVRT-TDLPKITDSILSNEP----------SN-NVLFEEKLSEIKENCILSDAKQSTGLPVEMSGLGFYTGHGKSVPVSETSLLEARKWLKE----IDLGGKTKASGMFVSSVDVKEDSDIHVKKSVPLYTSN-----------NTSSIDDKN--ISDKQDAVFLSNS--------------------------------M-SSIKHNLKHDTEGS----------------DFCHSDDADFFSEHISDKVMSCLKAQ---------------------P----------PAFTTASGKTVHISNEAVQKAREMFIN--NGDKF-LKPNIENKSENNQMKNVKDPS-KILENKDIS------PKSFDGKKRNLSVNEGSFSNKIYSKKAQLENISAGIALEMDSEVSHCQINSKTSDLYKS--TIGKQPK---GSSSVGIFCTANGKPVQVSDNSLKKARQVFSEI-A-------NDSEQLLS---IKGSENHPETLIGEENAMLYAKINLP-AQKDYLSNMQNLYNN----SGFNTASGKQVLISESALQKVKGMLVEFD-LMRNECLESIQDVTPKG-------LSPVLCIEG-SETPKHIVNSKSKEICNKELHFSNNCNVEISSSENSRIIEVS--CAQFKQDMI-HPLLETKLTPAK-EILFLKKGQVGLKDVDME--SSEAIDGLPVKRNLQVSS-PNSKAQETSMERE-AVEIAKAFMQDDEFTDS------ELPHNAKQSFFTYKNN-EERILTNSRFGKRR--------MEERASYGEPPIKRKLLYEFDRAVENQAKS-LKPSKSSPDGTMKDRRKLMHHISLKPVTCDP--FSTAKEWRQMRYPNFTAPGQEL---TSKYHFLKHQTLENSSHNL----LLQSPSYKD--SSTDNGKV---------KSISVRGKPAKVFVPPFKTNSNSS-----TATDDEFIRKRLKVKVKEYTPENEKQK-----YGDAHNSGDSENNENYLSDKDNSNQ-ATTDIFKECGNLH-L-EMIENLQHAREMQDMRIKKKQTQKIHPQAGSLYLRKTSTLP-RSSLRVVVEGKVPSTYSSKQLYMYGITKQCLRINSKNSESFKFHSEDYFSKEHLLDGNGIQLADGGWLIPTDEGKLGKEEFYRALCDTPGVDPKLITKTWVYNHYRWIIWKLAAMEFTFPKEFASRCLTPEWVLLQLKY-RYDIEIDESRRSAIKKIMERDETPAKTLVLCVSEIISSGTNI-----SITANSKN---NSVETKKESAVIEVTDGWYAIKALLDSSLLAILQKGKLTTGQKIITHGAELIGSQEACTPLEAPESLMLKLSANSTRPARWYAKLG--FFSDPRPFPLPLSSLFSEGGNVGCVDIVVQRVYPTQWMEKTLSGSYIFRNERAEEKEALKYAECQQKKLEALLTKIQAEFEKH-EENSATQHRQS--HILT--RQQVRALQDGADLYEAVKNAPDPAYVE--GCFSKEQLRTLNHHRQILNDKKQEQLQAEFRKAIAAAELEEHGLAKRDVTTVWKLRVVNYKKHEKD-SVI---LSIWRPLSDIYALLKEGNRYRIYNLATSPSKSKSDRAHIRLTATKKTQYQQLPVSHEALSQVYQPREAVPLDKLMEPSFRPLCAEVDVVGVVISVTKKP------------GVAPLVYLSDEYYNLLAVKFWIDLN----EDVIKLHTLIAASNLQWKTE----SRAGIPMLFAGEFSVFSASPKQSHFQERFNKLKNSVE-NIDLFCDGAEKKLSHLLDTHNSKQPNAVREYNLDSPQAK-------LGLG----PMISPFHRERNHHCP-------EGNSGATI-------SSVKISPTSDCRGDRKMDDPKICKKRR-SLDFLSRLPLPPPISPIRTFVSP-AAQKAFQPPRSCG-NK----Y-NVPVKKNTSNSP-QMT-IKTLSGT-TMAENDLIADEELALINTQALLPNSSE-----------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"4:304116271-304197558","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSMODP00000033276"}]},"branch_length":0.094626,"id":{"source":"EnsEMBL","accession":"ENSMODG00000009516"},"taxonomy":{"scientific_name":"Monodelphis domestica","id":13616}}],"confidence":{"value":97,"type":"boostrap"},"taxonomy":{"scientific_name":"Marsupialia","id":9263}},{"exon_boundaries":{"boundaries":[129,130,131,162,190,207,246,265,308,413,415,416,429,431,499,505,1389,1391,1395,1421,1425,1435,1436,1548,1551,1589,1593,1663,1664,1691,1693,1751,1754,1756,1828,1834,1837,1838,1839,2008,2011,2031,2039,2082,2102,2103,2104,2163,2775,2802,2807,2809,2835,3013,3075,3138,3196,3242,3326,3378,3398,3425,3426,3432,3473,3547,3602,3661,3752,3815,3989,3990,3991,3992,4016,3070],"number_of_exons":77},"sequence":{"mol_seq":{"seq":"------------------------------------------------------------------------------------------------------------------------------KDNSQKSRYIMKTKLGQANDVTSPPFSAC---LSESPVVLRGPYRTPQRE-----------KPVAYGNLFYTPKL--MK-VNTSKHISESLGAEVDPEMSWSSSLATPPTLSSTVLI-VRDGQTSEARIPNDTT--IXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXLEKMIDDSFGDGNNFEDHDGKMMR-----N-MPNVMED-EVCDPDIDI-P-IEDDALFSFPGYKVGSL-RKVKLDK---TRKKYFKIKT---NEC------EETKNMKDKYSSTSEAELTDPSISDITKNEIQTH-VENVNEELLKDDVPCL-ATQWSQLNLSD-LDVTQIEKTPL----PHTSFCDQIQEKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XX-------XXXXXX-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXX----------X---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXX-------X--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTL--------------------DDLSSKKDL--------NLSHSLTASQKAEITELSTILEETGSQFEFTQFQK----QNPIVQT-----LEISE----SQMSSLNTY-EVQNTVELDVIL-----------EKNEIDNNR-FEVVIN-VKQKTVGLPKSNSGQVIFTDSFTENKV----------------EFK------------GFCSALGR-KMNISNEALQKAMKLFSD-------IEEISKE-------TSAFKNDSLDRNH--KSNVVPTFKIA---KY---NNKILNK-----DVKYVHKPQN--NVE--NNTDILEENTLNCSREPENKK-E-----------------------------CTSSHKDNGKLKESIVPNSDNT------QREINGLSL-IGQQNMHLRKSNQFIKQENYQ----IKEEFLDLTCLGEAVKDKEVYLYK-----EQLVSNQKEPKIRENENSCDLQHFQTANGKNIMVSKESFNKVTHLFAEECSVKELSNFSFDFES--------------NVLTMEPSGKKEKNLV----ESETEEMTLGATKSQLISIQQGPKIENKKLKEHGMV-----GFHTASGKKVIISKESLAKVKHFFV---EENLENDVTSIKNLETELFKEREK--VNEKHGQAYEMVKSNNAQVWEEMQSYQGDN--GKVLISVTT-ADLPKITDYSP------LKPSNSVLFE-EKLSENKE---AKKIVYCHTKQSTGLPVEVSALGFYTGHGKSVFLSETSLLAARKCIRE---RFKSEKADSDVD---------------AKKLVPLNTSN-----------DTSSVEDKN-CISDKQDSANLNNSMSNXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXX-XXXXXXXXXXXXXX--------XXXXXXXXXPPMKRKLLHEFDRVVENQEKS---LPSKSSDGTMKDRRMFMHHISLKPVTCDPF--XXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXX---XXXXXXXXXXX--XXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXLYMYGVSKQCLRINSKNSESFKFHSQDYFSKEYLLDGKGIQLADGGWLIPSDKGKLGKEEFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNT-----STTANSKN---SNVDTKRESAVIEVTDGWYAVKALLDIPLSVLLHRGKLTVGQKIITHGAELIGSQEACPPLEAPASLMLKLSANSTRPARWYAKLG--FFSDPRPFPLPLSSLFGEGGNVGCVDVVVQRVYPTQWMEKTASGLYIFRNERAEE-EALKHAECQQKKLEVLLTKVQ-QFKH-E-ENSARQYGLS--RILT--RHQVRALQDGADLYEAVKNAPDPAYIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XVAPLVYLSDEYYNLLAVKFWIDLN----EDIIKLHTLIAASNLQWKAE----SRSGIPTLFAGEFSSFSASPKESHFQEIFNKLKSSVE-NINQFCNDAESKLIHLINTYNSKQPNAVKEYNLDSPSPQAR-------LGLV--RVISTSHSEPSHHCP-------EGDSGLIT-S------SVKITPTSDCKGDRKMDDARICKKRR-SLDFFSRLPLPPPVSPICTFVSP-AAQKAFQPPRSCG-NN----Y-SKPIKKSTLNSSQ-VTTLKTFSGT-NMVENDLIADEELALINTQALLSNSPEK--LI-MDGFTSREPS-----------------GSGEHWVLKKDCPKLIEVENISQTSTEETRITRDK---NEI---------------------------------------","is_aligned":1},"location":"GeneScaffold_5009:8209-57002","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSMEUP00000009812"}]},"branch_length":0.084492,"id":{"source":"EnsEMBL","accession":"ENSMEUG00000010691"},"taxonomy":{"scientific_name":"Macropus