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| { | |
| "$schema": "https://vega.github.io/schema/vega/v3.0.json", | |
| "description": "Hsd Vega Specification", | |
| "width": 800, | |
| "height": 800, | |
| "padding": 5, | |
| "autosize": "pad", | |
| "data": [ | |
| { | |
| "name": "rawData", | |
| "format": { | |
| "type": "csv", | |
| "parse": { | |
| "NodeLevel": "number", | |
| "SubtreeLevel": "number", | |
| "NumberOfPaths": "number" | |
| } | |
| }, | |
| "transform": [ | |
| { | |
| "type": "project", | |
| "fields": [ | |
| "NodeLevel", | |
| "NodePath", | |
| "SubtreeLevel", | |
| "ConceptType", | |
| "Visibility", | |
| "NumberOfPaths" | |
| ], | |
| "as": [ | |
| "level", | |
| "path", | |
| "subtreeLevel", | |
| "type", | |
| "visibility", | |
| "numPaths" | |
| ] | |
| } | |
| ], | |
| "values": 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Leaf,Inactive,N,concept_dimension,N,4508\n1,\\PCORI\\DIAGNOSIS\\,9,Leaf,Inactive,Y,concept_dimension,N,7211\n1,\\PCORI\\DIAGNOSIS\\,10,Leaf,Inactive,N,concept_dimension,N,6944\n1,\\PCORI\\DIAGNOSIS\\,10,Leaf,Inactive,Y,concept_dimension,N,9544\n1,\\PCORI\\DIAGNOSIS\\,11,Leaf,Inactive,N,concept_dimension,N,19\n2,\\PCORI\\DIAGNOSIS\\09\\,3,Folder,Active,N,concept_dimension,N,3\n2,\\PCORI\\DIAGNOSIS\\09\\,4,Folder,Active,N,concept_dimension,N,55\n2,\\PCORI\\DIAGNOSIS\\09\\,4,Leaf,Active,N,concept_dimension,N,1\n2,\\PCORI\\DIAGNOSIS\\09\\,5,Folder,Active,N,concept_dimension,N,364\n2,\\PCORI\\DIAGNOSIS\\09\\,5,Leaf,Active,N,concept_dimension,N,54\n2,\\PCORI\\DIAGNOSIS\\09\\,6,Folder,Active,N,concept_dimension,N,1036\n2,\\PCORI\\DIAGNOSIS\\09\\,6,Leaf,Active,N,concept_dimension,N,1597\n2,\\PCORI\\DIAGNOSIS\\09\\,7,Folder,Active,N,concept_dimension,N,1591\n2,\\PCORI\\DIAGNOSIS\\09\\,7,Leaf,Active,N,concept_dimension,N,4882\n2,\\PCORI\\DIAGNOSIS\\09\\,8,Folder,Active,N,concept_dimension,N,145\n2,\\PCORI\\DIAGNOSIS\\09\\,8,Leaf,Active,N,concept_dimension,N,7268\n2,\\PCORI\\DIAGNOSIS\\09\\,9,Leaf,Active,N,concept_dimension,N,867\n2,\\PCORI\\DIAGNOSIS\\10\\,3,Case,Active,N,concept_dimension,N,21\n2,\\PCORI\\DIAGNOSIS\\10\\,4,Folder,Active,N,concept_dimension,N,279\n2,\\PCORI\\DIAGNOSIS\\10\\,4,Folder,Active,Y,concept_dimension,N,92\n2,\\PCORI\\DIAGNOSIS\\10\\,4,Leaf,Inactive,N,concept_dimension,N,3\n2,\\PCORI\\DIAGNOSIS\\10\\,5,Folder,Active,N,concept_dimension,N,1821\n2,\\PCORI\\DIAGNOSIS\\10\\,5,Folder,Active,Y,concept_dimension,N,1128\n2,\\PCORI\\DIAGNOSIS\\10\\,5,Leaf,Active,N,concept_dimension,N,82\n2,\\PCORI\\DIAGNOSIS\\10\\,5,Leaf,Active,Y,concept_dimension,N,56\n2,\\PCORI\\DIAGNOSIS\\10\\,5,Leaf,Inactive,N,concept_dimension,N,108\n2,\\PCORI\\DIAGNOSIS\\10\\,5,Leaf,Inactive,Y,concept_dimension,N,66\n2,\\PCORI\\DIAGNOSIS\\10\\,6,Folder,Active,N,concept_dimension,N,6821\n2,\\PCORI\\DIAGNOSIS\\10\\,6,Folder,Active,Y,concept_dimension,N,3960\n2,\\PCORI\