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Last active August 29, 2015 14:14
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README.md

This simple force-directed graph shows character co-occurence in Les Misérables. A physical simulation of charged particles and springs places related characters in closer proximity, while unrelated characters are farther apart. Layout algorithm inspired by Tim Dwyer and Thomas Jakobsen. Data based on character coappearence in Victor Hugo's Les Misérables, compiled by Donald Knuth.

Compare this display to a force layout with curved links, a force layout with fisheye distortion and a matrix diagram.

Raw
index.html
<!DOCTYPE html>
<meta charset="utf-8">
<style>
.node {
stroke: #fff;
stroke-width: 1.5px;
}
.link {
stroke: #999;
stroke-opacity: .6;
}
</style>
<body>
<script src="http://d3js.org/d3.v3.min.js"></script>
<script>
var width = 960,
height = 500;
var color = d3.scale.category20();
var force = d3.layout.force()
.charge(-120)
.linkDistance(30)
.size([width, height]);
var svg = d3.select("body").append("svg")
.attr("width", width)
.attr("height", height);
d3.json("miserables.json", function(error, graph) {
force
.nodes(graph.nodes)
.links(graph.links)
.start();
var link = svg.selectAll(".link")
.data(graph.links)
.enter().append("line")
.attr("class", "link")
.style("stroke-width", function(d) { return Math.sqrt(d.value); });
var node = svg.selectAll(".node")
.data(graph.nodes)
.enter().append("circle")
.attr("class", "node")
.attr("r", 5)
.style("fill", function(d) { return color(d.group); })
.call(force.drag);
node.append("title")
.text(function(d) { return d.name; });
force.on("tick", function() {
link.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
node.attr("cx", function(d) { return d.x; })
.attr("cy", function(d) { return d.y; });
});
});
</script>
Raw
miserables.json
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"name": "MhA1Contig715frz3gene15"
},
{
"group": "2",
"name": "X71CUFF115"
},
{
"group": "2",
"name": "MhA1Contig72frz3gene1"
},
{
"group": "2",
"name": "X720CUFF1914"
},
{
"group": "2",
"name": "MhA1Contig762frz3gene3"
},
{
"group": "2",
"name": "MhA1Contig762frz3gene4"
},
{
"group": "2",
"name": "X552CUFF118"
},
{
"group": "2",
"name": "MhA1Contig765frz3fgene1"
},
{
"group": "2",
"name": "MhA1Contig78frz3gene36"
},
{
"group": "2",
"name": "X346CUFF2011"
},
{
"group": "2",
"name": "MhA1Contig803frz3gene8"
},
{
"group": "2",
"name": "X1928CUFF119"
},
{
"group": "2",
"name": "MhA1Contig820frz3gene3"
},
{
"group": "2",
"name": "MhA1Contig820frz3gene2"
},
{
"group": "2",
"name": "X3011CUFF217"
},
{
"group": "2",
"name": "MhA1Contig999frz3gene11"
},
{
"group": "2",
"name": "X873CUFF119"
},
{
"group": "2",
"name": "MhA1Contig88frz3gene16"
},
{
"group": "2",
"name": "MhA1Contig919frz3gene10"
},
{
"group": "2",
"name": "MhA1Contig919frz3gene9"
},
{
"group": "2",
"name": "MhA1Contig919frz3gene12"
},
{
"group": "2",
"name": "X47CUFF211"
},
{
"group": "2",
"name": "MhA1Contig923frz3gene4"
},
{
"group": "2",
"name": "MhA1Contig923frz3gene6"
},
{
"group": "2",
"name": "MhA1Contig95frz3gene18"
},
{
"group": "2",
"name": "MhA1Contig95frz3gene19"
},
{
"group": "2",
"name": "MhA1Contig990frz3gene6"
},
{
"group": "2",
"name": "X1002CUFF412"
},
{
"group": "2",
"name": "X26CUFF311"
},
{
"group": "2",
"name": "X1005CUFF413"
},
{
"group": "2",
"name": "X1018CUFF13292"
},
{
"group": "2",
"name": "X1723CUFF61109"
},
{
"group": "2",
"name": "X433CUFF611"
},
{
"group": "2",
"name": "X121CUFF3211"
},
{
"group": "2",
"name": "X1233CUFF3114"
},
{
"group": "2",
"name": "X611CUFF223"
},
{
"group": "2",
"name": "X1344CUFF219"
},
{
"group": "2",
"name": "X1400CUFF611"
},
{
"group": "2",
"name": "X319CUFF1119"
},
{
"group": "2",
"name": "X1616CUFF1111"
},
{
"group": "2",
"name": "X1616CUFF1112"
},
{
"group": "2",
"name": "X818CUFF821"
},
{
"group": "2",
"name": "X413CUFF421"
},
{
"group": "2",
"name": "X413CUFF321"
}
]
}
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