eugenii","id":9315}}],"confidence":{"value":97,"type":"boostrap"},"taxonomy":{"scientific_name":"Marsupialia","id":9263}}],"confidence":{"value":99,"type":"boostrap"},"taxonomy":{"scientific_name":"Theria","id":32525}},{"events":{"type":"duplication"},"branch_length":0.312549,"children":[{"exon_boundaries":{"boundaries":[27,121,163,191,208,247,271,309,745,1000,1250,2158,2348,2767,2800,2826,3003,3066,3129,3187,3315,3369,3419,3466,3538,3593,3652,3743,3816],"number_of_exons":30},"sequence":{"mol_seq":{"seq":"----MPVEPKERPTFFEIFKARCSNSGDLGPISLNWFEELSLEAPPYNST---TSEDPECKTRSCEPNVFKTPQRKPSTYSQLASTPVIFKNQNVTL---PA--D-PSPMKGLDQCSIDPRKDDADNKDSQRSHSMTGTKLQQVNDVPSPFSSF----LSESPTVLQRLFTTPQKN----------K-PVICGSLFCTPK--LTG-FQTPRPISESLGVEVDPDMSWSSSLATPPTLSSTVLL-AKDDQVSEAKFADGN--TIVSKHKMLQKFLGHGESLRRNGMNTSSGTNVNSET---GIMDHELEKILDGSFDDVNSCEDRIEHDSESAWNRS-EPQNLED-EVYEAAKDVLPGEGDAHSINYASCKTKED-----------EGKHFNQIRA---AEC-KD-TEHLVENAECAVAHDTE------FTSSVAKNKVQQ-PLESVNDRSSKEEVTSQ-ASEWSQLNLSG-FDGTWMEKTP----PAHISSLAERLAAKA---------GGHAASDISLPSTLSPDR-AQKVLNIDPLVNTRDDKQCSQPHQDCVLMLKDTTP---ETFPV-------ASPFQSNRNLMLQKKQDSEKTSEE-DF-LKSNFLGTNPTDFKDPETPDTRLESHSSLRKDGSRCPPRPDPLAVDSDGNESWPTSDYNPVI---WKSTGIISNLKKKTRRFIYAVNSDSSFQEGKTPEHQGSGSPHSSTSSCLEWKSSV--DPQTYSRIDP-GILFTDLLGASARKECLLPEAHGQILSSPSKVMCGI-DCPPPENSFSRSTIVCRELEYNEAKTN-DEPHSATSFEACDGSEFQQSHFNDPSKR-QRVASIKDKAKAAAGLLARKHS-EVEFGKI----EHTV----HSPEANRTSDVNPSTLGLTPSSKD---PPLQSSDIIPRAKESFCK-------KNLESEFRK-NH-------KVSCVENKASPQLNDIAAN----NSTGKETEHQTGFSVRILQQAQQRLSDKFTESLR---DCQEAISEVTAVKPNYGLNKPLHKDTFLYKALAS-DTDVMDNTG-EICESSYSYLEEPVSESNTSA--IYAEMEHKEETQELITQNSFSS-KEAPEHFQKGSCSLNQALKMSGEVTLPNKDLNCRNSSSLVLKSKGNNGGNPKKWT----------R---TFEHVLNQSVGCGFQTASNKEIKLSENNLKRSKMLFKDIEEQ-YPNSIFYAE-------------SANTSTTV-------QEKKLNQNSSRAFDSKPSSTKPNDFLDNISVVNSENTILPL--------------------QPLCIQPDL--------ELKHCLTASQKAEITELSTILEETGSQFEFTQFKH----QGSTVESNV---IALGKNDE-DELVNSNNTSDELKGVTFDDSFIPRVRGG-NGKFPKQVETSVSSEDKVN-IKQQTLYFQKSNSDRNTFADVLGIKEN----------------EFR------------GFHSALGR-KMVVSDVALQKAAKLFSD-------IEEMSDE-----ATSSEAKSKICSSES--HISIVSAFETA---ND-KNDKDIEEK-----GTKSLYKSPT--NVE----NIVSVAKTENWGENMQN-KERND--------------------------FPFQRPPEISNLRKSTDCNRSEG--KYCVHKEGSGVSS-IDQHNAVLNMSNQFLNQENTQ----ADEGLSDLTCL-EAVKAEEMSSLNISDKVRDVTCNPEWKQMEGTLSSREPQSFQTARGKKILVSTESLKKAHLLFREECPEEESDVFLFPLH---------QMENRVTNEKMEKYVKEKITTK--QSKTPEEAIPGAP-ENQVMTFQREPNLESERLGEHSIM-----DFKTASGKNVKISKESLAKVKDIFA-EENPTGKQKMSTLQHPETGTSRKREN--IPEGFAHTSEALGF-PGRIGEEMPDCEDDSNIEKNLFSQNKEELPELLTERGLCNQTIALKTPSTVPLE-VKVSGDMEKGTEKNCSASYPELFIGKAKTASALEFCTGHGERISVSEASLFKARKWLSE--GDLEGAPRKTDASESMLFSSAADKNMHFKVSPSKNILTL-----------KMNRTDSHERQGSVYPMDGYISKASFSNSKEY--AANICNDSVVVN----YTAGRKGSTDSQLAFHNLTDAN---------------KKYSPVMNEDTNVQSLPDPSEMCSAQNVINIKTSTGKTEFRSTHFELKP----------ATFSPA--KTIPISPEAVIKPKEISPT--TSN---VRLNIGTESEICPTEIVAGNI-RTFGSPENIT--FPHL--PDNAAMYIDTAKKEENIADKQALKKTQSLFANTSFEVDLQKSHCQANFRTYDFCQA--ELGKLPPLGALTRMSQAFNTASGKPVRVSDASLKKAKQVFSAI--------ENHSERLPFVTSFKDTESHPEKVMDESNPNRSEKPQVL------------QKHS----SGFRTGSGKQVRISESALERAKGVLMEFD-ELDKDDNVAYFSKPNQD----VLKASAFHSRVDGDQAEGCILSFPTEKDLSKKLNYS-NYYVERKSSEDSRHIQVSRNRD-----E---QLSLVETGQCDNGIAIFKSENLL------KIDDGSTLSSRPVQARIDVFP-PCSKATESALET-EAASSTKAFMED-ELMGL------GVARPVKQSLFTYPND-EGCIMLHPRTGKRR--------FEEHDSHGEPSIKRKLLPEFDKTMGKEKSS-LKASRSTPEGTMKDRRMCTNHVPLKPVSCGP--FSLTKERQEMRNPNLTAPNQEF---LSKPNAFQHHTLGRSSSNS---PVFRAPFYGV--SANKNEKM---------NPQNISGKPAKVFVPPFKTKAHAC-------TDKQDVSKKCQLQMNKQVNKDGEQKSSLSRHDPGVSGSNTVDAKNDQSHTDSANQETIQAVAEHGEEHSV--DTITNLQRARELQEMRIEKKQRQRILPQMGRLYLAKTSGHP-RLSLKTAVEGRAPSKYSTKELYMCGVSKHCLRVNSKNAESFQFCSQDCFSRECWSAGNGVQLADGGWLIPTNAGKAGKEEFYRALCDTPGVDSKLISRPWVFNHYRWIIWKLAAMEVTFPKQFANRCLTPERVLLQLKY-RYDVEIDKSQRSAIKKITERDDSAAKTLVLCISEIISPSTSA-----AATASKTN---NSVLTQKEGAVIHVTDGWYSLRALLDPPLLVLLQAGKLMVGQKIVLFGAELVGPSNACTPLEAPEDLMLKISANSTRPARWYAKLG--FQPDPRPFPLSLSSLFKDGGNVGCVDVVIQRAYPTQWMEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQ-EDAARRQDVKS--RVLT--RKQVRALQDGAELYEAVKSVPDPAYIE--AYFSKEQLKALSSHRQMLSDQKQAQIEMEFRKALELAEEGEEGWARRDVTAIWKLRVVDYRKPGKD-AAM---LNIWRPLSDMYSLLKEGSRYRIYHTAPSQSKSRSGRASVQLTATKKTQYQLLPASHEILFRIYRPREVLQFGKLLDPALWPPWTEMDLVGFVISVTKRA------------GLAPLVYLSDECHNLLAIKFWTDLN----EDIVKPHALIAASNLQWKSE----TTSGICTLCAGELSAISANPKEIHFQETFNKLKSTIQ-DVIQFCSHAENKLRNVLLLSDPSWSHRAADGSLEPPTPH----------GRF--DLVSLPQLQVTVTYSFIQMPP-KSEAGPSPAAAASALGSGTLTPQPGWRGAAGPAAPKTCKKRK-ALEYLSRIPSPPPVSPLCASVSP-ALKKAFQPPRCCG-IR----P-STPVQR-------PSSPREGSAQSPPPLEGDLVTDEELASINTQALLAGLAEDNTVTAGPPGLKADAP-----------------DSPLEKGRLSPNCSAGADLAGNHADEARGMATSQQKLRR-----------------------------------------","is_aligned":1},"location":"Ultra336:825655-866744","id":[{"source":"EnsEMBL","accession":"ENSOANP00000024376"}]},"branch_length":0.001496,"id":{"source":"EnsEMBL","accession":"ENSOANG00000015481"},"taxonomy":{"scientific_name":"Ornithorhynchus anatinus","id":9258}},{"exon_boundaries":{"boundaries":[3412],"number_of_exons":2},"sequence":{"mol_seq":{"seq":"---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEKTHTGSYVFRNERAEEKEASKHAESQQKKLEALYAKIQDDFEKQ-EDAARRQDVKS--RVLT--RKQVRALQDGAELYEAVKSVPDPAYIE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSGSIR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------","is_aligned":1},"location":"Contig35657:828-3008","id":[{"source":"EnsEMBL","accession":"ENSOANP00000032170"}]},"branch_length":0.03709,"id":{"source":"EnsEMBL","accession":"ENSOANG00000030391"},"taxonomy":{"scientific_name":"Ornithorhynchus anatinus","id":9258}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Ornithorhynchus