\DIAGNOSIS\\10\\,6,Leaf,Active,N,concept_dimension,N,3203\n2,\\PCORI\\DIAGNOSIS\\10\\,6,Leaf,Active,Y,concept_dimension,N,1963\n2,\\PCORI\\DIAGNOSIS\\10\\,6,Leaf,Inactive,N,concept_dimension,N,1396\n2,\\PCORI\\DIAGNOSIS\\10\\,6,Leaf,Inactive,Y,concept_dimension,N,2486\n2,\\PCORI\\DIAGNOSIS\\10\\,7,Folder,Active,N,concept_dimension,N,8005\n2,\\PCORI\\DIAGNOSIS\\10\\,7,Folder,Active,Y,concept_dimension,N,2114\n2,\\PCORI\\DIAGNOSIS\\10\\,7,Leaf,Active,N,concept_dimension,N,8519\n2,\\PCORI\\DIAGNOSIS\\10\\,7,Leaf,Active,Y,concept_dimension,N,1050\n2,\\PCORI\\DIAGNOSIS\\10\\,7,Leaf,Inactive,N,concept_dimension,N,6559\n2,\\PCORI\\DIAGNOSIS\\10\\,7,Leaf,Inactive,Y,concept_dimension,N,23440\n2,\\PCORI\\DIAGNOSIS\\10\\,8,Folder,Active,N,concept_dimension,N,9368\n2,\\PCORI\\DIAGNOSIS\\10\\,8,Folder,Active,Y,concept_dimension,N,592\n2,\\PCORI\\DIAGNOSIS\\10\\,8,Leaf,Active,N,concept_dimension,N,15677\n2,\\PCORI\\DIAGNOSIS\\10\\,8,Leaf,Active,Y,concept_dimension,N,498\n2,\\PCORI\\DIAGNOSIS\\10\\,8,Leaf,Inactive,N,concept_dimension,N,5993\n2,\\PCORI\\DIAGNOSIS\\10\\,8,Leaf,Inactive,Y,concept_dimension,N,9969\n2,\\PCORI\\DIAGNOSIS\\10\\,9,Folder,Active,N,concept_dimension,N,61\n2,\\PCORI\\DIAGNOSIS\\10\\,9,Leaf,Active,N,concept_dimension,N,38180\n2,\\PCORI\\DIAGNOSIS\\10\\,9,Leaf,Inactive,N,concept_dimension,N,4508\n2,\\PCORI\\DIAGNOSIS\\10\\,9,Leaf,Inactive,Y,concept_dimension,N,7211\n2,\\PCORI\\DIAGNOSIS\\10\\,10,Leaf,Inactive,N,concept_dimension,N,6944\n2,\\PCORI\\DIAGNOSIS\\10\\,10,Leaf,Inactive,Y,concept_dimension,N,9544\n2,\\PCORI\\DIAGNOSIS\\10\\,11,Leaf,Inactive,N,concept_dimension,N,19\n2,\\PCORI\\DIAGNOSIS\\11\\,,,,,,,\n2,\\PCORI\\DIAGNOSIS\\RAW_DX\\,,,,,,,\n2,\\PCORI\\DIAGNOSIS\\RAW_DX_SOURCE\\,,,,,,,\n2,\\PCORI\\DIAGNOSIS\\RAW_DX_TYPE\\,,,,,,,\n2,\\PCORI\\DIAGNOSIS\\RAW_PDX\\,,,,,,,\n2,\\PCORI\\DIAGNOSIS\\SM\\,,,,,,,\n2,\\PCORI\\DIAGNOSIS\\VERSION\\,,,,,,,\n1,\\PCORI\\ENCOUNTER\\,2,Case,Active,N,concept_dimension,N,5\n1,\\PCORI\\ENCOUNTER\\,2,Case,Active,N,visit_dimension,N,1\n1,\\PCORI\\ENCOUNTER\\,2,Folder,Active,N,concept_dimension,N,1\n1,\\PCORI\\ENCOUNTER\\,2,Leaf,Hidden,N,visit_dimension,Y,9\n1,\\PCORI\\ENCOUNTER\\,2,Leaf,Inactive,N,visit_dimension,N,1\n1,\\PCORI\\ENCOUNTER\\,2,Leaf,Inactive,N,visit_dimension,Y,2\n1,\\PCORI\\ENCOUNTER\\,3,Folder,Active,N,concept_dimension,N,2\n1,\\PCORI\\ENCOUNTER\\,3,Folder,Active,N,visit_dimension,N,72\n1,\\PCORI\\ENCOUNTER\\,3,Leaf,Active,N,concept_dimension,N,2\n1,\\PCORI\\ENCOUNTER\\,3,Leaf,Active,N,visit_dimension,N,42\n1,\\PCORI\\ENCOUNTER\\,3,Leaf,Inactive,N,concept_dimension,N,1\n1,\\PCORI\\ENCOUNTER\\,3,Leaf,Inactive,N,visit_dimension,N,4\n1,\\PCORI\\ENCOUNTER\\,4,Folder,Active,N,concept_dimension,N,54\n1,\\PCORI\\ENCOUNTER\\,4,Leaf,Active,N,visit_dimension,N,1047\n1,\\PCORI\\ENCOUNTER\\,5,Folder,Active,N,concept_dimension,N,51\n1,\\PCORI\\ENCOUNTER\\,5,Leaf,Active,N,concept_dimension,N,749\n1,\\PCORI\\ENCOUNTER\\,6,Folder,Active,N,concept_dimension,N,2\n1,\\PCORI\\ENCOUNTER\\,6,Leaf,Active,N,concept_dimension,N,659\n1,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| |
