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/* 1. include a file to define the genetic code
Note the use of base directory and path forming variables to make this analysis
independent of directory placement
*/
/*incFileName = HYPHY_LIB_DIRECTORY+"TemplateBatchFiles"+DIRECTORY_SEPARATOR+"TemplateModels"+DIRECTORY_SEPARATOR+"chooseGeneticCode.def"; */
/* ExecuteCommands ("#include \""+incFileName+"\";"); */
/* #include "functions.txt";*/ /*functions.txt has the genetic code*/