anatinus","id":9258}}],"confidence":{"value":97,"type":"boostrap"},"taxonomy":{"scientific_name":"Mammalia","id":40674}},{"events":{"type":"speciation"},"branch_length":0.093092,"children":[{"events":{"type":"speciation"},"branch_length":0.04276,"children":[{"events":{"type":"speciation"},"branch_length":0.286426,"children":[{"events":{"type":"speciation"},"branch_length":0.027937,"children":[{"events":{"type":"speciation"},"branch_length":0.071496,"children":[{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,310,742,2766,2799,2825,3000,3065,3128,3186,3314,3368,3418,3465,3536,3592,3651,3742,3799],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MAYKSGKRPTFFEVFKAHCSDS-DLGPVSLDWFEELSSEAPPYEPK---LLGEPEGPIGWFDQT-FKTPKAKSSTDSQLASTPLIFKEQNTMP---PF----SSPGKELDQKKMETSRE------NLLSPSMAGRKTDQENQILASPHGICHNYTAASPAIVRNPCRTPQGS----------NIPGPYGSLFCTPK--FLE-IPTPKRISESLGAEVDPEMSWTSSLATPPTLGVTVII-ARENDSISGAKQQDERAEIVLH----NFLSEDDGYTAKNDTSLLSIPETVKLNAR-DDIKDLESEVLDGLFGETNSFEDSFNLPAESSGI-LLSPRALDAIEKCEIKIDE-AQEKSDVLSEQHRRRKSTISQEVKAANWT-EKSCCVEVKD---SIIQNT-NEDIMDSKDNCLLGREKELEYLRIAGNLQD---NRTQKSSVNEKLVKDVLSSS--SQWSQLNLSG-LDVTHLEMSICS--SPQSDSCREKGLEEKSVLMTKDD-----AVETSLLNTSGLRN-AQELSSASLSENGSDTKISKNNPMSEITPVKPVCA---SPKLVKGYAHEEVSGMSFLNCSSFLIESTNVMEYSV-VY-----------NSTFSTHLKATSQSVVTDVLSHPLICSAASPDNCSDLHLRNSEKTLRKS-----NFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPDNPVLTHLESDLHEFKDCQVATDGNQDCLLSA----------ERQSNIKENNLNTLTIKVDIMDNSSDN----SVNNRLKQEL--SESGKNAREYQPATSFKCLKASHTESEDTTDCLNS-GRISNIKHKVLTSAYLMARRHS-RLFPEDC----CLRKG---KNDTYTVSNVNSRAAVPRSPKGQPPQSSPSCSDCLIDMRHGTAFVTNSKFNNTLSHIKFGM-NR-------VS----SNSCNKISADKRR---ASDQLSVAECREIVAP-LGINCLENNSTSLKQRGK--------------------EDVDENQETLSIKSSENPQAAAWNNESIEVAEEFLDCIDNSLN-E-------VVSEEDRQVAPVYF------------------------------------------------NTKPIESLEHKGKSS----------G---DLNACSSSLSFGGFQTASNKQIKFSESSIAKGKMLFKDIENE--FFEASSME-------------RVRNFS---------NRVQKENIFSSDLESKTGSTSSG--------LQTRCMQYIP--------------------RKVDLCKNSPRNQLSVQEPNQSLTASQEAEIAELSNILEETGSQFEFTQFRK----QSNMIQSHI----------QQFGATNVENASEAGEDTNFYSTLKSENHVI-NDEYCSKLKNENECKMVEY-EKEDTVVFHKNKRKVTF-TNLDRNESRISSHESCPVPLRDSFSNFV------------GFTSAGGK-KINICKAALTRSAELFKD-------LDDDNFL----FKSSGTNTRCCNSDGH--VSSNWNFLRC---QTKEDEGGILCVP-----NIKSVGPISH--HSE----KKYAENISSPCKENTEN--------------------------------------WTEI---LSDNVDFSCT-NGGYSASGMRNSPSSFKKPHQNCKNSDQFLNQGNSEVEGCLQEDTSYLICLGDNITSAEEHDLNVSDEMENLSPNQKEDRKQEDEHLLL--NRQAADTDAVSISDSSFRSSLRDLNVQCGERDT-----------------DVSEKSSKQKTNSVSVEGEDSTYKNLFVSESEIKIGSNQRHQVPSEQEMDVDKNKVKGTYLT-----GFCTASGKKITIADGFLAKAEEFFS-ENNVDLGKDDNDCFEDCLRKCNKS----YVKDRDLCMD-----STAHCDADVLNFK-----DKLIPQEPGDRLKQTIEESPIIQAVNHD-----SIK-VGAFINVDEDCERNLAAPCANKEAYVRPGKSEVESLPVHGNN-SLSRTLLLEDRKQFAE--RDVEYSATKRDNS---------ESKPDSSLKCATSLHLT-----------KVSSHLADNSVPGGIIQTVSAEDSCKSNQSFL--L---PRGSVPRSTSPYL---NCGNKEIDLKRLNEPCSN-TDSFTNTVDNAHQEQSEFDLPEDETNLTCLQETSLNAESQK-----SDLK-----------------------QVFSTAKGKAVSVSESALASIRQMFQT--DCDAS-VKSEIETKSGTNQTAIAGSSSFSIHAGGPGFA-TFLDTRKSEMNVAAPHFINGNGNLIENN----HQGANMFADADSVPGFQMQCFEQKSKLLGHFPVPDKQMEQSGPSGNL-GFFSTASGKPVQLSEESLKKARQLFSEM-------EGSHSSGLQDAHLL----EDVEKSTNHGEVFPREMQLLLPRGKENASTDKISSPA----LGFSTASGKQVTISESAYQKAKAILKEADGFLSSELGVTNELCEIKE-----------SGQHAEYLTGKVISESKTEKSCSEELDLKSIHPEKMKSLPSTHRVKITEYVPHSKRNS---QSAPFKNSFEQEETRFFRKGE-----LNLGIKAESESDLCSATSKAEIN---IFQTPKDYLKT-EAVESAKAFMED-DLSDS------GVQVKSAQSFGKMSDN-----FQNKPFGKRH--------LDEKDSHGEPPIKRQLLLEFEKM-KIPPKS-VKPLKSTPDGIFKDRRKFMYHVPLKPVTCRP--LGTTKERQEVRNPTLTLPDQDLKGFKSIPAVFQHCALRQSSSGA---SGLFTP-HKA--VAKDSEET---------RSLCKSGKAVKTFVPPFKTKLTLS-------TGEQGGSKRCHSPIRNSVMEERE-------LNQIPVEQNSAEARDHQSCILHA---AVTDIENDNLVTS---NMMANLHCARDLQEMRIKKKYRQNISPQPGSLYVTKTSARN-RISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVCFPHKFANRCLTPETVLLQLKY-RYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKVLSLNTAV-------SPSNSN---NNTEGEKAAAIIEVTDGWYGIRALLDPPLKAFLHRRRLTVGQKIIVHGAELIGSPNGCTPLEAPDSLMLKIAANSTRCARWYTKLG--FHRDPRPFPLPLSSLYSEGGTVGCIDVVVQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKH-EERNCRRAPR--SRIVT--RQQIHNLQDGAELYEAIQNAADPSYME--GYLSEDQLKALNAHKQLMNDKKQTRIREEFKKAVESAEQEKHGFSKRDVSTVWKLFVIDYRKQEKHRGVI---LSIWRPLLDVCSLLKEGSRYRICQLSTSQSKGRSDSTNVQLSATKKTRYLQLSVSQKMLQQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRT-------------GFSNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSE----FRSEIPVLLAGDLSAFSASPKENHLQEKFNELRRMIE-NVDSFCSDAESKLMNLLQRNCSLTPILPKRCGLECSSPSCNSG---LYAEDR--SSISS-KIETKHPSPLSASTP-NTKLFP---------QGSAITPSSAVSSEN---HPRNSKKRK-AVDFLSCIPAPPPLTPLCSIISP-SLKKAFQPPRRLG-SQ----H-SKLSKETNPNAG-CVTPSRRLREAVQLPDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRATNLSGDTRATNLSRDMRAPNLSGDLSSKNSSRSAKEANSSLKSSSEGADALQKD---TEE-------------------PEGSLSIRRVLQRRKSRKCY","is_aligned":1},"location":"1:173820724-173857456","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSGALP00000027524"}]},"branch_length":0.029007,"id":{"source":"EnsEMBL","accession":"ENSGALG00000017073"},"taxonomy":{"scientific_name":"Gallus gallus","id":9031}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,310,742,2766,2799,2825,3000,3065,3128,3186,3314,3368,3418,3465,3536,3592,3651,3742,3799],"number_of_exons":26},"sequence":{"mol_seq":{"seq":"----MAYKFGKRPTFFEVFKAHCSDS-DLGPISLDWFEELSSEAPPYEPK---LLGEPEGPIGWFDQT-FKTPKAKSSTDSQLASTPLIFKEQ-ITM---PP--F-SSPGKELDQKKMETSRE------NLQSPNMAGRKTDQENQILASPHGICHNYTAASPAIFRNTCRTPQKS----------NIPGPYGSLFCTPK--FLE-IRTPKRICESLGAEVDPEMSWTSSLATPPTLGATVII-ARENDSISGAKQQDERAEIVFH----NFLSKNGEYTTKNDTSLLSIPETVKLNAK-DDIKDLELEMLDGIFGEMNSFEDSFNLPAESSGTLLLLPRALDAIEKCEIKIDE-AQGKDDVLSEQRMRRKTAISQEVKAANLS-EKSCCVEVKD---SVFQNT-DEDIVDSKDSSLIGHEKELEYLRIAGNLQD---NRTQKSSVNEKLMKDVLSSS--NQWSQLNLSD-LDVTHLETSM-------CSSPQSDLHREKGLEEKSELMTKDDVVETSLLNTGDLKN-AQELSSASLSENCSDTEISKNIPMTEITPVKPLCA---SPKLVKGCAHEGVCKMNFLNCSSFLIESTNVMEYSV-VY-----------NSTFSTHLKATSKSVVTDVFSHPLICSAASPDNCSDLHLTNSENALRKS-----SFKSLNMLSRLRKKSKRFIYTINNTLVYQEENVQKEVTSESPANPLLTRLESDLHEFKGCQVATGVNQDCLLSA----------KRQSNIKENNFNTPTTEIDAMDNSSDNS---VNNRLKQQEL--SDSGKNAREYQPATSFKCLEASHTQSEDTTDCLKS-GRISDIKHKVLTSAYLMARRCS-RVFPEDC----CLKKG---KNDPYISPNMNSQTAVPQSPIGQPPQSFPSCSDCLSDIHHGTAFVANSKFSNTLSQIKFGM-NR-------VG----GNSCNKISADKRH----ATDQLSAEYREIVAP-LEINCLENNSTGLKQRGK--------------------EDVAENQETFSMKNSENSQAAAWNNKSVEVAEEFLDCIDNSLN-E-------VISEEDRQLAPVCF------------------------------------------------NTKPIENLEHKGKSS----------G---DLHTCSSSLRFGGFQTASNKQIKFSESSIAKGKMLFKDIENE--CFEASSME-------------RVRHFS---------NQVQKENIFSSDLESKKGSTSSG--------LQTRCTQYIP--------------------CKVDLCKNSLRNKLSVQEPTQSLTASQEAEIAELSNILEETGSQFEFTQFRK----QSNMIQSHV----------QQFGATNVENASEAGEDTNFYSTFKSENHVI-NDEYCSKLKNENECKMVEY-EKENTVVFHKNKKKITS-SNLDRNKSGISNHESCLVPLQASFSNFV------------GFTSAGGK-KINISKAALTRSAELFKD-------LDDDSFL----FKSSETNTGCCNSDGH--VSSNGNFIRC---QTKEDEGGILCVP-----NIRSIGPISH--HSE------YVEDISTPCKESTEN---------------------------------------WTEILSDNENVDFSCT-NARYSASGMRNNPSSFKKPHQNCKNSDQFLNREDSHVEGCLQEDTSYLMCLGDNTNSTEERGLSVSDEMGNLSPNQKEDKKQEDEHLLL--NCQAADTDAVSISDSSLCSSLRDLNVQCGERDT-----------------