| }, | |
| { | |
| "name": "levelExtentCalculationData", | |
| "source": "rawData", | |
| "transform": [ | |
| { | |
| "type": "filter", | |
| "expr": "datum.subtreeLevel != null" | |
| }, | |
| { | |
| "type": "extent", | |
| "field": "subtreeLevel", | |
| "signal": "rawLevelExtent" | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "levelTotals", | |
| "source": "rawData", | |
| "transform": [ | |
| { | |
| "type": "aggregate", | |
| "groupby": [ | |
| "level", | |
| "path", | |
| "subtreeLevel" | |
| ], | |
| "fields": [ | |
| "numPaths" | |
| ], | |
| "ops": [ | |
| "sum" | |
| ], | |
| "as": [ | |
| "levelTotal" | |
| ] | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "nodes", | |
| "source": "rawData", | |
| "transform": [ | |
| { | |
| "type": "aggregate", | |
| "groupby": [ | |
| "level", | |
| "path" | |
| ] | |
| }, | |
| { | |
| "type": "formula", | |
| "expr": "lastindexof(slice(datum.path, 0, -1), '\\\\')", | |
| "as": "pathSplitIndex" | |
| }, | |
| { | |
| "type": "formula", | |
| "expr": "slice(datum.path, 0, datum.pathSplitIndex)", | |
| "as": "rawParentPath" | |
| }, | |
| { | |
| "type": "formula", | |
| "expr": "if(datum.rawParentPath != '', datum.rawParentPath + '\\\\', null)", | |
| "as": "parentPath" | |
| }, | |
| { | |
| "type": "project", | |
| "fields": [ | |
| "level", | |
| "path", | |
| "parentPath" | |
| ] | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "leafs", | |
| "source": "nodes", | |
| "transform": [ | |
| { | |
| "type": "filter", | |
| "expr": "!indata('nodes', 'parentPath', datum.path)" | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "leafCountCalculationData", | |
| "source": "leafs", | |
| "transform": [ | |
| { | |
| "type": "aggregate", | |
| "as": [ | |
| "count" | |
| ] | |
| }, | |
| { | |
| "type": "extent", | |
| "field": "count", | |
| "signal": "rawLeafCount" | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "subleafs", | |
| "source": "levelTotals", | |
| "transform": [ | |
| { | |
| "type": "filter", | |
| "expr": "datum.subtreeLevel != null" | |
| }, | |
| { | |
| "type": "lookup", | |
| "from": "leafs", | |
| "key": "path", | |
| "fields": [ | |
| "path" | |
| ], | |
| "as": [ | |
| "node" | |
| ] | |
| }, | |
| { | |
| "type": "filter", | |
| "expr": "datum.node != null" | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "tree", | |
| "source": "nodes", | |
| "transform": [ | |
| { | |
| "type": "stratify", | |
| "key": "path", | |
| "parentKey": "parentPath" | |
| }, | |
| { | |
| "type": "tree", | |
| "size": [ | |
| { | |
| "signal": "height" | |
| }, | |
| { | |
| "signal": "width" | |
| } | |
| ] | |
| }, | |
