pwolfram’s gists

pwolfram / Makefile

Created June 2, 2020 15:27

pwolfram / oceans11files

Created June 21, 2019 17:34

	src/core_seaice/column/documentation/README:20:http://oceans11.lanl.gov/svn/CICE/branches/column_pkg/source_colpkg.
	src/core_seaice/column/documentation/README:23:http://oceans11.lanl.gov/trac/CICE/attachment/wiki/WikiStart/cicedoc.pdf?format=raw.
	testing_and_setup/compass/landice/Thwaites_variability/4km_varres/standard_configuration/config_setup_model_step.xml:6: <mirror protocol="wget" url="http://oceans11.lanl.gov/mpas_data/mpas_landice/test_cases/"/>
	testing_and_setup/compass/landice/dome/variable_resolution/decomposition_test/config_setup_mesh_step.xml:6: <mirror protocol="wget" url="http://oceans11.lanl.gov/mpas_data/mpas_landice/test_cases/"/>
	testing_and_setup/compass/landice/dome/variable_resolution/halfar_analytic_test/config_setup_mesh_step.xml:6: <mirror protocol="wget" url="http://oceans11.lanl.gov/mpas_data/mpas_landice/test_cases/"/>
	testing_and_setup/compass/landice/dome/variable_resolution/ho_decomposition_test/config_setup_mesh_step.xml:6: <mirro

pwolfram / mpas_for_paraview.sh

Created May 21, 2019 21:30 — forked from bradyrx/mpas_for_paraview.sh

extracts just the needed variables to trigger the Paraview reader to recognize it as an MPAS file

	#!/bin/bash
	GridVars=latCell,lonCell,maxLevelCell,nEdgesOnCell,xCell,yCell,zCell,dcEdge,dvEdge,indexToEdgeID,latEdge,lonEdge,nEdgesOnEdge,xEdge,yEdge,zEdge,areaTriangle,indexToVertexID,latVertex,lonVertex,xVertex,yVertex,zVertex,edgesOnVertex,cellsOnVertex,indexToCellID,indexToEdgeID,indexToVertexID,cellsOnEdge,edgesOnCell,edgesOnEdge,cellsOnCell,refBottomDepth,verticesOnCell,verticesOnEdge,bottomDepth
	ncks -d Time,0 -v ${GridVars} file1.nc file2.nc
	ncks -A -v ${GridVars} mpas_grid.nc mpas_file.nc

pwolfram / namelist.ocean

Created April 12, 2019 21:41

	&run_modes
	config_ocean_run_mode = 'forward'
	/
	&time_management
	config_do_restart = .false.
	config_restart_timestamp_name = 'Restart_timestamp'
	config_start_time = '0001-01-01_00:00:00'
	config_stop_time = 'none'
	config_run_duration = '0001_00:00:01'
	config_calendar_type = 'gregorian_noleap'

pwolfram / animated_particles.py

Created March 4, 2019 15:49

	#! /usr/bin/env python
	"""
	Take an input netcdf database and extract particle information, converting to
	vtu format for input into ParaView.

	Usage exampe:
	./animated_particles.py -f free_floating.nc

	produces

pwolfram / interpolate_grids.py

Created January 31, 2019 15:46

	#!/usr/bin/env python
	"""
	Interpolation of initial conditions from source grid onto a destination grid.

	Currently implementation interpolates

	* temperature
	* salinity
	* layerThickness

pwolfram / a.rb

Created December 24, 2018 21:34

This file has been truncated, but you can view the full file.

	<?xml version="1.0" encoding="UTF-8"?>
	<gpx creator="StravaGPX" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.topografix.com/GPX/1/1 http://www.topografix.com/GPX/1/1/gpx.xsd http://www.garmin.com/xmlschemas/GpxExtensions/v3 http://www.garmin.com/xmlschemas/GpxExtensionsv3.xsd http://www.garmin.com/xmlschemas/TrackPointExtension/v1 http://www.garmin.com/xmlschemas/TrackPointExtensionv1.xsd" version="1.1" xmlns="http://www.topografix.com/GPX/1/1" xmlns:gpxtpx="http://www.garmin.com/xmlschemas/TrackPointExtension/v1" xmlns:gpxx="http://www.garmin.com/xmlschemas/GpxExtensions/v3">
	<metadata>
	<time>2018-12-23T14:41:57Z</time>
	</metadata>
	<trk>
	<name>HR test with polar</name>
	<type>9</type>
	<trkseg>
	<trkpt lat="39.8870700" lon="-105.0340230">

pwolfram / KoppenGeiger.m

Created December 13, 2018 16:44

	function [Class, BroadClass] = KoppenGeiger(T,P) %,classes)
	% [Class, BroadClass] = KoppenGeiger(T,P,classes)
	%
	% Classify monthly temperature and preciptiation climatologies according
	% to the Koppen-Geiger climate classification. The T and P inputs
	% represent the temperature and preciptiation climatologies,
	% respectively. T and P should be provided as three dimensional arrays
	% with the third dimension representing time (12 months). The temperature
	% data should have units degrees Celsius and the precipitation data units
	% mm/month.

pwolfram / forcing_file.py

Created December 11, 2018 22:25

	#!/usr/bin/env python

	import numpy as np
	import scipy as sp
	import xarray as xr
	import netCDF4

	forcing = xr.open_dataset('forcing.nc')

	# build xtime

pwolfram / job_script.lanl.bash

Last active June 21, 2019 22:44

	#!/bin/bash
	#SBATCH --nodes=1
	#SBATCH --time=4:00:00
	#SBATCH --job-name=hurricane_test
	#SBATCH --output=hurricane_test.o%j
	#SBATCH --error=hurricane_test.e%j
	#SBATCH --qos=interactive
	#SBATCH -A w19_mpascoastal
	#SBATCH --mail-user=pwolfram@lanl.gov
	#SBATCH --mail-type=ALL

Phillip J. Wolfram pwolfram