DVSENSSKQKTNSVNVEGEDSTNKNPLVSESGIKIGSYQHHQVPSEQEMDVEKNEVKGTYLT-----GFHTASGKKITIADGFLAKAEQFFS-ENNVDLGKDDNDYFEDCLRK--------CNKSCVKDRGLYMDGVAQRDADVLNF-K-----DKLISEEPGDQRKQAIEGSPIKQAINHD-----SIK-VGAFINVDEECERNLAAPCANKESYVRPGKS--ESLPGHGSN-SLSRTLLFEDRKLLAE--RDVQHSAEKRDNS---------ESKPDFRLKCATSLHFT-----------KVSSDLADIPVPGGIIKTVSAEDSCKSSQSLL--L---IHGSVPKSSSPYL---NCGTKEIGLKRLNEPCSN-TDCFTNTADNAHQEQPEVDLPEDGTNLTWLQETSLNAESQK-----SDLK-----------------------QMFSTAKGKAVSVSESALSSIRQMFQT--GCDEH-VKSEIETKSGTNQAEIAGSSSFSIHAGGPGFA-TFLDPTKSEMNLAASPFINGNGHLIENN----RQGANTSADADSVQDFQMQCFEQKSKPLGHLSVPNKQREQSGPSGNL-GFFSTASGKPVQLSEASLKKARQLFSEM-------EGSHSPELQDALLL----EDVEKSRNSDEIFPREMQLALPRGKENASTDKISSPA----LGFSTASGKQVTISESAYRKAKALLKEAD-DLSSELGVTRELREIKE-----------SGQHAKYLTSKVISESKTGKSCSKELDLRSIHPEEMKSFPSTHRVKITEYVSHNKRNS---QSAPFKNSFEQEETRLFRKGEL---NLRMKTEAESDLCSATTKAEINI-----FQTPKGYLKT-EAVESTKAFMED-DLSDS------RVQVQSAQSFIGKMSD----NFQNKPFGKRH--------LEEKDSLGEPPIKRQLLLEFEKM-KIPPKS-FKPLKSTPDGIFKDRRKFMYHVPLKPVTCQP--FGTAKERQEVRNPTLTLPDQDSKGFKSVPAVFQHCALRQSSSGA---SGLFTP-HKA--MAKESEET---------RSLCKSGKAVKTFVPPFKTKLMLS-------TAEQGSSKRCHSPVTNSVTEERE-------LNQIPVEQNSAEAQDHQSCIPHA---VVTDVENDNLVKS---NMMANLCCARDLQEMRIKKKYRQNISPQPGSLYVIKTSARN-RISLKTAVEEETPSFHSTEKLYTYGVSKHCIQVNSTNAESFQFLIEEFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPHKFANRCLTPETVLLQLKY-RYDLEIDKSKRSAIKKITERDDAAGKTLVLCISKILSLNAAL-------SPGNSN---NSTECEKAAAIIEVTDGWYGIRALLDPPLKAFLRRRRLTVGQKIIVHGAELTGSPNGCTPLEAPDSLMLKIAANSTRRARWYTKLG--FHRNPGPFPLPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEFEKQ-EERNCRRAPG--SRIVT--RQQIHNLQDGAELYEAIQNAPDPSYME--GYLSEDQLKALNAHKQLMNDKKQTRIQEEFKKAVESAEQEKHGCSKRDVSTVWKLFVVDYRKQEKHKGVI---LSIWRPLLDVCSLLKEGGRYRIYQLSTSQSKGRSDSTNVQLSATKKTQYLQLSVSQKMLLQIFFPRKALKFTSLLDPSYQPPCAEVDVVGVVISISRT-------------GFPNMVYLSDESYNLVAIKIWADLRHFAIEDIVVRCSFIAASNLQWQSE----FRSEIPVLLAGDLSAFSASPKENHLQEKFSELRRMIE-NVDSFCSDAERKLMNLLQRNCSLTPILPKKCGLECFSPSCNSG---LYAEDE--SSISS-KIEMKHPSPLSASTP-NTKLFP---------QGSAITPSSALSNEN---HPRNSKKRK-AMDFLSCIPAPPSLTPVCSIISP-SVKKAFRPPRSLG-SQ----H-SKLSKETNPNAG-CVTPGRKLREAVQLSDNDLVADEELAMINTQALINTVPEEKKMDYVNEDSTRASNLSGDTRAT---------NLSGDLSSKNSSRSAKEANSLLKSSSEGADALQKD---TEE-------------------REGLLSIRRGLQRHKSRKCY","is_aligned":1},"location":"1:182034286-182069530","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSMGAP00000015990"}]},"branch_length":0.037651,"id":{"source":"EnsEMBL","accession":"ENSMGAG00000015077"},"taxonomy":{"scientific_name":"Meleagris gallopavo","id":9103}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Phasianidae","id":9005}},{"exon_boundaries":{"boundaries":[27,121,163,191,208,247,270,310,742,2766,2799,2825,3000,3065,3128,3186,3314,3368,3418,3438,3460,3464,3537,3593,3652,3743,3799,4047],"number_of_exons":29},"sequence":{"mol_seq":{"seq":"----MACRSGERPTFFEIFKTRCSDSADLGPISLNWFEELSSEAPPYEPK---LLELD----APIDQTSFKTPKAKPFTYSQLTSTPPIFKEQNTIM---PP--F-SSPGIELDQKKIGTSRE------NFTSPSIIGRKRDQENEMLASPLGTCHNFLAASPAILRNAFRTPQRS----------NIPGPYGSLFCTPK--FLE-VRTPKRISESLGAEVDPDMSWSSSLATPPTLGATVII-ARETSSISGPKQQDERAEIVLH----SFSSDHDECPGKNDSSLLSIPETVKLNGE-DVTKEFESEMLDGFFGEMDSFENTLTVPAESSGTLLLLPHALDAIDKCETKRDE-AQGEEDVPSEQPVRRKTGISQEVEMGNGA-EKSHPIEMKD---YLSQNA-DEDTGDSKDACLIGHEKELDLLRITGNMQDNGMEK---SCENEKLVKDDVLSS-SSQWSQLNLSG-LDVTHLEMSTCS--SPSIDLCTDKDLKEKTALMAKDD-----AVGTSLLNTLGLKN-AQQLLNASLSDMHEEMQKTGNNPTAEVTPVRSVHL---NPELVKGHAAEKVSKMSFINCNSFLIKSTNVMEYSV-VY-----------NSSFSKCVKATSKSVVTDVLSHPLVCSTSSPDNCSDLHFTSSENTLTKS-----GFKSLNMLSRLKNKSKRFIYTINNTLLYQEEKIQKEVTSELPADLMLPQLETDSHEFQGCHVAADGDPDSLLSA-----------------ERQLNIKEDNLSTCVKKDLEDNSSFDSRLKQQEL--RNLGKDTREYQPATSLKCLEVSNHQKEDTTDSLNS-ERISNIKRKVLSASCLMARKRS-RLFPEDC----CLEKG---EEDTSMSHNVNNGATVPQSLKRQPAQAFPSNNDCLLDVCHDITSVTNRDVNKTLSQINFDI-NR-------VS----SDSCSKISADEKH---ATDPLALVEHRQVLAP-VGMNCSGDDRIRLKQCGK---KDVAAFS----------GDVADNQETRLVKSDESPEAAACNKVAVEIVEELLDCIDDNSLIE-------VISEEDKQVPPIYS------------------------------------------------HKEPNENLEHEGKSS----------G---IVNVCRSNLSFGGFQTASNKQIKFSEDSIAKGKMLFKDIENE--CFEASYVE-------------RGRNFS---------NQVQKENVFSSNLESKLGSALSG--------SQTRRTQFTP--------------------HKVDLCKNFPRSLHSLQELNQTLTASQEAEIAEISSILEETGSQFEFTQFRR----QSNMVQSVE---KQDIVTVEMHGAANVENNSEPWKDTDPCSTFKSENQVRNDKYCSTWKDTDEECKMVEY-EKENKVLFHKSSEEVTF---SDRDESGVSDGESFPVPVQASVSNFV------------GFTSAGGK-KINISKAALTRSAELFKD-------LDDNYLL-----KSSETNTGCGNSKGSRGMSSNWNSFRCLTKENKGVSNINSVGA-----ISHAHSISHH--SEN---VGTPEKENKENWTERLIS---------------------------------------------DDERVDFSHA-NARHSAYGMRNSPTSIQEQNQNHKIPKQVLNPGDCQAEDSLQEDSLYVTCLGDATATAEHCDLSISDEMENLFPAEKGEDSRQKDE-HLPQKFQTSDG-AISVSGGPLDNSLHGLSVNCGERDV-----------------DVSENSDKQKTTGINIEGEDTTDESLFVNESRIKMGSYQHHQVPFEQEVDVEPSEVKGSFLT-----GFQTASGKKITIADGFLAKAEQFFS-EEDVDLGKEHNDNFEDHIKNRKRSVN--CVKGCDLRID-----NVAQCD------A-----EKLISEEPGIRFKQTRGSSPTKQAVILD-----SVK-VDAFANIGEDSDRNLVAAY--EKADVQHGKSELESLSEWESK-ALSRTCLSEDGKLFAE--MDVECSAKKKDKS---------ESTHGFPVQSAISLPSM-----------KVSSNPVDNSMPCDVKNTLFVEDSSKSDQSVL--KAYSSVS------QSHCPQLNSDSKEFDVQHLNQPCSN-TSCFADAALTAHQKQSEVGLPEGGTNLACLQETSLNFNDGN-----PKGGLKQ--------------------TVFSTAKGKAVFVSESALARVRQMFQE--DYGES-VKHEIKTKSRTNQTEIPVNSSFVVPAECPNST-KFLDATKREGNSAASHFTDGNVNASEDS----QQDANPFEDEISVPNSQVQGFGQNTALLGHVPVPNKQMKQSDSSTSNLGFFSTASGKPVQLSEESLKKARQLFSEM--------ESSHSSGLQEFQVEGDVEKSEKLAEEV-----FPRKMQLEERENASTKMISGPA----FGFSTASGKQVTVSENAYQKAKAILKESDDFLSNELCIIDQLHAIKE-----------SGHRTKSRTGNVISESKTDKSCD-ELDFKSIHPEEMKSSSSTHHLKMPEYVPHSKKN--------SQLALVK-NSFKQEETGPVRKGLNLGMKTESEAVSCSATAKAEIND-ELFQTPKSHFKV-GTVGNEKASVGD-HLSDP------GAKTNSAQSF--CGKT-SDKSFQNKTFGKRH--------FEEKNALGEPPIKRQLLLEFDKT-KMPPRS-LKASKSTPEGIFKDRRKFLYHVPLKPVTCQP--FGASKERQEVRNPTLTLPDQDFKGFKSKPAIFQHCALRQSSNDA---SRLSTP-HKA--SAQESEEK---------RNLNKSGKTAKTFVPPFKTKLTFS-------TSEQGSSKRCDSPISKNMTEERE-------INQIRIEKDTAETRDHPSCILHA---ADTDLENGNLVMN---KMMANLRCARDLQEMRIKKKFRQNISSQPGSLYVIKTSARN-RISLKTAVEEKSPSFYSTEELYRYGVSKHCVQVNSTNAESFQFLIKDFFSKEYLLAGNGIQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVAFPHEFATRCLTPETVLLQLKY-RYDLEIDKSKRSAIKKITERDDAAGKTLVLCVSKIISLNAVV---------SPSN---NNMESKKGAAIIEVTDGWYGIRALLDPPIKAFLHRRRLTVGQKIIVHGAELVGSQNGCTPLEAPDSLMLKISANSTRCARWHAKLG--FHