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#!/usr/bin/env python
import argparse
import os
import tempfile
import shutil
import json
import dicom
import requests
#!/usr/bin/env python
# -*- coding: utf-8 -*-
import os
import argparse
import json
from glob import glob
import csv
def get_quantification_value(quantDict, roi, side, type):
@micabe
micabe / update_bv
Last active November 10, 2020 09:48
# -*- coding: utf-8 -*-
import brainvisa.axon.processes
brainvisa.axon.processes.initializeProcesses()
context = brainvisa.processes.defaultContext()
def get_databases():
"""Get the list of Brainvisa databases."""
curl -L -O https://repo.continuum.io/miniconda/Miniconda3-4.0.5-Linux-x86_64.sh
chmod +x Miniconda3-4.0.5-Linux-x86_64.sh
./Miniconda3-4.0.5-Linux-x86_64.sh
# Paste this in your .bashrc if it exists replace it
# >>> conda initialize >>>
# !! Contents within this block are managed by 'conda init' !!
__conda_setup="$('$HOME/miniconda3/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
@micabe
micabe / gitconfig
Last active January 19, 2018 10:49
Git config
[user]
name = micabe
email = mickael@qare.io
[color]
ui = auto
[alias]
ac = !git add . && git commit -am
st = status
lg = log -10 --graph --pretty=tformat:'%Cred%h%Creset -%C(auto)%d%Creset %s %Cgreen(%an %ar)%Creset'
ps = push --no-verify