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| # Add repo to install the last R | |
| sudo apt install apt-transport-https software-properties-common | |
| sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E298A3A825C0D65DFD57CBB651716619E084DAB9 | |
| sudo add-apt-repository 'deb https://cloud.r-project.org/bin/linux/ubuntu eoan-cran35/' | |
| # Install R | |
| sudo apt update | |
| sudo apt install gdebi libxml2-dev libssl-dev libcurl4-openssl-dev libopenblas-dev r-base r-base-dev | |
| # Install RStudio | |
| cd ~/Downloads | |
| wget https://download1.rstudio.org/desktop/bionic/amd64/rstudio-1.2.5001-amd64.deb | |
| sudo gdebi rstudio-1.2.5001-amd64.deb | |
| # I really don't know if this is necessary anymore. | |
| test -r ~/.bash_profile && printf '\nexport QT_STYLE_OVERRIDE=gtk\n' | sudo tee -a ~/.bash_profile | |
| test -r ~/.zshrc && printf '\nexport QT_STYLE_OVERRIDE=gtk\n' | sudo tee -a ~/.zshrc | |
| printf '\nexport QT_STYLE_OVERRIDE=gtk\n' | sudo tee -a ~/.profile | |
| # Install common packages | |
| R --vanilla << EOF | |
| install.packages(c("tidyverse","data.table","dtplyr","devtools","roxygen2","bit64","readr"), repos = "https://cran.rstudio.com/") | |
| q() | |
| EOF | |
| # Install TDD packages | |
| R --vanilla << EOF | |
| install.packages("testthis") | |
| q() | |
| EOF | |
| # Export to HTML/Excel | |
| R --vanilla << EOF | |
| install.packages(c("htmlTable","openxlsx"), repos = "https://cran.rstudio.com/") | |
| q() | |
| EOF | |
| # Blog tools | |
| R --vanilla << EOF | |
| install.packages(c("knitr","rmarkdown"), repos='http://cran.us.r-project.org') | |
| q() | |
| EOF | |
| sudo apt install python-pip | |
| sudo apt install python3-pip | |
| sudo -H pip install markdown rpy2==2.7.1 pelican==3.7.1 | |
| sudo -H pip3 install markdown rpy2==2.9.3 pelican==3.7.1 | |
| # PDF extraction tools | |
| sudo apt install libpoppler-cpp-dev default-jre default-jdk r-cran-rjava | |
| sudo R CMD javareconf | |
| R --vanilla << EOF | |
| library(devtools) | |
| install.packages("pdftools", repos = "https://cran.rstudio.com/") | |
| install_github("ropensci/tabulizer") | |
| q() | |
| EOF | |
| # TTF/OTF fonts usage | |
| sudo apt install libfreetype6-dev | |
| R --vanilla << EOF | |
| install.packages("showtext", repos = "https://cran.rstudio.com/") | |
| q() | |
| EOF | |
| # Cairo for graphic devices | |
| sudo apt install libgtk2.0-dev libxt-dev libcairo2-dev | |
| R --vanilla << EOF | |
| install.packages("Cairo", repos = "https://cran.rstudio.com/") | |
| q() | |
| EOF | |
| # Texlive for Latex/knitr | |
| sudo apt -y install texlive | |
| sudo apt -y install texlive-latex-recommended texlive-pictures texlive-latex-extra |
@elibooklover Sorry, as far as I can remember I didn't have any. What kind of issue?
Works great on POP!_OS too. Thanks
I've got unmet dependencies as following:
r-base : Depends: r-base-core (>= 3.6.3-1bionic) but it is not going to be installed
Depends: r-recommended (= 3.6.3-1bionic) but it is not going to be installed
Recommends: r-base-html but it is not going to be installed
r-base-dev : Depends: r-base-core (>= 3.6.3-1bionic) but it is not going to be installed
E: Unable to correct problems, you have held broken packages.
Any help is appreciated.
@ferreirafm
What version are you using of Ubuntu?
@luispuerto
root@krusty:~# lsb_release -a
No LSB modules are available.
Distributor ID: Ubuntu
Description: Ubuntu 19.10
Release: 19.10
Codename: eoan
try again…
just installing...
tks
The following packages have unmet dependencies:
r-base : Depends: r-base-core (>= 3.6.3-1bionic) but it is not going to be installed
Depends: r-recommended (= 3.6.3-1bionic) but it is not going to be installed
Recommends: r-base-html but it is not going to be installed
r-base-dev : Depends: r-base-core (>= 3.6.3-1bionic) but it is not going to be installed
E: Unable to correct problems, you have held broken packages.
OS:Ubuntu 19.10
It fixed after editing sources.list sudo gedit /etc/apt/sources.list file and removing added cran repository, I mean this line deb https://cloud.r-project.org/bin/linux/ubuntu bionic-cran35/;
You perhaps have to change the last part of sudo add-apt-repository 'deb https://cloud.r-project.org/bin/linux/ubuntu eoan-cran35/' in relation of your ubuntu version. If you don't have the last version —eoan— will fail.
My Ubuntu version is 19.10, What was I supposed to do?
How can I find a related repository link?
@mberneti I just put it. Your version it eoan.
@luispuerto oops ...
Thank you.
Thanks for the code! I have an issue to install "devtools" in Ubuntu 19.10. Any advice?