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRAYPIQWMEKTSAGSYVFRNSRAEEREAARHAEDQQKKLEALFAKIQAEFEKH-EGHQDSCHTDRGFRVLSCSDLLLTNYPLGA-VYNVIRRQLSTRSFRLQGYLSEDQLKALNAHRQLMNDKKQTRIQEEFKKAVESAEKEKYGCSKRDVSTVWKLCVVDYRKQEKHKGVI---LSIWRPPLDVCSLLKEGSRYRIYQLSASQSKGRAESTNIQLTATKKTQYLQLSVSKKMLLQIFFPRKALKFTSLLDPSFQPPCAEVDLVGVVISVSKT-------------GFATMVYLSDESYNLVAIKVWADLRHFAIEDIVVRSSFISASNLQWQSD----FRSEIPMLVAGDLSVFSASPKETYLQEKFNELRSLVE-NVDSFCSDAESKLMNLLQRSQSLTPTLPKRCGSECFSPSCNSG---LYAADK--SLISSSKMEIKYLSPLSTSTP-NMKLVPQ--------GSAKTPSFDE----D---HPKNSKKRK-AMDFLSCIPAPPPLTPICSTISP-SLKKAFQPPRSLG-LQ----R-SKSGKETNPNVG-FVTPSRKVREAVRVPVNDLVADEELAMINTQALINTLPEEKKTEGVNETSTIAT------------------NLSDDLSSKRSSRSTEEAKNSLKSSSEGAEALQEDDAATKE-------------------LGGSLSTHRMLQRRKSRKCY","is_aligned":1},"location":"KB742680.1:477155-513214","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSAPLP00000007411"}]},"branch_length":0.111907,"id":{"source":"EnsEMBL","accession":"ENSAPLG00000007774"},"taxonomy":{"scientific_name":"Anas platyrhynchos","id":8839}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Neognathae","id":8825}},{"events":{"type":"speciation"},"branch_length":0.093846,"children":[{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,310,742,1028,2767,2800,2826,3001,3066,3129,3186,3315,3369,3419,3466,3537,3593,3652,3743,3800],"number_of_exons":27},"sequence":{"mol_seq":{"seq":"----MACKPGERPTFFEIFKAHCNES-DLGPISLNWFEELSAEAPPYEPK---SFGEVDGPSGWLDQTAFKTPRTKPSTYSQLASTPLLFKEQNAIL---P-----PSPEKEPDQKKIGANRE------NLISPSNRRRKLDQENEILASPPGTFHNCLAASPAILRNTYRTPQRN----------NIPGPYGSLFCTPK--LSE-VRTPKCISESLGAEVDPDMSWSSSLATPPTLGETVII-ARENDSISEAKRQDGRADTILH----NYFSKHDKCPGISDASMLSVPETVKLNAE-DDIKDLESEVLDGLLGEMDSSEDTFSMPAESSRTLLLMPHALDAVEKYEINPDK-AQEKGDVPSQQPNGRKNGISQEVKTNSWT-ENSLCTQVNS---SLLQNT-HEDTGDGKDGSLIGHEKELESLRKAGDVHD---CRPHKSFENERPVKEGVQSP-PSQWSQLNSD--LDGTHRE-------MSVCSSLPSDLRREENLEEKSLLMAKDDVAETSLLNSSGLIK-AQKLFNVDLSEKSREMKDTESNPTSEITPVKSVSLGVQDPELAKECAAE-VSKMSFSNCNSFLIEHANVTEYSL-VY-----------GGNFSKHLKAASKSVITDVLPHPLVCSATSPDNCDDLHLINSENTPTKS-----GFKNLKMLPSLRKRSKKFIYRINNTLLYQEEKIQKEVTSESPIHSVLPHLESDSYEFRGCLVASDVKQDHFLPA-------ERKHLESNTSAKNFSTSTSKIDIMDNSSGN----SFSDTLEQDL--RDLGENAREDQPATSIKCLEVSNTLKEGITNSLNS-EIISNIKRKVLTSACLMARKRSKLLPETTCALEKGK------EDNMSAKVNDGAAAPQSLEELGS----SQRDREVLVDIQGDSTSVTNSSSHNTLCQINLGI-TG-------VS----SGCCNKLSPHKRH----ATDQRSGVDCREVHRPLGINCSEYDSTGLKQGEK---------T----------DDPANNEDPKPTENSKSPQAAAFSNVAVDISKELLDCIDNNSLNE-------VISAEDKQIAPMCS------------------------------------------------SKKPNKNLKCKRESS----------V---NLNACSLNLGFSGFQTASNKQIKFSEASIAKGRLLFKDIENE--CFEASSME-------------RVSNFP---------HKVKKENILFSGSKNKLGSNSSDSSDSQASFLEPRHAEFIP--------------------HKVGLCKSFPGTPQALQEANQTLTASQEAEIAELSSILEETGSQFEFTQFRK----QNNTTQSRS---LQKLGTVETRRIKNVENISETRKDMGVCSTLKSENQVKNDKFCTQEEDTNEDSELVEN-EKENAVFFHKNDKKVTF-TNLDINESRR-SDESFPIPKQDSFSNFI------------GFTSAGGK-KINISKAALSRSAELFRD-------LDDDNYL----FKSSETGTRCHNSNGS--MSSNSNSSRCLTKESKEKTVSDF-----KSVSHTGSVSYHA--QNK------NEENTSTGFKEDMEN--------------------------------------KTKISVNNIENVSFGSISILNCLL-------S-TKNRKQNFKTSKQILNPGDDE--GNLQDHSLDVTCLEDAITTAEEHSLNTSCEMENHSPKQKGEDRKEDECLSP--KFQTPAAGDISIPDAILDHSLPLFSVQCGEGDV-----------------HVLENFDKEKINCKNIEDTAHG-KDLLVNESRIEIGSYHHCQIPLEQEVNVGENKVEGSYLT-----GFHTASGKKIAIADGFLAKAEQFFA---DVDVGMEHDNFENLIKKRKFGKN---CVKDCDLGIE-----SIAQCDSEKPNFN-----EKLVPEELGDQFNQAIERSPIKHAVILDPG-----E-VDTFVDLGEACEGGLVPSHAHKKADVKPGKSALESHIGQ-KSDALSRTHLSEDRNFLAE--KKVPYSPRKRDDS---------ENTDDFPVHSAASLHLM-----------KVPHDLEDNCVPGDTKNALFVKESNNKADQSL-----------LLDSKSSCSYMNGDSKEFDLEHLNEPAAD-KNSFTGTIANACQNQSLMSLPEEETNFSRLKETTLKVEKQR-----GHLKQ----------------------TVFSTAKGRAVSVSESALARVRQIFQD---CSEA-VKYEIEPNSKTNQTEIARNSSVVLHTEYPNSA-ELFNARTSEEVNSAASQFIKVNASADEDSHQEGNTS---ADAKSVSNSQKQSFEQNIKLLGHF-VPNKQIKPSDASTSNFGFFNTASGKPVQLSEESLRKARQLFSEM-------EGNHSQHVQEAFLVEEDVEKSKMHT---EVLPRRMQVVSSKGVENTSPELISDSA----FGFSTASGKQVKVSKDAYQKAKAILEESDCILDSGLCTTDHLSSIKD-----------SGQHVKSLTDKVISEFKTEKGCNQNSDFKSTCPQEIKYFPSTYYVKMPEHTPYKKENK---QLTSFENNLQQEETESFGKGQ-----LNLGSKPESEAISCSAAAKAEIDT-NLLQSPKNYLEV-EAAESARAFMED-SFSSS------GVQINAAQTFSGRLDK----NFQNKSFGKRR--------FEENNSLGEPPIKRQLLLEFNRT-KDSPRS-LKASKSTPDGIFKDRRKFMYHVPLKPITCQP--FGSTKERQEVKNPTLTLPDQDFRGFQSKPAIFQHCALRHSSDSA---AEASTP-CKA--STKESEEM---------RSLYKPGKAAKTFIPPFKTKLTFS-------TCEQGSSKRSDSPISKSMTKEME-------LNQIRTEQNTADPQDHQSDIQQA---ADTDLENGNLAVT---WMVTNLRCARDLQEMRIKKKCRQNIRSQPGTLYVIKTSASN-RISLKTAVEEKSPSFYSTEELYTLGVSKQCVQVNSTNAESFQFLIKDFFSKEYLLAGNGMQLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIIWKLAAMEVSFPHEFANRCLTPEMVLLQLKYSRYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLDAVA-------SPGNSN---KNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRRLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLG--FHRDPRPFPLPLSSLYSEGGAVGCIDVVIQRTYPVQWMEKTTAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKH-EERSSRRTPRS--RIVT--RQQIRNLQDGAELYEAIQNASDPGYME--GYLSDDQLKALKAYRQLMNDKKHTQMQEQLKKALESAEQEENGCYKRDVSAVWRLYVTDYRKQEKHKGAV---LSIWRPLPDVCSLLKEGTRYRIFQLSASQPRGRADSTNIQLTATKKTQYLQLPVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVSRT-------------GFTTVVYLSDESYNLVAIKIWTDLRHLAIEDVLVRCSLISASNLQWQSE----FRSEIPVLLAGDLSLFSASPKEFYLQEKVNELRSVIE-NVASFCSDAESKLMNLLRRNLLLTPSLTKRCGLESPSPSCS-----FAEDKS----LMSSRTEMKYPSPLSTSTP--SMKVVTP-------GSAKAPSSATVDE-D---HLKTSKKRK-AMDFLSCIPAPPPLTPICSVISP-SVKRAFQPPRSLG-LQ----H-SKSPKVTDQNSG-YVTPCRKVRETVHLPENDLVADEELAMINTQALVNNLPEEKKMDVNENSTATATT------------------LSDDLSSRNSSRSTGEANNSSKSVLK-----------------------------------------------------","is_aligned":1},"location":"JH603207.1:3296246-3332661","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSFALP00000008821"}]},"branch_length":0.039978,"id":{"source":"EnsEMBL","accession":"ENSFALG00000008451"},"taxonomy":{"scientific_name":"Ficedula