| { | |
| "type": "formula", | |
| "expr": "datum.x", | |
| "as": "y" | |
| }, | |
| { | |
| "type": "formula", | |
| "expr": "datum.level * 800 / 11", | |
| "as": "x" | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "links", | |
| "source": "tree", | |
| "transform": [ | |
| { | |
| "type": "treelinks", | |
| "key": "path" | |
| }, | |
| { | |
| "type": "linkpath", | |
| "orient": "horizontal" | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "subleafWithPosition", | |
| "source": "subleafs", | |
| "transform": [ | |
| { | |
| "type": "lookup", | |
| "from": "tree", | |
| "key": "path", | |
| "fields": [ | |
| "path" | |
| ], | |
| "values": [ | |
| "y" | |
| ] | |
| }, | |
| { | |
| "type": "formula", | |
| "expr": "datum.subtreeLevel * 800 / 11", | |
| "as": "x" | |
| } | |
| ] | |
| }, | |
| { | |
| "name": "subleafLinks", | |
| "source": "subleafWithPosition", | |
| "transform": [ | |
| { | |
| "type": "formula", | |
| "expr": "'M' + (datum.x - 800 / 11) + ',' + datum.y + 'L' + datum.x + ',' + datum.y", | |
| "as": "linkPath" | |
| } | |
| ] | |
| } | |
| ], | |
| "signals": [ | |
| { | |
| "name": "levelSequence", | |
| "description": "A sequence of integers up to # of levels. I.e. [0,n].", | |
| "update": "sequence(0, peek(rawLevelExtent) + 1)" | |
| }, | |
| { | |
| "name": "leafCount", | |
| "description": "The number of leaf nodes in the tree.", | |
| "update": "rawLeafCount[0]" | |
| } | |
| ], | |
| "scales": [ | |
| { | |
| "name": "levels", | |
| "type": "point", | |
| "domain": { | |
| "signal": "levelSequence" | |
| }, | |
| "range": "width" | |
| } | |
| ], | |
| "projections": [], | |
| "axes": [ | |
| { | |
| "scale": "levels", | |
| "orient": "top" | |
| } | |
| ], | |
| "legends": [], | |
| "marks": [ | |
| { | |
| "type": "path", | |
| "from": { | |
| "data": "links" | |
| }, | |
| "encode": { | |
| "update": { | |
| "path": { | |
| "field": "path" | |
| }, | |
| "stroke": { | |
| "value": "#ccc" | |
| } | |
| } | |
| } | |
| }, | |
| { | |
| "type": "path", | |
| "from": { | |
| "data": "subleafLinks" | |
| }, | |
| "encode": { | |
| "update": { | |
| "path": { | |
| "field": "linkPath" | |
| }, | |
| "stroke": { | |
| "value": "#ccc" | |
| } | |
| } | |
| } | |
| }, | |
| { | |
| "type": "symbol", | |
| "from": { | |
| "data": "tree" | |
| }, | |
| "encode": { | |
| "enter": { | |
| "x": { | |
| "field": "x" | |
| }, | |
| "y": { | |
| "field": "y" | |
| } | |
| } | |
| } | |
| }, | |
| { | |
| "type": "symbol", | |
| "from": { | |
| "data": "subleafWithPosition" | |
| }, | |
| "encode": { | |
| "enter": { | |
| "x": { | |
| "signal": "datum.subtreeLevel * 800 / 11" | |
| }, | |
| "y": { | |
| "field": "y" | |
| } | |
| } | |
| } | |
| } | |
| ] | |
| } |
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Small Error! Data item 'tree's source should be 'nodes' instead of 'rawData'