albicollis","id":59894}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,310,752,756,1039,1269,1384,1610,2768,2801,2827,3002,3067,3130,3188,3316,3370,3420,3467,3538,3594,3653,3744,3801],"number_of_exons":31},"sequence":{"mol_seq":{"seq":"----MACKPVERPTFFEIFKAHCSES-DLGPISLNWFEELSAEAPPYEPK---SFAELDGPSGWLDQTAFKTPRTKPSTYSHLASTPLLFKEQNSIL---PP--C-SSPEKEPDQKKIGANRE------NLISPSNTRRKIDQENEILASPPGTCHNCLAASPAVLRSTYRTPQRN----------NIPGPYGSLFYTPK--LSE-VRTPKCISESLGAEVDPDMSWSSSLATPPTCVETVII-ARQNDSISEAKQQDGRADTILH----NYFYKHDKCPGISDASMLSVPETVKLNPE-DDIKDFKSEVLDGLLGEMDSFEDTVSMPAESSGTLLLIPHALDAVEKYEINPEK-TEEKGDVPSQQPDGKKNGISQEVKTNGWKLENSHCTQVNS----------SLLQNTSEDGCLIGHKKELESLRNAGDVND---YRPHESFENERPVKESVNSP-SSQWSQLNLSG-LDKAHME-------MSVCSSAPSDLRGGENLEEKSLLMAKDDPVETSLLNSSCLIK-AQKLLSVDLSEKCCEMKNTENNSTSEITPVKSVSLSVQDPELVKGCAAE-VSKMSFLNCNSFLIEHGNDTECSV-VY-----------SEKFPKHLKATSKSVVTDVLSHPLVSSAKSPDNCDDLYLINSENTLTKS-----GFKNLKMLPSLRKRSKKFIYRINNTLLYQDEKIQKEVTSESPIHTALPHLESDSYEFRDCLVASDVEQ---DCT-------FGKYLESNMRTKNFSTSTLKIDLMDNSSDNS---FSDGLKQQDL--EDLGENAREDQPAASIKCLEVSNTLKEDTTNSLNS-EIVSNIKRKVLTSACLMARKRS------------RF------LPKSCALGKGEEGKDISAKVNNGAAVPQSLKELGSSHRDKELLIDIHSD-SMSLCQINFGI-TG-------VS----SDCCNKLSPNKRH----SADQRSGVDCGEVQRPLGINCSENDSTVLKQGEK---------T----------DAAAFSEDVANTENSKSPQAAAFSNVPVDISKELLGCGDNSLN-E-------VISLEDKQVAPTYS------------------------------------------------SKMPNKNLKCKGESS----------V---NLNACSLNLGFSGFQTASNKQIKFSEASIAKGRMLFKDIENE--CFGASSME-------------RVRNFS---------HQVKKENMLFSDSKSKLGNSQASFL-------EPRHTQFTP--------------------HKVGSCKSFPRTPQALQESNHTLTASQEAEIAELSSILEETGSQFEFTQFRK----QSNAIQKTA----------ETHGTKNVENISDTRKDVEVCSTFDSENQVKNDKYCAQEEDTNEDTELVKN-EKENAVFFHENDKKVTL-TDLDINESRR-SDESFPIAKQDSFSNFI------------GFTSAGGK-KINISKAALSRSAELFRD-------LDDDNYL----FKSSETATRCHNSNGS--MSSNSNFSRCLTK---ESKEKTVHVSDFKS-----VNAVSHTGSNK------NEEHTSTVFKENMEN--------------------------------------KTKISVNNTENVSF----DSINII---NSLLS-TKNHNQNYKTSKEILNQGDDE--GNLQDHSLDVTCLEDAITTVEEHRLSTSYGM-ENQSPKQREDRKENECLSP--KLQTPAGGDIFIPDAALDYSLPLFSVQCGEGDV-----------------NVLENSDKEKTDCKNMEEDTSHNKNLLVNESRIKIGSYHHSQIPLEQEVNMGGNEVEGSYLT-----GFRTASGKKIAIADGFLAKAEQFFA----------DVDIGNDNFETLTEKRK--CGKNCVKDCDLC-IESVAQCDSEKLNLN-----EK-------------------LVAEELGDQAVDSSP-IKHAMILDPACEGSLVTSHTHKKADVRPGKSELESLKGQKIDV-LSRTHLSEDGKFLAE--KMVDYLSRKRDDL---------GNTHDFPVHSAASLHLI-----------KVPHDVKDNSVPGGTKNTLFVEESNNKGDQSL-----------LLDSKSSCSYINGDSKEFNLKHLNEPAAD-KNCFTDTIDSACQNQTLVSLLEEETNFNRLKETTLKVEKQR-----GDLKQ----------------------TVFSTAKGKAVSVSESALASVRQMFKD---CSEA-VKYDIEPNSRRNQTEIARNSSVVLHTECPNSA-NFFNATTSREVNSATSQFIKVNASADENNHQERSTS---ADAKSVSNSPKQSFEQNSKLLVHF-VPNKQIKPSDASTSHFGFFSTASGKPVQLSEESLRKARQLFSEM-------EDSHSPHVQEAFLVEEDVEKSKMHI---EVLPREMQVVSSKGEENTSPELISDSA----FGFSTASGKQVKVSKDAYQKAKAILEESD------YILSSGLCTTDQ----LNSIKDSGQHVK-SLTDKVISEFKTEKSCNQDSDFKGICPQEIKYFPSTHHVKMPEHTPYNQKKK---HLASFKNNFQQAKTESFGQGQ-----LNLWSKTDSEAISCSATAKAEINT-NLLQSPKNYLEV-EAAESARAFMED-SFSSS------GVQINAAQTFSGRPDK----NFQTKTFGKRH--------FEENNSLGEPPIKRQLLLEFNRT-KNSPRS-LKASKSTPDGIFKDRRKFMYHVPLKPITCQP--FGSTEERQEVKNPTLTLPDQDLRGFQSKPAIFQHCALRHSSDSA---AGVSTP-CKA--SAKESEET---------RSLYKSGKAAKTFIPPFKTKLTFS-------TSEQGSSSRCDSPISKSMTKEME-------LNQIRTEQNTADPQDQQPCIQHA---ADTDLENGNLAMA---RMVTNLRCARDLQEMRIKKKCRQNIRSQPGSLYVIKTSASN-RISLKNAVEEKSPSFYSTEELYTYGVSKQCIQVNSTNAESFQFLIKDFFSKEYLLAGNGMHLADGGWLIPTDEGKAGKKEFYRALCDTPGVDPNLITEAWVYNHYRWIVWKLAAMEVSFPREFANRCLTPEMVLLQLKY-RYDLEVDKSKRSAIKKIMERDDAAGKTLVLCISKIISLNTVV-------SPSSSN---KNMESKKAAALIEVTDGWYGIRALLDPPLKAFLDRRQLTVGQKIIVHGAELVGPQNGCTPLEAPDSLMLKISANSTRRVRWHTKLG--FHRDPRPFPVPLSSLYSEGGAVGCIDVVIQRTYPIQWMEKTSAGSYVFRNSRAEEREAAKHAEDQQKKLEALFAKIQAEYEKH-EERTSRRTPRS--RIVT--RQQIHNLQDGAELYEAIQNSSDPGYME--GYLSDDQLKALKAYRQLMNDKKQTQLQEQFKKALESAEQEENGCYKRDVSAVWRLYVVDYRKQEKHKGAV---VSIWRPLPDVCSLLKEGARYRIFQLSASQSRGKADSTSIQLTATKKTQYLQLSVSQEMLVQIFFPRKALEFTSLLDPSFQPPCAEVDLVGVVISVRRA-------------GFTTVVYLSDESYNLVAVKIWTDLRHLAIEDVVVRCSLISASNLQWQSE----FRSEIPMLLAGDLSLFSASPKECYLQEKVNELRSVIE-NVASFCSNAESKLMNLLQRNLLLTPSLTRRCGLESSSPSCS------YTDNR--SLISS-RIEMKHPSPLSTSTP--NMELVTP-------GSAKTPSPATVNE-G---HLKTSKKRK-AMDFLSCIPAPPPLTPICSVISP-SVKRAFQPPRSLG-LQ----H-SKSPKETDQNIG-LVTPCRKVRETVHLPDDDLVADEELAMINTQALMNNLPEKKKMDYINEISKATAT-----------------TLSDDVSSRNSSRST-----------------------------------------------------------------","is_aligned":1},"location":"1:50805062-50838975","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSTGUP00000012130"}]},"branch_length":0.055624,"id":{"source":"EnsEMBL","accession":"ENSTGUG00000011763"},"taxonomy":{"scientific_name":"Taeniopygia guttata","id":59729}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Passeriformes","id":9126}}],"confidence":{"value":100,"type":"boostrap"},"taxonomy":{"scientific_name":"Neognathae","id":8825}},{"exon_boundaries":{"boundaries":[28,121,163,191,208,247,270,309,743,2415,2766,2799,2825,3000,3065,3128,3186,3314,3368,3418,3465,3536,3592,3651,3742,3798],"number_of_exons":27},"sequence":{"mol_seq":{"seq":"MENKMADKPVARPTFFEIFKARCSES-DLGPISLNWFEELSTEALPYESE---TSERPEYRAVCLEQSASKTPRGKPFTCSQLASTPVIFKEQSITL---PL--L-SSPIKELGQKKTETGKDSLVNKDHRSSPHFMKTKLDQIS-----PLNTS---LSISSAALRGIYRTPQRN----------NIPVARGSLFCTPK--LLE-VKTPTCISEGLGAEVDPDMSWSSSLATPPTLSATVII-ARGNDSISGAKQHDERIAMVLH----SFFSSHGKRPEKNDVNVLSIPEIVNINAGLDGKDHELEKILDGSFGEMNSLENRSGR---NQI----TQNSLEDGERNEMRIDM-P-DAGEHVLSVCHTSGEHL-QDVTMTNWT-KKTHFDKMATILLQET-NE-IRGNFKDASSVCERELDSPRCEIFTTNMSN---NRIPKLLENRKFTKEDMPSTFTSEWSQLNLSG-LDVTQLEKNSTSDKYSPSSFCNKKRSENKLH-------ANLSTFETSLLNTSSLIK-AEKLLNINWSEHMEDETKNYEKHSTSETSIMHSVDLSVQDPSL-------VKVCAAEKVSEVHFLDCSSFLMENTNF--------TGYTEVCTSCFHKELKELSKSSITDVTSHPVLCNDSIPSNPDGTKWSTNNESTPVRSCLKNTSLLSSLKKRSKRFIYTINNASPRQEEKVKKEIKAGPSIHSASSRLEFESCPFKSPDMVSNDDQ-DLLVS-----SAERKSLKSNSEE-SFMLLSKYATRADRIDNSPNSSLKNKMIHLDI----LKSNRREHQPASSLDCSETSNTLKECLVVSSNS-NNVLSVEHKVIATACLRATKHS-EMDFVRT----EHVVQWPKKDEMEMYGNVNPHNDTVILQTFK----NQLGEPS--SDNEQL-VEIEQEQVSMKNRYFNDT-SI-------NCDIHKHNSVCCNRTKSEDENDATGLLPTDEWKTVTLPPLIIQSNKNSSTTTLIRES--KKDTVQFSKVI-VADQETESIENGDNN--LQTPSNNNMVTIESSE-KLFDHNNCGSLQAVISDKSTLPQLALKIGPEQIVSDFVTKAPEPN-VEDKDFVKKVITFPSK--RVTSD-----KYLYSKNHLCL-DIKSKENPEDKEKWS----------GDTNFNGQCLNKCFG-GFQTASNKQIKVSEKSITKGKMLFKDMEDE-CLKDFSGEG-------------IKNISNQITKKNINIVNNKLDTNYSHGLDSQASLIESKNAQSIV----PESTDSSL--------------------QSLHRNQPH--------QLNQTLTASQEAEITELSNILEETNSQFEFTQFRK----QSNMVQNNS---SQLSGCVDKNETTNLKDISAMWQDTDLDYISETEAQRVNDKSSSKHTDINEESTEMGN-VNEEREIFQKNNCVEFTSTNLCRNANKIPLVSSFSVSTQDNFSNFA------------GFSSAGGK-KINISNEALIRAAKLFSN-------LDAAAADDDDMFKPTEINSRSHYSDRY--KTSRRDVSRCVAEGDS-YCGESVKDA-----NIEYQNTLKN--NEE--NINTFMKIYGENQGENTTN-ISEND--------------------------RVSSS-TKISNLGVIKYS----------VYKMENGLSS-SENNNPSLNISKK-LHESDTQSQYSLQEGLSDLTCLAEVSKTEEILTLNISDD-----PSKSEQKIKNVD-------FRTASSSNRSVSQAPLDKFHLF--ETCTEKELNNISSNSNS--------QMTHSINKKERNATSRKRNINV------NQNKSRIGS-GHQQISIQQDTDFERKNIEENN-------GFHTANGKKIIITDESLSKAKQFFA-EENV------------------------CPENM--------------------------------------------------------------------------------------------------------------------------------------------------------DNIGN---------------------------------------------------------------FEDSEF---------------------------------------------------------HPCNKD---------------------------------------------------------FIK--DCEEF-----------------------------------------------------------AENTPNYDQEM---LTL-----------------------TVGDQ----------GVKFVGPG-----STSALRKSEVVISQK--------RDPKPELISKTTF----------------------------------------------GFNTASGKRVLVSENAFQKVKQVFNN------SKYHFADRLSSRQDPVIALKSSINYAGANK--ATDTVCLKPKIQDTHNEELDLTNSYPVEIKALQNICNIEIPVCVPRSEKDE--HLTLINSFTFAE-DTQLFKKEHHSLTRMEIEAVSCNT----PTKTKLDVFHLKCSQSSEEYLET-EAVESAKAFMED-KFTNS------GIENDTKKSLFICRKI-DKNCPLNIRTGKRH--------MEERASLGEPPIKRQLLPEFDRT-ENPHKS-LKASKSTPDGMIKDRRKFMYHIPLKPETCVP--FSATKERQEIKNPNITVLDQDFKGYKPKSDVFQHHLLRQSLSGS---SGFFTPFKKI--STEESEKR---------KNLPLLSKTAKTFVPPFKVKSAIS-------THQHHVSKRLDSLINTTMNRDKE-------LKDITMQQSTSETEVQSQEKDYTKQVAPCNLRNNVDGDSDLMEMIANLHYVRNLQEMRIRKKQRQNIHPQPGNLYLMKTSAAK-RISLKAAVEEKTPSTYSMEQLYMYGVSKDCIKVNSINAESFQFLILDFFSKEYLVAERGIQLADGGWLIPTDKGMAGKEEFYRALCDTPGVDPKLITEAWVYNHYRWIVWKLAAMEVSFPQEFANRCLTPERVLFQLKY-RYDLEIDKSQRSAIKKIVERDDTPAKTLILCVSKIILLNANM-----PDVCSNKT---IVENKK-EAAIIEVTDGWYCIRALLDPPLQALLHGRRLTVGQKIIVHGAELVGSQDACTPLEIPDSLMLKISANSTRRARWHAKLG--FHQDPRPFPLPLSSLFGEGGTVGCIDIVIQRTYPIQWVEKMPTGSYVFRNGRAEEREAAKHAENRQKHLEALFSQIQMEFEQH-EDKPHKRALRS--HTLT--REQIRILEDGAELYEVIQNASDPSYVE--GYLSEEQLKALNTHRQILNDKKQSEIQAEFKKAIESAEREERGCSKRDVSTVWKLRVIDYRKRETDKAII---LSIWRPLSDICSLLKEGGRYRIYQLTASRSKGKPDAVNCTLTATKKTQYLQLQASQEVLLEIYIPRKALQFSMLLDPSFRPSCAEVDLVGFIISVSKKT------------GFTTLVYLSDEDHNLVAIKFWTDLKQLAIEDIINPFTLISASNLQWRSE----FKSDIPTLFAGDLSIFSASPKDSYLQERLNKLKNTTE-NLSCFCSDAEHKLMKFLQKNSPQQYNLPKECGLDPLSPSWKSG---LDTGNK--PLISSPSSEIKCQSSLSTSKH-DLKLV-LR-------SSAKMTPHISYSKE----SPKNCKKRRKALDLLSQIPSPPPVTPINSFVSP-SLKKAFQPPRSSG-VQ----Y-DASLKRTNHNSD-HINSFKGVNETDSLPNNDLVADEELAMINTQVLLYNFQEGKKTDCVGES-----T-----------------NPSDHLLLKNNCLMSLMETKTSQNSTDGAAALEKD---TRE-------------------TEGSLPVQKKLQRQRKRKCY","is_aligned":1},"location":"JH209329.1:1531099-1613422","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSPSIP00000012858"}]},"branch_length":0.197914,"id":{"source":"EnsEMBL","accession":"ENSPSIG00000011574"},"taxonomy":{"scientific_name":"Pelodiscus sinensis","id":13735}}],"confidence":{"value":86,"type":"boostrap"},"taxonomy":{"scientific_name":"Testudines+Archosauriagroup","id":1329799}},{"exon_boundaries":{"boundaries":[2763,2796,2822,2998,3062,3125,3183,3311,3365,3414,3462,3533,3589,3648,3739,3795],"number_of_exons":17},"sequence":{"mol_seq":{"seq":"----M----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDTIVTQSKPQHRCNAL-----------------------------------------------------------------------------------------------S-LATKNLEKRS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQNLLSTKI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTCV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CDSEKSRNTETKHSTPCNIPRKGNLYSHCH-------------------------------------------------------------------TYSQTPENYLET-EASESARAFMEDDDLTDS------EAERNKKAFASNSEIN---NSYSYARAGKRC--------MEKENTFGEPPIKRKLLPEFDQ----SERSSLKASRSSLDGTMNDRKTNIYGILLKPVNCDS--LSFTK---EVKKPNFTTPGRDLKG-FKSDGPQQHVSKHSSSTS----SCVFKQFSNT--SVREESKK---------TDNPTAKTTIKVFVPPFKTKPSAS--------EDEINSKESYFQNNN--------------SVHGELSNTKVHETFLQPEKEKYEKISAVDSEIREIDLG--LTNIASLHCARNLQEMRILKKQKQVIGPQPGTLYLMKICATSCRIPLKTAVDEKCPGSYFSEQLYAFGVSKQCLNVNSSNAEHFQFHIQDFFGRECFLDGNGIQLADGGYLIPTDDGKAGKEEFYRALCDTPGVDPKLISKAWVYNHYKWIIWKLAAMEVAFPQEFASKCLTPERVLLQLKY-RYDVEVDKSCRSAIKRITERDDVAAKTLVLCISRIISLSSNV-----SCISGNKS---TTEENKKDVAVVEVTDGWYGIKAVLDPSLQSLLHKQKLTVGQKIVVHGAELMGPQDACSPLDVPESLMLKISGNSTRRARWYSTLG--YYRDPRPFTLPLSSLFSDGGIVGCIDVVVQRIYPTQWMEKTSTGSYMFRNCRAEEREAAKHAENKQKTLEALLANIQAEFEKNEETGEGKRVLRS--RTLT--RQQIRSLQDGAELYEAVLNAADPAYME--GYFSEEQLKALNSHRQMVNDKKRAQIEAEFKKAVESAEQDKSSSCSRDVTPVIKVRIVDYRKEEKE--VI---LTIWRPSSHVCTLLKEGCPYRVFHVAASPSKGRAEPTNLQLTATKKTQYLQLPVSQEVLSQVYRPRECLMFSELLLESFRPACSEVDLVGYVVSLRKGT------------GFSTLVYLSDKDHNLIAVHICTDLRQFAVEDIIIPSMLISATNLQWRPK----FYSNIPSLFAGDLSTFSSKPKETRLQEIFNDLRNTVE-SDSCFQKDAERKLATLLQTNVPQVMNLPKEHDFDPFPSPWR-----SDAGNK--HLISTPNTELRLPSPLSIKRP-NTKAPGSL-------CSTKVKADL---QE----TPKNLEKRK-AMDLLSQVPSPPPVKPICTFISP-SLKRAFQPPRSSD-PH----H-ERFLKKTESTV--REPGVKRPNETNFQLENYFVADEELAMINTQAFLSNSTEEKEAGFTEKIAHTSHN-----------------DSSNSFSLRNNSCPSGKDKT------------------------------------------------------------","is_aligned":1},"location":"3:183721796-183749387","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSACAP00000004459"}]},"branch_length":0.37945,"id":{"source":"EnsEMBL","accession":"ENSACAG00000004541"},"taxonomy":{"scientific_name":"Anolis carolinensis","id":28377}}],"confidence":{"value":86,"type":"boostrap"},"taxonomy":{"scientific_name":"Sauria","id":32561}}],"confidence":{"value":98,"type":"boostrap"},"taxonomy":{"scientific_name":"Amniota","id":32524}},{"exon_boundaries":{"boundaries":[28,121,163,191,209,246,270,305,713,2642,2657,2683,2709,2725,2791,3001,3066,3129,3187,3315,3369,3418,3466,3537,3593,3652,3743,3812],"number_of_exons":29},"sequence":{"mol_seq":{"seq":"----MAAPQLGKSVFYDLFSTHCSHS-DLGPISLNWFEELTAEALPYKSR---TCEDHECSLDDLHENNIKTPKLKSSIYSQLDSTPVIFKER-LLS---PL--F-ASSLTELDKRQNATDNG--NNVRLEKSNCT---QMQHQASEVFSPSSRC---LNESPAVIKEIFKTPLRNKYLHKTPQCDWKPDICSSLFCTPK--LMK--NQTGCIKESLGAEVDPEMSWSSSLATPP--SPTVIIAHANDQPSGNKH------AAIVQ----SLFPNCEN--MEANNLPPPETGTQNEDRQICAGLEKPGSCSASKTVPEASAISSRAAWKKT------VANTVKDEEVSRTVENALEGMEDVLSIFFASEKTPGL-RKLKNST--QARRKVESIKS---QKC-QV-SLFKAEEGESILVPLDEHHKCDHEMLMKPE---QDYKMNAVNQKIAKETTP----YEWSQLNICE-LDITQSQDST----LHAANLCCEDIT----VNKSDTCNITEAEKQEEVNEPS-----TDNVLSNKVGKESTLNVNCINADLNNMASSS-------------------NNSVHSLNLSQCEKMDSSEISNSE---------------VGCITKLTTHPAKITTGELSSVDDCAKKPQERVTISTSFSTLKKQSKFMYSVNTVLTGHIASNTSIATRR---SLNSHLSSDEPKPHIKENQNEPESNA----KYYSNGLQKPVFLEKEND-----N-----KGISLCKTISDGQNTSEGARAPDYFEERVPETKDRCKATLSIREKVVATANCFARKQLETDYPEDASAQHEALQFHAKQYVSCSMLNSNVSNDMQIKPQVLTQACDFRSSAENLV-----------EKTKNQLRRNEDQSFSSTGIGKK----PASGEKLVGDCNEGSFLHVKQEISAAQALVGNGYETR-------DTPDVTSDHTRSVISNHGKSLWEEETALTELPVPEILSKTFKGFKTASNKKIHISDKNIVKGCDLFKEIEFGIGDAKPCNEENKEPLKKTPFDVPGYETNLKGFKTASNKEINVSENKFAKGRLLF--KDIEEESGQTTAIMAKDNELFIKPASSNKPDIFKSTCIKGMNPSEN-----LDSMPPKKGDVQQSAGLKHSDQIDVFGFDDPPAKGNVQTLGYFNMSASETDFKGFKTASNKDIIISESTLAKGKLIFEDIEDTRYSETGRTIDCKAKGGALSTSNLVMHNTMCKNEPSTSENTNDKAPKRAKVQTPMAENSHLKEPSSDKNAMDAANHQMTLKASAYSPKAASSALPRYKKKPISTTKTSF--------QLNEHLTESQQAEISELSSILENADSQFDFTQFRK---VPSVTEKQNS---------TEGGSESQNLNNSDVWKDVDFNDSFAAGRDHSEGMEAIPSSPGIKELPSAGECCSKETHDSMPDFVTLAPKQGFLVKQNER---------------LFA------------GFNLASGK-QVNIDNDVLKKAAELFND-------IDNDKEL----LSHAKEESRKSNIKHS---------------SKLINNENCGKTE-----HTSEHLVCQS--NVS----------------------------------------------------------------------------------------LPF-----IKTLGKNATILVSGNEK----SQNQELQLDCL----KCESTDVKHTPQKE-TINDNSKCNESSLSELSMK--GFQTASGRNIMMSESSIQKARNIFAEEHEDSF------------------TLRCNIQNTIQIPQPVNEPTQFPYVNLGPKPTTTSGWQEKNILR---------RSTEKGFMP-----GFCTAGGKKVSVSDNSLAKAHKLFQEECTFSKEGKLDEVKQNKLMNSEPLSL--------LTCESVLKQSDGFIEDISTSRNAL------------EIRPELYPEGMCSNR----------ASNGS---------------------------GNNSEFTAGEGISININQSSLLTTGNVLKNLPSESSGHDVYSVTE-----------------------------------------------------------------------HLSTVVKVKRYNDSGHFVNQNLAECNDNHVLSTQKNTA-----------------------------NISNRNEDCTSLA---------------------P----------LSFSTASGKSVTVSHDSLQKARLMLSE--------AANDVTVDTSKQEAAYITPAIRKTEAEKEQNT--VDDSDRVNANTFSFSTASGKKVNISGNSLKQVRAV---CLSSDPKETSAALFNVEKSVFNEDVKDVSLLQPNVTMPKAVS-FSTASGKTVQLSDESLKKARVIFSEI-DTCPLMQQQTNESTVEEIVIGGGMTKSKQMPLTTEKVETTRK---------------NNGT----FGFNTASGKQVSVSESALQKVKDIFQEFD---------------------------DPDNYEQNKSLVRLPVSSKIKESTPGTKRLVQTAGSSYKNDNLQCKAGNLRTFQDKQAGKKSLTYSEAAISPIESSVPIYEM-QVMLKHTNNQACKYQPRVEVPLQ----------DQRWQNILEIELPATCAPAFRETHNILFF------GDLQHSTHFDICSLYSGKNPAVKHQLASHSK--------MQTLVISG---------RDSSGTLTLQFTLRIVILHTVNNQYSLNKQLFTFSSALRQVTCIP------------TQAHLHSKVKIF-----------HQSLPIKSPDV--ASDSTSKSYS---PTAAKETI---------NCSSASKIPAKKFVPPFKKTVATL-------AD----------------------------NQSNSVQNGSSDGLIESIVYPKEDKVETICSSKDQFDDSDILQMTSNLRCSKDLQEMRIRKKLRQKIKPHPGSLYRLKMSHVK-RISLQSAVAERCPTLYSREQLYRYGIVKNHIGVSSENALSFQFHCSNYFTKELLLSGNGVQLADGGWLIPTEQGNAGKEEIYRAFCDTPGVDPKLISAEWVHNHYRWIVWKLAAMEVRFPKTFACRCLTPERVLLQLKY-RYDVEIDKSQRSAIKKIMERDDSPAKTLVLCIAKIISQGTRL-----PNACSNKT---EPADSKESSAVIEVTDSWYGIKVLLDPCLTALLHKGRLFIGQKLIVHGAELIGSDDACSPLEAPESLMLKIAANSTRPVRWHTKLG--YFKDPRPFCLHLSSLLSEGGVVGCVDVVIQRIYPMQWMEKMANGLYVFRNDRAEEREAEKHSANQQKKLEMLFSKIQAEFEQREVTCNRRKGLRR--RSLN--AQQMQTLQDGAEIYEAIQNESDPGYLE--SYLSAEQLKALNHHRQLLNDKKQALIQAEFRKAIECSEQDANGCTRRDVTPVWKLRIADYRNYETDAAYI---LNIWRPLPDVLSLLKEGCRYKMYHLAASTSKGKSLAADLQLTATKKTRFQQLQLSESILEQIYSPREVTDFSRFQEPLFSAPYAEVDLVGLIISIYKKT------------GAAPVVYISDESHNIVALKFWTDLGQLGLEEITKPRTYISASNLRWRSD----CIEGIPTLYVGDLANISSNPKESHLQRAIQKLKLSVQ-NVQDFWNSSQTALMKTLQIN----STDTTECSKNPTTPTWK----------------SDVSARSGYLTPLHHSG--KRLLNSVH-------TSDPQTENPGCSKEIQL---KTCKKRK-ALDFLNRIPSPPPVTPVRPFVSP-SLQKAFRPPRSCS-VQ----K-LGPETKGNTENV-QGTTPECTKDL-AKLEGEFVADEELAMINTQALLLGLEEEKKKTE-QKTSRTAGK-----------------MTAHESPIENASPVPAQEQQTEEALNIPVGNSEKSYLCLRKRKRK-----------------------------------","is_aligned":1},"location":"GL172716.1:1071058-1096238","name":"brca2-201","id":[{"source":"EnsEMBL","accession":"ENSXETP00000060681"}]},"branch_length":0.781668,"id":{"source":"EnsEMBL","accession":"ENSXETG00000017011"},"taxonomy":{"scientific_name":"Xenopus tropicalis","id":8364}}],"confidence":{"value":3,"type":"boostrap"},"taxonomy":{"scientific_name":"Tetrapoda","id":32523}},{"exon_boundaries":{"boundaries":[2725,2740,2763,2796,2821,2930,2997,3062,3125,3183,3227,3311,3365,3415,3462,3533,3589,3648,3738,3741,3762,3791,3797],"number_of_exons":24},"sequence":{"mol_seq":{"seq":"----M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAVESVKALMRDDELTDA------GLDASKDSLNRACRRQ----SGGNFRARKRM--------RLEQVSADEPPVKRQLLAEFDRTVENGHKSLQKPLICTPNGTLKDRRKFMYSVPLKPVVCGP-WSNNSKTGQQVTKPSITLPGRGVETFQPKNHIAPSPVYDPPSNRR--GPVFAPPFHGA--TFRGLQKP---------SASHTSSKTAKTFVPPFKMKASAS-------HTVHFSSKVINTCEKIL-------------ENLVYLKPSLASCNIFQS----------------------LEEMTANLQCARDLQEMRLRKKQRQNIRPQPGSLYLAKTSGVA-RVSLKAATGNQCPSSYSTEQLYVHGVGKSTLKVRSENAESFQFSCSDYFGKDVLLAGNGLKLADGGWLIPSDKGMVGKEEFYRALCDTPGVAPKLISESWVYNHYRWIVWKLAAMEAAFPKEFGNRCLTPERVLLQLKY-RYDIEVDKCRRSTVKKIMERDDTAAKTLVLCISKLISVEDRF-----KQTKNKNEKGAEEARKEAVAGVIETTDGWYGIKVLLDPPLTVLVQRGRLSVGCKIITHGAEIIGSQDACTPLEAPECLMLKISANSTRPACWSAKLG--FHRDPRPFPLPLASLFNDGGLVGCVDVVVVRLYPIQWMEKKSDGIFVFRNDRAEEREAQRQVENQQRKMESLFAKIQTEFEQKYEAKSKRRGQKA--QKFS--KQEIQALQDGAELNEAIENSMDPGYFE--ACLREEQLKVLHGHRQMLNEKKQAEFQAEFKKALESAEQEGKSCCKRGVTPVWKLRIVDYRKPSAA-EYI---LNIWRPLADLHSLLKEGNRYRIYQLLASQSKGRTTTADIQLTATKKTQYQQFQSFPELISELYSPRKAVKFNMLMDPTFRPAYAEVDLVGYTISIEGKP------------GVAPVVYLSDESHNFVAIKVWTALNQLAVEDIVKPFSLIAASNLQWRSD----SRSIIPMLYAGDLSIFSSNPKEGHLQEAFNQRRTAIQENISGTYLPPEKKNLHQESYKSCQYNTLNVLMNGNIHTQSPVLSRVHMGTSCAFLFLLPSPYPESKHTSPLITMKA-GVKSMTFP-------GSAKLMPQA--SENQELDTPKNRKKKA-ALDYLCRIPSPPALTPIRSFVSS-SLQKAFHPPRSCVKLQ----SGENPVVPTVGNNAVLGIQSKKDEGPAAFNEEDSVADEELAMINTQAFLVGLRRDKRPSLLDKTASLKGHVPSERFLEEKLLS----VLKEQASSNSERNATSLENKSCDKSRTCVKPCEHSNDSIAEETSEIIPGCHGGESAVENQSKNSSLCHKKLQQKKRRKYY","is_aligned":1},"location":"JH127744.1:299190-332700","name":"BRCA2-201","id":[{"source":"EnsEMBL","accession":"ENSLACP00000008815"}]},"branch_length":0.317193,"id":{"source":"EnsEMBL","accession":"ENSLACG00000007788"},"taxonomy":{"scientific_name":"Latimeria chalumnae","id":7897}}],"confidence":{"value":3,"type":"boostrap"},"taxonomy":{"scientific_name":"Sarcopterygii","id":8287}}],"taxonomy":{"scientific_name":"Euteleostomi","id":117571}},"rooted":1,"id":"ENSGT00390000003602","type":"gene tree"}
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